File Info
- Filename
- SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1.starfusion.starfusion.fusion_predictions.filtered.tsv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0008_exp0011/B23LG7FLT4/nfcore_rnafusion__e7be3c7a--20260528-111100/starfusion/SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1.starfusion.starfusion.fusion_predictions.filtered.tsv
- Size
- 611.2 KB
- Workflow Run
- dev_rna_exp0008_exp0011-e7be3c7a_b
- Published
- May 28, 2026 6:35 PM
Content
View in new tab| #FusionName | JunctionReadCount | SpanningFragCount | est_J | est_S | SpliceType | LeftGene | LeftBreakpoint | RightGene | RightBreakpoint | JunctionReads | SpanningFrags | LargeAnchorSupport | FFPM | LeftBreakDinuc | LeftBreakEntropy | RightBreakDinuc | RightBreakEntropy | annots | breakpoint_ID | blacklisted | blacklist_reasons | aih_curated_reason | CALL | filter_reason | FILTER | total_reads | ||||
| AC099778.1--AC004943.2 | 59 | 0 | 58.87 | 0.0 | INCL_NON_REF_SPLICE | AC099778.1^ENSG00000260236.1 | chr3:47380520:- | AC004943.2^ENSG00000259768.6 | chr16:72787696:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1102:40148:26488,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1102:7634:26502,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1107:6364:6479,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1108:37324:17478,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1112:43392:28688,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1114:44136:4167,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1118:50988:18165,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1120:31103:14718,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1125:11420:1757,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1127:16201:4545,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1131:47008:20491,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1141:46797:14410,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1144:51368:15208,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1148:38101:1448,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1149:6525:16764,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1166:36596:17366,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1185:34331:3606,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1189:30051:16680,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1207:16193:21066,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1211:10449:11453,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1212:38675:22313,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1224:21079:5288,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1235:2909:14312,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1239:19753:8735,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1263:9017:22229,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1274:51012:3298,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1277:29323:29403,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1309:10821:3662,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1325:12439:19917,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1325:43545:19258,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1326:2141:22901,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1346:28433:26124,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1393:18911:4951,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1403:27535:15349,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1433:46838:6157,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1448:35180:28422,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1448:4576:24933,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1478:24785:2625,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2109:42785:7656,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2124:6946:17969,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2175:41401:7726,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2179:36022:4125,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2224:43820:19426,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2262:20837:3494,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2329:39088:18431,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2330:5733:26797,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1122:49540:5680,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1380:25359:4153,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2124:8491:18740,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2256:5223:27063,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2280:7407:14648,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2291:9317:29193,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2331:22527:26180,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1239:19494:16217,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1289:2909:11986,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1316:18232:19804,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1325:32333:18221,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1342:38343:9099,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1469:50187:14452 | . | NO_LDAS | 0.2008 | GT | 1.9329 | AG | 0.9183 | "[""INTERCHROMOSOMAL[chr3--chr16]""]" | chr3:47380520-chr16:72787696 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 59 | ||||
| HLA-C--MUC16 | 29 | 0 | 29.0 | 0.0 | INCL_NON_REF_SPLICE | HLA-C^ENSG00000204525.17 | chr6:31269489:- | MUC16^ENSG00000181143.15 | chr19:8848985:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1105:9438:14354,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1107:9211:25900,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1120:28223:3929,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1136:32316:18025,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1136:43359:28268,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1154:10668:10935,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1175:49621:28941,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1206:50090:26306,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1219:40325:7824,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1234:37696:22691,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1254:14567:13485,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1273:38530:27189,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1338:42178:6633,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1347:21314:24835,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1395:44306:14802,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1404:4131:16848,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1404:49896:14816,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1433:31459:16400,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2121:6493:21780,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2220:43529:16764,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2220:49702:7810,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2228:12706:26853,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2309:28555:22663,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2340:8685:8230,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1256:11622:20239,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1271:46393:3620,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1371:45382:9660,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2302:24639:14116,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1376:14543:4587 | . | NO_LDAS | 0.0989 | GT | 1.9656 | AG | 1.8062 | "[""GTEx_recurrent_StarF2019"",""INTERCHROMOSOMAL[chr6--chr19]""]" | chr6:31269489-chr19:8848985 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 29 | |||
| AC099778.1--SLC6A8 | 29 | 0 | 28.97 | 0.0 | INCL_NON_REF_SPLICE | AC099778.1^ENSG00000260236.1 | chr3:47380520:- | SLC6A8^ENSG00000130821.17 | chrX:153688033:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1106:33004:14564,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1144:32931:17829,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1144:35018:1406,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1172:3176:14606,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1211:9721:13471,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1227:31362:8413,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1230:18393:29613,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1264:12027:7824,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1272:26168:5526,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1332:10538:8945,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1409:18774:28142,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1463:48165:8258,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1471:41547:16329,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2105:18984:14494,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2180:26006:4601,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2283:30124:26811,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2352:20982:7221,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2368:36960:12224,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2431:27212:25690,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1156:51328:14886,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1184:50689:28884,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1252:5150:3760,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1256:49313:1252,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1313:7302:7011,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1345:17180:18768,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2123:21233:4181,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2280:2327:11397,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1259:2424:10416,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1403:28368:23181 | . | NO_LDAS | 0.0988 | GT | 1.9329 | AG | 0.9183 | "[""INTERCHROMOSOMAL[chr3--chrX]""]" | chr3:47380520-chrX:153688033 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 29 | |||
| NKX6-1--C6orf223 | 26 | 0 | 23.69 | 0.0 | INCL_NON_REF_SPLICE | NKX6-1^ENSG00000163623.10 | chr4:84498077:- | C6orf223^ENSG00000181577.16 | chr6:44002762:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1111:32365:5862,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1118:5959:11215,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1155:35973:2948,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1174:28255:10626,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1182:30415:17703,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1207:17309:15965,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1207:45527:2990,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1230:4762:24891,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1296:41741:11902,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1353:14179:5470,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1438:35852:28884,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2130:9130:11832,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2160:39929:10921,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2214:34266:1953,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2281:38117:16189,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2309:31548:28464,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1163:3791:10935,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1170:44605:15377,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1320:3200:6465,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1487:12908:15461,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2147:31766:4685,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2177:26831:21052,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2222:15764:23826,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2270:6072:4153,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2435:23854:9309,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1184:19114:2864 | . | NO_LDAS | 0.0808 | GT | 0.7219 | AG | 1.231 | "[""INTERCHROMOSOMAL[chr4--chr6]""]" | chr4:84498077-chr6:44002762 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 26 | |||
| ZNF676--KANK3 | 24 | 0 | 23.81 | 0.0 | ONLY_REF_SPLICE | ZNF676^ENSG00000196109.9 | chr19:22193016:- | KANK3^ENSG00000186994.11 | chr19:8325096:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1123:14211:1098,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1137:43157:22649,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1196:36119:16960,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1248:36022:13457,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1282:51943:29039,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1298:46191:29137,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1307:21411:2163,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1314:48472:14508,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1385:30666:10851,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1386:7868:21696,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1434:41701:12532,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1439:45430:28576,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1443:9195:25816,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2180:43222:10374,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2187:22099:12938,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2361:28231:1028,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2363:44201:10416,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2408:44104:14676,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1120:16055:3004,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1130:16242:27848,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1239:37680:16582,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1302:48359:5680,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2262:19850:27007,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1209:19882:13471 | . | YES_LDAS | 0.0812 | GT | 1.8256 | AG | 1.7968 | "[""TumorFusionsNAR2018"",""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr19:13.84Mb]""]" | chr19:22193016-chr19:8325096 | False | 1 | PASS | 24 | |||||||
| TPBG--CARM1 | 22 | 0 | 17.27 | 0.0 | INCL_NON_REF_SPLICE | TPBG^ENSG00000146242.9 | chr6:82365098:+ | CARM1^ENSG00000142453.12 | chr19:10871591:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1125:44128:8413,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1164:45859:13625,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1172:32939:24933,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1214:21476:25227,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1219:20537:13429,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1256:37049:15096,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1260:10093:12070,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1296:42542:17464,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1453:12010:11215,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1487:21314:4657,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2285:35455:8413,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2373:34816:6437,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2479:20926:28674,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2480:23167:20673,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1154:7407:14284,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1158:27584:20253,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1293:51053:28030,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1310:46935:26530,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1472:4503:1182,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2193:9203:5904,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2240:46959:4965,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1398:47234:25984 | . | NO_LDAS | 0.0589 | GT | 1.371 | AG | 0.9183 | "[""INTERCHROMOSOMAL[chr6--chr19]""]" | chr6:82365098-chr19:10871591 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 22 | |||
| KRT1--KRT79 | 22 | 0 | 22.0 | 0.0 | ONLY_REF_SPLICE | KRT1^ENSG00000167768.4 | chr12:52676275:- | KRT79^ENSG00000185640.6 | chr12:52822379:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1107:24267:17927,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1123:37623:2892,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1138:42243:17983,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1143:47987:5708,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1152:32616:9267,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1159:13006:10921,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1305:13734:2681,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1339:2238:24443,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1346:20966:9323,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1390:9527:9407,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1479:2084:3774,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1479:7003:9211,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2114:28102:18431,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2241:7682:14648,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2353:14470:10178,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2444:44063:5414,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2471:24906:19510,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1163:40431:5540,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2353:44273:14354,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2440:3848:3746,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1122:51651:25956,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1181:30496:25325 | . | NO_LDAS | 0.075 | GT | 1.2867 | AG | 1.8062 | "[""DGD_PARALOGS"",""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr12:0.14Mb]""]" | chr12:52676275-chr12:52822379 | False | 0 | Excluded | annotation | pattern: | DGD_PARALOGS | FAIL | 22 | |||
| PARG--BMS1 | 21 | 0 | 21.0 | 0.0 | ONLY_REF_SPLICE | PARG^ENSG00000227345.9 | chr10:49885203:- | BMS1^ENSG00000165733.8 | chr10:42791627:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1101:47606:21276,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1105:38012:10066,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1123:38999:16624,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1151:25780:19594,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1161:24364:12070,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1165:50996:18095,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1170:19203:4727,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1191:10304:3802,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1209:24307:22565,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1285:51045:15741,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1357:15700:5806,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1368:42364:24134,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1457:49459:18123,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1473:38772:2303,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1475:28344:14704,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2108:45147:8945,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2207:42008:22313,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2334:3783:3242,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2383:31888:2850,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1448:38076:3985,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1169:25569:23181 | . | YES_LDAS | 0.0716 | GT | 1.9329 | AG | 1.9329 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr10:6.98Mb]""]" | chr10:49885203-chr10:42791627 | False | 0 | Excluded | annotation | pattern: | GTEx_recurrent_StarF2019 | FAIL | 21 | |||
| BPTF--BSND | 19 | 0 | 19.0 | 0.0 | INCL_NON_REF_SPLICE | BPTF^ENSG00000171634.18 | chr17:67945620:+ | BSND^ENSG00000162399.9 | chr1:55006997:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1102:35698:1631,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1110:25877:3116,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1110:32300:1210,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1115:8985:25367,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1122:23345:20365,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1173:28377:8903,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1179:24663:17829,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1202:8224:2611,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1207:37858:16470,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1219:28919:29571,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1237:45511:5344,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1263:47606:22929,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1272:18402:18726,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1363:13548:5050,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1424:46984:13695,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2102:48432:7039,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2182:1922:14480,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2223:23021:18459,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2324:32001:21318 | . | NO_LDAS | 0.0648 | GT | 1.5628 | AG | 1.4256 | "[""INTERCHROMOSOMAL[chr17--chr1]""]" | chr17:67945620-chr1:55006997 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 19 | |||
| RBM14--RBM4 | 18 | 0 | 18.0 | 0.0 | ONLY_REF_SPLICE | RBM14^ENSG00000239306.5 | chr11:66617057:+ | RBM4^ENSG00000173933.21 | chr11:66639700:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1104:25958:18501,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1123:5085:26825,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1139:25497:20897,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1145:15360:18838,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1149:1858:25606,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1167:50964:21710,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1175:28013:22032,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1185:7351:11299,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1202:27333:19398,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1283:47841:29333,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1354:25666:3172,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1362:36912:20883,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1389:38950:20379,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1413:15659:4475,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1210:36661:19748,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2224:26864:21136,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1105:12180:17787,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1169:46506:13793 | . | YES_LDAS | 0.0614 | GT | 1.7465 | AG | 1.9086 | "[""HGNC_GENEFAM"",""Greger_Normal"",""INTRACHROMOSOMAL[chr11:0.01Mb]"",""NEIGHBORS[8733]""]" | chr11:66617057-chr11:66639700 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 18 | ||||
| PGAP1--BTBD7 | 16 | 0 | 15.75 | 0.0 | INCL_NON_REF_SPLICE | PGAP1^ENSG00000197121.15 | chr2:196926628:- | BTBD7^ENSG00000011114.15 | chr14:93332957:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1130:27867:8328,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1168:49767:29165,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1220:9292:13345,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1268:21767:2163,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1308:16420:15040,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2172:29841:2639,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2191:31386:12070,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1394:40681:6815,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1422:4495:2738,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1496:47598:12322,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2147:9559:23924,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2185:4519:5190,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2193:9810:6143,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2210:26119:22201,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2316:43036:17815,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1303:18127:14017 | . | NO_LDAS | 0.0537 | GT | 1.1589 | AG | 1.1589 | "[""INTERCHROMOSOMAL[chr2--chr14]""]" | chr2:196926628-chr14:93332957 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 16 | ||||
| CBX8--RBM25 | 15 | 0 | 15.0 | 0.0 | INCL_NON_REF_SPLICE | CBX8^ENSG00000141570.11 | chr17:79795264:- | RBM25^ENSG00000119707.14 | chr14:73105901:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1180:30318:22215,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1311:48958:20029,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2276:43011:20323,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2468:45924:16259,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1129:22026:13737,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1214:35989:1911,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1261:37486:17142,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1433:10595:22074,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2113:36976:22509,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2122:23183:21514,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2257:42154:18669,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2268:9745:18726,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2383:21621:21528,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2397:3031:3704,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1255:24898:8370 | . | YES_LDAS | 0.0512 | GT | 1.3383 | AG | 0.9968 | "[""INTERCHROMOSOMAL[chr17--chr14]""]" | chr17:79795264-chr14:73105901 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 15 | |||
| SHROOM1--ABL2 | 14 | 0 | 14.0 | 0.0 | INCL_NON_REF_SPLICE | SHROOM1^ENSG00000164403.15 | chr5:132825435:- | ABL2^ENSG00000143322.21 | chr1:179229668:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1142:28595:19482,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1175:15473:20575,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1204:41596:13079,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1273:22511:25367,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1312:32697:15937,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1375:38408:15909,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1467:10409:7123,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2137:32333:9590,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2139:41911:13709,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2364:45179:22677,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1379:44840:10150,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1426:16120:15363,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2103:16460:13597,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2146:3403:4517 | . | NO_LDAS | 0.0477 | GT | 1.2419 | AG | 1.5546 | "[""INTERCHROMOSOMAL[chr5--chr1]""]" | chr5:132825435-chr1:179229668 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 14 | ||||
| RPS24--PARVA | 9 | 0 | 9.0 | 0.0 | INCL_NON_REF_SPLICE | RPS24^ENSG00000138326.21 | chr10:78040225:+ | PARVA^ENSG00000197702.14 | chr11:12530871:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1237:42769:8637,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1433:4098:23378,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2258:49775:9337,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1101:31054:2948,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1173:36054:20491,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1195:21193:1897,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1233:20327:15727,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2180:45649:23350,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1301:28279:26727 | . | NO_LDAS | 0.0307 | GT | 1.9086 | AG | 1.4295 | "[""INTERCHROMOSOMAL[chr10--chr11]""]" | chr10:78040225-chr11:12530871 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 9 | |||
| LEPROTL1--SMG1P1 | 8 | 0 | 2.67 | 0.0 | ONLY_REF_SPLICE | LEPROTL1^ENSG00000104660.19 | chr8:30104991:+ | SMG1P1^ENSG00000237296.9 | chr16:22451620:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1163:8168:15545,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1196:13022:17647,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1337:51134:22088,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1424:49532:5694,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1440:47340:29053,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2172:37219:28870,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2270:19421:6479,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1333:5967:1224 | . | YES_LDAS | 0.0091 | GC | 1.8892 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr8--chr16]""]" | chr8:30104991-chr16:22451620 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 8 | ||||
| TLK2P1--AC110079.1 | 7 | 0 | 6.4 | 0.0 | INCL_NON_REF_SPLICE | TLK2P1^ENSG00000226049.3 | chr17:34039043:- | AC110079.1^ENSG00000260404.3 | chr4:118595912:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1204:8192:24274,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1292:3524:11257,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1301:50495:26558,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1398:50762:2892,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2385:6663:12826,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1360:23199:2822,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1263:43675:27357 | . | YES_LDAS | 0.0218 | GT | 1.7465 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr17--chr4]""]" | chr17:34039043-chr4:118595912 | False | 0 | Read | count | too | low: | 7 | < | 8 | FAIL | 7 |
| SCLT1--TNNT2 | 7 | 0 | 7.0 | 0.0 | INCL_NON_REF_SPLICE | SCLT1^ENSG00000151466.12 | chr4:128871361:- | TNNT2^ENSG00000118194.20 | chr1:201372038:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1111:27438:29389,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1204:22900:25872,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2145:1493:8889,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2355:48440:28128,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1436:31491:20295,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2220:15441:18305,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1207:45309:4265 | . | NO_LDAS | 0.0239 | GC | 1.2867 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr4--chr1]""]" | chr4:128871361-chr1:201372038 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 7 |
| PGAP1--ADGRB2 | 7 | 0 | 6.24 | 0.0 | INCL_NON_REF_SPLICE | PGAP1^ENSG00000197121.15 | chr2:196926628:- | ADGRB2^ENSG00000121753.13 | chr1:31764130:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1261:12561:8553,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1377:26613:2317,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2123:41321:13023,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1106:48399:16904,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1248:31257:4699,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1267:25812:26124,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1381:40795:5498 | . | YES_LDAS | 0.0213 | GT | 1.1589 | AG | 1.1589 | "[""INTERCHROMOSOMAL[chr2--chr1]""]" | chr2:196926628-chr1:31764130 | False | 0 | Read | count | too | low: | 7 | < | 8 | FAIL | 7 |
| YLPM1--CTBP2 | 6 | 0 | 2.43 | 0.0 | INCL_NON_REF_SPLICE | YLPM1^ENSG00000119596.18 | chr14:74763561:+ | CTBP2^ENSG00000175029.17 | chr10:125160428:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1209:29137:25045,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1249:44322:3144,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2291:28118:13023,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1108:18903:9926,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1372:8564:16652,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2106:26362:29179 | . | NO_LDAS | 0.0083 | GT | 1.2419 | AG | 1.2419 | "[""INTERCHROMOSOMAL[chr14--chr10]""]" | chr14:74763561-chr10:125160428 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 6 | ||||
| UMAD1--GLCCI1 | 6 | 0 | 6.0 | 0.0 | ONLY_REF_SPLICE | UMAD1^ENSG00000219545.11 | chr7:7801743:+ | GLCCI1^ENSG00000106415.13 | chr7:8003908:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1117:31912:8300,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1217:14348:6493,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1262:33409:23784,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1293:9462:6745,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1317:51749:17044,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1365:47420:3354 | . | YES_LDAS | 0.0205 | GT | 1.9656 | AG | 1.7465 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr7:0.00Mb]"",""NEIGHBORS[776]""]" | chr7:7801743-chr7:8003908 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 6 |
| TPPP--BRD9 | 6 | 0 | 6.0 | 0.0 | ONLY_REF_SPLICE | TPPP^ENSG00000171368.12 | chr5:693278:- | BRD9^ENSG00000028310.18 | chr5:879889:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1287:47784:5694,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1447:13677:28870,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1451:25626:24821,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1467:10441:14830,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1474:44977:19020,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2318:41304:6913 | . | YES_LDAS | 0.0205 | GT | 1.8892 | AG | 1.585 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr5:0.16Mb]""]" | chr5:693278-chr5:879889 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 6 |
| HLA-C--NUMA1 | 6 | 0 | 6.0 | 0.0 | INCL_NON_REF_SPLICE | HLA-C^ENSG00000204525.17 | chr6:31269493:- | NUMA1^ENSG00000137497.18 | chr11:72013673:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1167:50066:24022,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1175:41830:25339,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1263:41426:1434,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1346:14082:25031,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2144:50818:8286,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2220:30634:24443 | . | NO_LDAS | 0.0205 | GT | 1.8256 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr6--chr11]""]" | chr6:31269493-chr11:72013673 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 6 |
| YLPM1--LARP1B | 5 | 0 | 5.0 | 0.0 | INCL_NON_REF_SPLICE | YLPM1^ENSG00000119596.18 | chr14:74763561:+ | LARP1B^ENSG00000138709.19 | chr4:128062003:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2371:9495:29109,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1209:4681:3396,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1422:27746:7446,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1246:50956:15082,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1345:30100:19174 | . | NO_LDAS | 0.0171 | GT | 1.2419 | AG | 1.2419 | "[""INTERCHROMOSOMAL[chr14--chr4]""]" | chr14:74763561-chr4:128062003 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 5 | ||||
| RASA4--POLR2J | 5 | 0 | 0.56 | 0.0 | ONLY_REF_SPLICE | RASA4^ENSG00000105808.18 | chr7:102583004:- | POLR2J^ENSG00000005075.15 | chr7:102476270:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1182:8289:20996,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1272:20829:25592,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1356:50681:20323,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1347:16953:1196,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2302:15967:25942 | . | YES_LDAS | 0.0019 | GT | 1.8256 | AG | 1.7465 | "[""INTRACHROMOSOMAL[chr7:0.09Mb]"",""NEIGHBORS[94900]""]" | chr7:102583004-chr7:102476270 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 5 | ||||
| OAZ2--Z98745.1 | 5 | 0 | 3.9 | 0.0 | INCL_NON_REF_SPLICE | OAZ2^ENSG00000180304.14 | chr15:64703219:- | Z98745.1^ENSG00000286819.1 | chr6:28490542:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1163:29477:29277,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1203:7504:11341,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1404:33360:20813,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2107:20958:23742,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1310:1445:14746 | . | NO_LDAS | 0.0133 | GT | 1.3753 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr15--chr6]""]" | chr15:64703219-chr6:28490542 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 5 | ||||
| KRT78--KRT1 | 5 | 0 | 5.0 | 0.0 | ONLY_REF_SPLICE | KRT78^ENSG00000170423.13 | chr12:52848547:- | KRT1^ENSG00000167768.4 | chr12:52678756:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1112:7407:24513,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1404:31613:8931,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1435:37745:15461,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2295:41458:4545,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2307:6210:12154 | . | YES_LDAS | 0.0171 | GT | 1.9329 | AG | 1.7968 | "[""DGD_PARALOGS"",""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr12:0.16Mb]""]" | chr12:52848547-chr12:52678756 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 5 | ||||
| KRT1--KRT77 | 5 | 0 | 5.0 | 0.0 | ONLY_REF_SPLICE | KRT1^ENSG00000167768.4 | chr12:52678542:- | KRT77^ENSG00000189182.10 | chr12:52696430:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1223:14025:23700,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1236:16630:25465,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1241:45398:27679,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1264:36677:7922,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2372:30294:26572 | . | YES_LDAS | 0.0171 | GT | 1.8892 | AG | 1.5656 | "[""DGD_PARALOGS"",""GTEx_recurrent_StarF2019"",""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr12:0.01Mb]"",""LOCAL_REARRANGEMENT:-:[9219]""]" | chr12:52678542-chr12:52696430 | False | 0 | Excluded | annotation | pattern: | GTEx_recurrent_StarF2019 | FAIL | 5 | |||
| CYP4B1--CYP4X1 | 5 | 0 | 5.0 | 0.0 | ONLY_REF_SPLICE | CYP4B1^ENSG00000142973.14 | chr1:46815264:+ | CYP4X1^ENSG00000186377.8 | chr1:47029990:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1132:7367:18445,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1151:41523:9197,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1187:4187:5260,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1460:19469:28758,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2431:11582:28744 | . | YES_LDAS | 0.0171 | GT | 1.9329 | AG | 1.7465 | "[""GTEx_recurrent_StarF2019"",""HGNC_GENEFAM"",""ChimerSeq"",""INTRACHROMOSOMAL[chr1:0.20Mb]""]" | chr1:46815264-chr1:47029990 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 5 |
| TBC1D27P--RPS4X | 4 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | TBC1D27P^ENSG00000128438.10 | chr17:16923225:- | RPS4X^ENSG00000198034.11 | chrX:72272711:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1178:38586:18067,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1268:9325:13653,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1361:8297:19188,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1432:11549:10753 | . | NO_LDAS | 0.0068 | GC | 1.8892 | AG | 1.3383 | "[""INTERCHROMOSOMAL[chr17--chrX]""]" | chr17:16923225-chrX:72272711 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 4 | |||
| ST3GAL4--EGR3 | 4 | 0 | 3.3 | 0.0 | INCL_NON_REF_SPLICE | ST3GAL4^ENSG00000110080.20 | chr11:126355984:+ | EGR3^ENSG00000179388.9 | chr8:22692996:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1497:3532:20155,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2466:32818:6871,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2246:17115:28520,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2380:51465:24401 | . | NO_LDAS | 0.0113 | GT | 1.4716 | AG | 1.4716 | "[""INTERCHROMOSOMAL[chr11--chr8]""]" | chr11:126355984-chr8:22692996 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 4 | ||||
| SPRED2--STARD7 | 4 | 0 | 4.0 | 0.0 | ONLY_REF_SPLICE | SPRED2^ENSG00000198369.10 | chr2:65431962:- | STARD7^ENSG00000084090.14 | chr2:96195549:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1257:12739:8132,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1364:46700:15307,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1367:48181:10472,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2495:4738:26614 | . | NO_LDAS | 0.0136 | GT | 1.4295 | AG | 1.7056 | "[""INTRACHROMOSOMAL[chr2:30.75Mb]""]" | chr2:65431962-chr2:96195549 | False | 0 | Read | count | too | low: | 4 | < | 8 | FAIL | 4 |
| SMBD1P--MUC20 | 4 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | SMBD1P^ENSG00000283426.1 | chr3:195708841:+ | MUC20^ENSG00000176945.17 | chr3:195724680:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2167:4487:24218,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2292:21953:3887,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2321:32066:6016,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2429:4891:18698 | . | YES_LDAS | 0.0068 | GT | 1.8892 | AG | 1.371 | "[""INTRACHROMOSOMAL[chr3:0.01Mb]"",""NEIGHBORS[9241]""]" | chr3:195708841-chr3:195724680 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 4 | ||||
| HLA-J--HLA-W | 4 | 0 | 4.0 | 0.0 | ONLY_REF_SPLICE | HLA-J^ENSG00000204622.11 | chr6:30007593:+ | HLA-W^ENSG00000235290.1 | chr6:29957439:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1169:38942:20505,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2245:16921:9211,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2253:44095:19903,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1434:34371:25816 | . | YES_LDAS | 0.0136 | GT | 1.5628 | AG | 1.5628 | "[""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr6:0.05Mb]"",""LOCAL_REARRANGEMENT:+:[47401]""]" | chr6:30007593-chr6:29957439 | True | "pair|MHC | complexes|HLA-W | HLA-J" | 0 | Blacklisted | FAIL | 4 | |||
| CHCHD10--AC005064.1 | 4 | 0 | 4.0 | 0.0 | INCL_NON_REF_SPLICE | CHCHD10^ENSG00000250479.9 | chr22:23767834:- | AC005064.1^ENSG00000234715.2 | chr7:103446122:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1349:45236:11649,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2217:27802:15727,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2460:33611:28338,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1212:47509:8637 | . | NO_LDAS | 0.0136 | GT | 1.6402 | AG | 1.1589 | "[""INTERCHROMOSOMAL[chr22--chr7]""]" | chr22:23767834-chr7:103446122 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 4 |
| AL109615.3--EGR3 | 4 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | AL109615.3^ENSG00000237686.7 | chr6:44074628:- | EGR3^ENSG00000179388.9 | chr8:22692992:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1102:13192:13905,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2162:14963:21990,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2410:25553:20267,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1191:24946:14172 | . | NO_LDAS | 0.0068 | GT | 1.6402 | AG | 1.1589 | "[""INTERCHROMOSOMAL[chr6--chr8]""]" | chr6:44074628-chr8:22692992 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 4 | ||||
| UNKL--SMURF2 | 3 | 0 | 3.0 | 0.0 | INCL_NON_REF_SPLICE | UNKL^ENSG00000059145.19 | chr16:1401647:- | SMURF2^ENSG00000108854.16 | chr17:64662300:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1473:48068:27091,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1216:50244:10963,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2113:45293:10542 | . | NO_LDAS | 0.0102 | GT | 1.1033 | AG | 1.3753 | "[""INTERCHROMOSOMAL[chr16--chr17]""]" | chr16:1401647-chr17:64662300 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 3 | ||||
| SOCAR--UPK3BL1 | 3 | 0 | 1.5 | 0.0 | ONLY_REF_SPLICE | SOCAR^ENSG00000240350.3 | chr2:111544287:+ | UPK3BL1^ENSG00000267368.1 | chr7:102640773:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1155:15335:6493,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1307:42752:21612,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1147:40406:7964 | . | YES_LDAS | 0.0051 | GT | 1.9086 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr2--chr7]""]" | chr2:111544287-chr7:102640773 | False | 0 | Read | count | too | low: | 3 | < | 8 | FAIL | 3 |
| SNX19--RPS20P14 | 3 | 0 | 1.5 | 0.0 | INCL_NON_REF_SPLICE | SNX19^ENSG00000120451.11 | chr11:130878349:- | RPS20P14^ENSG00000223803.1 | chr3:186900185:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1312:28563:29543,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2207:7852:21388,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1228:14292:16568 | . | NO_LDAS | 0.0051 | GT | 1.8062 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr11--chr3]""]" | chr11:130878349-chr3:186900185 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 3 | ||||
| SETD2--TMEM161A | 3 | 0 | 3.0 | 0.0 | INCL_NON_REF_SPLICE | SETD2^ENSG00000181555.21 | chr3:47164012:- | TMEM161A^ENSG00000064545.15 | chr19:19130271:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1180:34298:22999,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1168:38716:10781,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1348:25642:2962 | . | NO_LDAS | 0.0102 | GT | 0.971 | AG | 1.2419 | "[""INTERCHROMOSOMAL[chr3--chr19]""]" | chr3:47164012-chr19:19130271 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 3 | |||
| SAA4--SAA1 | 3 | 0 | 3.0 | 0.0 | ONLY_REF_SPLICE | SAA4^ENSG00000148965.10 | chr11:18232395:- | SAA1^ENSG00000173432.12 | chr11:18269717:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1182:16759:6493,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1188:23692:6255,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1261:3654:6661 | . | YES_LDAS | 0.0102 | GT | 1.9329 | AG | 1.7819 | "[""DGD_PARALOGS"",""INTRACHROMOSOMAL[chr11:0.03Mb]"",""LOCAL_INVERSION:-:+:[29458]""]" | chr11:18232395-chr11:18269717 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 3 |
| RPL13AP17--RPL13A | 3 | 0 | 0.75 | 0.0 | INCL_NON_REF_SPLICE | RPL13AP17^ENSG00000231322.5 | chr7:78358665:+ | RPL13A^ENSG00000142541.18 | chr19:49491425:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1122:13871:3760,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1326:18523:27623,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2477:20756:20393 | . | NO_LDAS | 0.0026 | GT | 1.6729 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr7--chr19]""]" | chr7:78358665-chr19:49491425 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 3 | ||||
| POLR2J--CRNDE | 3 | 0 | 0.75 | 0.0 | INCL_NON_REF_SPLICE | POLR2J^ENSG00000005075.15 | chr7:102474361:- | CRNDE^ENSG00000245694.10 | chr16:54874140:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1103:1817:13737,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1105:14518:23686,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1239:2796:2962 | . | YES_LDAS | 0.0026 | GT | 1.8295 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr7--chr16]""]" | chr7:102474361-chr16:54874140 | False | 0 | Read | count | too | low: | 3 | < | 8 | FAIL | 3 |
| MED13--MARK2 | 3 | 0 | 3.0 | 0.0 | ONLY_REF_SPLICE | MED13^ENSG00000108510.10 | chr17:62032349:- | MARK2^ENSG00000072518.22 | chr11:63902198:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1114:17471:3830,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1296:48270:3312,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1406:37300:14242 | . | NO_LDAS | 0.0102 | GT | 1.9329 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr17--chr11]""]" | chr17:62032349-chr11:63902198 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 3 | |||
| FXYD6--FXYD2 | 3 | 0 | 3.0 | 0.0 | ONLY_REF_SPLICE | FXYD6^ENSG00000137726.17 | chr11:117839781:- | FXYD2^ENSG00000137731.14 | chr11:117822717:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1156:51635:12840,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1220:21937:1645,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1431:4285:24821 | . | YES_LDAS | 0.0102 | GT | 1.8892 | AG | 1.5219 | "[""ConjoinG"",""INTRACHROMOSOMAL[chr11:0.01Mb]"",""NEIGHBORS[8278]""]" | chr11:117839781-chr11:117822717 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 3 | ||||
| CNTNAP3C--BX005040.4 | 3 | 0 | 3.0 | 0.0 | INCL_NON_REF_SPLICE | CNTNAP3C^ENSG00000283378.1 | chr9:61453030:+ | BX005040.4^ENSG00000283541.1 | chr9:61097036:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1237:35763:20211,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1257:30173:7334,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2224:52096:5120 | . | YES_LDAS | 0.0102 | GT | 1.8295 | AG | 1.8323 | "[""INTRACHROMOSOMAL[chr9:0.22Mb]""]" | chr9:61453030-chr9:61097036 | False | 0 | Read | count | too | low: | 3 | < | 8 | FAIL | 3 |
| AL591742.1--RPL13A | 3 | 0 | 0.75 | 0.0 | INCL_NON_REF_SPLICE | AL591742.1^ENSG00000270780.1 | chr1:114001640:- | RPL13A^ENSG00000142541.18 | chr19:49491425:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1122:13871:3760,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1326:18523:27623,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2477:20756:20393 | . | NO_LDAS | 0.0026 | GT | 1.6729 | AG | 1.7819 | "[""TCGA_StarF2019"",""INTERCHROMOSOMAL[chr1--chr19]""]" | chr1:114001640-chr19:49491425 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 3 | |||
| ACTG1--ACTA2 | 3 | 0 | 3.0 | 0.0 | ONLY_REF_SPLICE | ACTG1^ENSG00000184009.13 | chr17:81511903:- | ACTA2^ENSG00000107796.13 | chr10:88941869:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2409:16509:15867,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1108:45471:16007,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1197:23005:20954 | . | NO_LDAS | 0.0102 | GT | 1.8323 | AG | 1.7465 | "[""GTEx_recurrent_StarF2019"",""INTERCHROMOSOMAL[chr17--chr10]""]" | chr17:81511903-chr10:88941869 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 3 |
| AC138393.1--SEPTIN14 | 3 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC138393.1^ENSG00000229930.1 | chr1:224030704:- | SEPTIN14^ENSG00000154997.9 | chr7:55796092:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2207:40730:21248,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1331:9171:14900,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1193:10134:22901 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr1--chr7]""]" | chr1:224030704-chr7:55796092 | True | aih_curated_blacklist | score(5) | 0 | aih_curated_blacklist | score(5) | FAIL | 3 | |||
| AC044810.2--OVCH2 | 3 | 0 | 3.0 | 0.0 | ONLY_REF_SPLICE | AC044810.2^ENSG00000254951.7 | chr11:7879007:- | OVCH2^ENSG00000183378.12 | chr11:7704674:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1124:8572:26306,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2458:24809:2387,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2253:30901:24485 | . | YES_LDAS | 0.0102 | GT | 1.7056 | AG | 1.8256 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr11:0.05Mb]"",""NEIGHBORS[47972]""]" | chr11:7879007-chr11:7704674 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 3 |
| ABLIM3--PTPRB | 3 | 0 | 3.0 | 0.0 | INCL_NON_REF_SPLICE | ABLIM3^ENSG00000173210.20 | chr5:149251419:+ | PTPRB^ENSG00000127329.16 | chr12:70558894:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1122:23895:6044,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1149:1712:13499,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1420:18790:29319 | . | NO_LDAS | 0.0102 | GT | 1.8295 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr5--chr12]""]" | chr5:149251419-chr12:70558894 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 3 |
| ZNF746--ZNF264 | 2 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZNF746^ENSG00000181220.17 | chr7:149494204:- | ZNF264^ENSG00000083844.10 | chr19:57193875:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1126:34056:23616,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1189:11922:7754 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.7465 | "[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr7--chr19]""]" | chr7:149494204-chr19:57193875 | False | 0 | Excluded | annotation | pattern: | HGNC_GENEFAM | FAIL | 2 | |||
| ZNF720--ZNF254 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | ZNF720^ENSG00000197302.10 | chr16:31723353:+ | ZNF254^ENSG00000213096.11 | chr19:24105940:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1268:2667:17535,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2262:17868:29487 | . | YES_LDAS | 0.0068 | GT | 1.8892 | AG | 1.8892 | "[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr16--chr19]""]" | chr16:31723353-chr19:24105940 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 2 |
| ZNF365--TASOR2 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | ZNF365^ENSG00000138311.18 | chr10:62398777:+ | TASOR2^ENSG00000108021.20 | chr10:5712823:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1122:45260:27890,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1489:18887:14550 | . | YES_LDAS | 0.0068 | GT | 1.9086 | AG | 1.5219 | "[""INTRACHROMOSOMAL[chr10:56.61Mb]""]" | chr10:62398777-chr10:5712823 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 |
| ZKSCAN3--WIPF1 | 2 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ZKSCAN3^ENSG00000189298.14 | chr6:28359940:+ | WIPF1^ENSG00000115935.18 | chr2:174572034:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1450:46992:24246,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2152:38271:21248 | . | NO_LDAS | 0.0034 | GT | 1.1033 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr6--chr2]""]" | chr6:28359940-chr2:174572034 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | ||||
| Z95118.1--RPL37A | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | Z95118.1^ENSG00000231559.1 | chr6:108817819:+ | RPL37A^ENSG00000197756.10 | chr2:216499963:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2210:42534:24204,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1112:47606:23798 | . | YES_LDAS | 0.0068 | GT | 1.6402 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr6--chr2]""]" | chr6:108817819-chr2:216499963 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 2 | |||
| YAP1--DNAJC24 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | YAP1^ENSG00000137693.14 | chr11:102162571:+ | DNAJC24^ENSG00000170946.15 | chr11:31426287:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1110:43594:16820,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1195:15174:25914 | . | NO_LDAS | 0.0068 | GT | 1.9899 | AG | 1.6729 | "[""INTRACHROMOSOMAL[chr11:70.68Mb]""]" | chr11:102162571-chr11:31426287 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 |
| XPO7--SLC39A14 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | XPO7^ENSG00000130227.17 | chr8:21919788:+ | SLC39A14^ENSG00000104635.15 | chr8:22404696:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1356:39824:26572,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1249:27001:21934 | . | NO_LDAS | 0.0068 | GT | 1.9219 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr8:0.36Mb]""]" | chr8:21919788-chr8:22404696 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 |
| VSTM4--NCOA4 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | VSTM4^ENSG00000165633.13 | chr10:49107594:- | NCOA4^ENSG00000266412.6 | chr10:46016694:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1134:24291:24751,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1413:16525:3873 | . | NO_LDAS | 0.0068 | GT | 1.7819 | AG | 1.5628 | "[""INTRACHROMOSOMAL[chr10:2.98Mb]""]" | chr10:49107594-chr10:46016694 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 |
| VSIG10--ZNF638 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | VSIG10^ENSG00000176834.14 | chr12:118068377:- | ZNF638^ENSG00000075292.19 | chr2:71427091:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1204:44621:25409,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2220:23175:8581 | . | NO_LDAS | 0.0068 | GT | 1.9899 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr12--chr2]""]" | chr12:118068377-chr2:71427091 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | ||||
| VAV3--AMMECR1 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | VAV3^ENSG00000134215.16 | chr1:107683488:- | AMMECR1^ENSG00000101935.11 | chrX:110202536:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1115:19858:22789,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1495:21565:1785 | . | NO_LDAS | 0.0068 | GT | 1.9086 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr1--chrX]""]" | chr1:107683488-chrX:110202536 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 |
| UNC5A--BCL11B | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | UNC5A^ENSG00000113763.12 | chr5:176874360:+ | BCL11B^ENSG00000127152.18 | chr14:99175635:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1381:47461:26881,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2287:13143:26600 | . | NO_LDAS | 0.0068 | GT | 1.7465 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr5--chr14]""]" | chr5:176874360-chr14:99175635 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | ||||
| TRPV1--AC092279.1 | 2 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TRPV1^ENSG00000196689.12 | chr17:3571524:- | AC092279.1^ENSG00000268362.6 | chr19:24050943:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1128:48213:15124,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2123:37276:10500 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.4566 | "[""INTERCHROMOSOMAL[chr17--chr19]""]" | chr17:3571524-chr19:24050943 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | ||||
| TRPV1--AC010300.1 | 2 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TRPV1^ENSG00000196689.12 | chr17:3571524:- | AC010300.1^ENSG00000267934.1 | chr19:23326568:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1128:48213:15124,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2123:37276:10500 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.4566 | "[""INTERCHROMOSOMAL[chr17--chr19]""]" | chr17:3571524-chr19:23326568 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | ||||
| TRPM5--EHF | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | TRPM5^ENSG00000070985.13 | chr11:2407803:- | EHF^ENSG00000135373.13 | chr11:34656911:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1109:8127:23658,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1427:26815:5302 | . | NO_LDAS | 0.0068 | GT | 1.7819 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr11:32.20Mb]""]" | chr11:2407803-chr11:34656911 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | ||||
| TRHDE--RBBP7 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | TRHDE^ENSG00000072657.9 | chr12:72272638:+ | RBBP7^ENSG00000102054.18 | chrX:16844626:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1171:16986:20701,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2214:11808:15068 | . | NO_LDAS | 0.0068 | GT | 1.1589 | AG | 0.6998 | "[""INTERCHROMOSOMAL[chr12--chrX]""]" | chr12:72272638-chrX:16844626 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | ||||
| TRAPPC10--SCTR-AS1 | 2 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TRAPPC10^ENSG00000160218.13 | chr21:44089889:+ | SCTR-AS1^ENSG00000231013.2 | chr2:119484992:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1115:45657:21318,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2105:30011:7978 | . | NO_LDAS | 0.0034 | GT | 1.9219 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr21--chr2]""]" | chr21:44089889-chr2:119484992 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | ||||
| TNNT2--BAZ2B | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | TNNT2^ENSG00000118194.20 | chr1:201368162:- | BAZ2B^ENSG00000123636.18 | chr2:159439100:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1126:43028:15363,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1221:23830:18796 | . | NO_LDAS | 0.0068 | GT | 1.5219 | AG | 1.231 | "[""INTERCHROMOSOMAL[chr1--chr2]""]" | chr1:201368162-chr2:159439100 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | ||||
| TMSB4X--COA1 | 2 | 0 | 0.67 | 0.0 | INCL_NON_REF_SPLICE | TMSB4X^ENSG00000205542.11 | chrX:12976069:+ | COA1^ENSG00000106603.19 | chr7:43647099:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1438:32867:21248,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2190:13960:11285 | . | NO_LDAS | 0.0023 | GT | 0.9056 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chrX--chr7]""]" | chrX:12976069-chr7:43647099 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | ||||
| TMEM41B--QSER1 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | TMEM41B^ENSG00000166471.11 | chr11:9314321:- | QSER1^ENSG00000060749.16 | chr11:32927157:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1218:23175:28030,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1312:36046:18123 | . | YES_LDAS | 0.0068 | GT | 1.5656 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr11:23.58Mb]""]" | chr11:9314321-chr11:32927157 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 |
| TCERG1L--ARHGEF7 | 2 | 0 | 0.22 | 0.0 | INCL_NON_REF_SPLICE | TCERG1L^ENSG00000176769.9 | chr10:131311651:- | ARHGEF7^ENSG00000102606.18 | chr13:111115150:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2115:25189:13527,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2183:39322:11860 | . | NO_LDAS | 0.0008 | GC | 1.4716 | AG | 0.8366 | "[""INTERCHROMOSOMAL[chr10--chr13]""]" | chr10:131311651-chr13:111115150 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | ||||
| STYXL1--TMEM120A | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | STYXL1^ENSG00000127952.17 | chr7:75996445:- | TMEM120A^ENSG00000189077.11 | chr7:75992557:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1202:28279:9996,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1175:41321:8230 | . | YES_LDAS | 0.0068 | GT | 1.5656 | AG | 1.8892 | "[""Babiceanu_Normal"",""INTRACHROMOSOMAL[chr7:0.00Mb]"",""NEIGHBORS[1682]""]" | chr7:75996445-chr7:75992557 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 2 | ||||
| STX16--NPEPL1 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | STX16^ENSG00000124222.22 | chr20:58673711:+ | NPEPL1^ENSG00000215440.12 | chr20:58691724:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2140:32098:5568,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2303:45956:26460 | . | YES_LDAS | 0.0068 | GT | 1.7968 | AG | 1.8256 | "[""INTRACHROMOSOMAL[chr20:0.01Mb]"",""NEIGHBORS[9605]""]" | chr20:58673711-chr20:58691724 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 |
| STMN3--DBNDD2 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | STMN3^ENSG00000197457.10 | chr20:63653327:- | DBNDD2^ENSG00000244274.8 | chr20:45408460:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1196:43165:6997,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1466:46579:6381 | . | YES_LDAS | 0.0068 | GT | 1.8295 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr20:18.23Mb]""]" | chr20:63653327-chr20:45408460 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 |
| SREBF1--NCS1 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | SREBF1^ENSG00000072310.17 | chr17:17820287:- | NCS1^ENSG00000107130.10 | chr9:130236709:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1149:13038:27231,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2479:31507:8917 | . | NO_LDAS | 0.0068 | GT | 1.9329 | AG | 1.5546 | "[""INTERCHROMOSOMAL[chr17--chr9]""]" | chr17:17820287-chr9:130236709 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | ||||
| SPG21--LUC7L2 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | SPG21^ENSG00000090487.11 | chr15:64989665:- | LUC7L2^ENSG00000146963.18 | chr7:139398599:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2485:39128:16315,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1453:23134:14424 | . | YES_LDAS | 0.0068 | GT | 1.3996 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr15--chr7]""]" | chr15:64989665-chr7:139398599 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 |
| SP100--CAB39 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | SP100^ENSG00000067066.17 | chr2:230450255:+ | CAB39^ENSG00000135932.11 | chr2:230759959:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1473:16929:1490,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1307:6534:1701 | . | YES_LDAS | 0.0068 | GT | 1.8892 | AG | 1.7465 | "[""INTRACHROMOSOMAL[chr2:0.17Mb]""]" | chr2:230450255-chr2:230759959 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 |
| SNX21--LINC02880 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | SNX21^ENSG00000124104.19 | chr20:45835113:+ | LINC02880^ENSG00000175967.4 | chr6:113917021:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1102:35172:3494,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2152:24259:26488 | . | NO_LDAS | 0.0068 | GT | 1.7232 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr20--chr6]""]" | chr20:45835113-chr6:113917021 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | ||||
| SLC11A2--FYTTD1 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | SLC11A2^ENSG00000110911.17 | chr12:51006174:- | FYTTD1^ENSG00000122068.13 | chr3:197770132:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1190:8588:21542,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1279:51231:22733 | . | YES_LDAS | 0.0068 | GC | 1.9329 | AG | 1.4716 | "[""INTERCHROMOSOMAL[chr12--chr3]""]" | chr12:51006174-chr3:197770132 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 2 | ||||
| SEPTIN14--AP006222.1 | 2 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SEPTIN14^ENSG00000154997.9 | chr7:55795924:- | AP006222.1^ENSG00000228463.10 | chr1:268816:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1154:22697:6100,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1274:28134:8286 | . | NO_LDAS | 0.0034 | GT | 1.5546 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr7--chr1]""]" | chr7:55795924-chr1:268816 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 2 | |||
| SEPTIN14--AP006222.1 | 2 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SEPTIN14^ENSG00000154997.9 | chr7:55795924:- | AP006222.1^ENSG00000228463.10 | chr1:268801:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1154:22697:6100,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1274:28134:8286 | . | NO_LDAS | 0.0034 | GT | 1.5546 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr7--chr1]""]" | chr7:55795924-chr1:268801 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | ||||
| SCAF11--SIRPB2 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | SCAF11^ENSG00000139218.18 | chr12:45926856:- | SIRPB2^ENSG00000196209.13 | chr20:1471090:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1258:25844:16175,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2185:49758:17240 | . | NO_LDAS | 0.0068 | GT | 1.5546 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr12--chr20]""]" | chr12:45926856-chr20:1471090 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | ||||
| RUNX1--NADK2 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | RUNX1^ENSG00000159216.19 | chr21:34859474:- | NADK2^ENSG00000152620.13 | chr5:36227565:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2155:27786:7488,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1122:48869:14214 | . | YES_LDAS | 0.0068 | GT | 1.7819 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr21--chr5]""]" | chr21:34859474-chr5:36227565 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 |
| RRS1--ADHFE1 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | RRS1^ENSG00000179041.4 | chr8:66429536:+ | ADHFE1^ENSG00000147576.17 | chr8:66440162:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1205:46531:10865,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2168:29736:28380 | . | YES_LDAS | 0.0068 | GT | 1.7232 | AG | 1.8892 | "[""ConjoinG"",""INTRACHROMOSOMAL[chr8:0.00Mb]"",""NEIGHBORS[1759]""]" | chr8:66429536-chr8:66440162 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 2 | ||||
| RPTOR--FCHSD2 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | RPTOR^ENSG00000141564.15 | chr17:80893865:+ | FCHSD2^ENSG00000137478.15 | chr11:72921950:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1289:3565:2808,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1302:11226:13835 | . | NO_LDAS | 0.0068 | GT | 1.7465 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr17--chr11]""]" | chr17:80893865-chr11:72921950 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 |
| RPS3--LINC00513 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | RPS3^ENSG00000149273.15 | chr11:75402446:+ | LINC00513^ENSG00000233559.2 | chr7:130915930:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1106:14251:16273,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1217:33748:20589 | . | NO_LDAS | 0.0068 | GT | 1.7465 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr11--chr7]""]" | chr11:75402446-chr7:130915930 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | ||||
| RPL7AP7--AC044787.1 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | RPL7AP7^ENSG00000213880.3 | chr6:29803517:- | AC044787.1^ENSG00000213862.4 | chr15:47730461:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1350:31564:25970,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2267:41588:26685 | . | YES_LDAS | 0.0068 | AT | 1.8323 | AC | 1.9656 | "[""INTERCHROMOSOMAL[chr6--chr15]""]" | chr6:29803517-chr15:47730461 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 |
| RPL37--RPL37P18 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | RPL37^ENSG00000145592.14 | chr5:40834473:- | RPL37P18^ENSG00000229235.1 | chr10:34664003:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2406:1841:8679,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1388:9438:7572 | . | YES_LDAS | 0.0068 | GT | 1.4566 | AG | 1.8892 | "[""TCGA_StarF2019"",""INTERCHROMOSOMAL[chr5--chr10]""]" | chr5:40834473-chr10:34664003 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 2 | ||||
| RPL23AP53--SEPTIN14 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | RPL23AP53^ENSG00000223508.5 | chr8:232129:- | SEPTIN14^ENSG00000154997.9 | chr7:55796092:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1234:19987:3312,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1470:11954:20421 | . | YES_LDAS | 0.0068 | GT | 1.9086 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr8--chr7]""]" | chr8:232129-chr7:55796092 | True | aih_curated_blacklist | score(5) | 0 | aih_curated_blacklist | score(5) | FAIL | 2 | |||
| RPL17--RPL17P12 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | RPL17^ENSG00000265681.7 | chr18:49491405:- | RPL17P12^ENSG00000230559.1 | chr2:146194373:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1262:42065:24008,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2449:18620:7642 | . | NO_LDAS | 0.0068 | GT | 1.9219 | AG | 1.8892 | "[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTERCHROMOSOMAL[chr18--chr2]""]" | chr18:49491405-chr2:146194373 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 2 |
| RPL11--RRM2B | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | RPL11^ENSG00000142676.14 | chr1:23692763:+ | RRM2B^ENSG00000048392.12 | chr8:102206461:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2204:3095:25031,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1344:47129:24429 | . | NO_LDAS | 0.0068 | GT | 1.9329 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr1--chr8]""]" | chr1:23692763-chr8:102206461 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 2 | |||
| RNH1--NRG1 | 2 | 0 | 0.18 | 0.0 | INCL_NON_REF_SPLICE | RNH1^ENSG00000023191.17 | chr11:504432:- | NRG1^ENSG00000157168.20 | chr8:31640281:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1461:36014:26895,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1461:2068:9239 | . | NO_LDAS | 0.0006 | GT | 1.3996 | AG | 1.3383 | "[""INTERCHROMOSOMAL[chr11--chr8]""]" | chr11:504432-chr8:31640281 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | ||||
| RBMS2--AC073264.2 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | RBMS2^ENSG00000076067.13 | chr12:56569996:+ | AC073264.2^ENSG00000230556.1 | chr7:143579062:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1313:18693:12140,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2344:20238:24933 | . | NO_LDAS | 0.0068 | GT | 1.7056 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr12--chr7]""]" | chr12:56569996-chr7:143579062 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | ||||
| RASL10A--PMS2P3 | 2 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RASL10A^ENSG00000100276.10 | chr22:29315205:- | PMS2P3^ENSG00000127957.18 | chr7:75527842:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1137:1073:26012,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2276:51215:19202 | . | NO_LDAS | 0.0034 | GT | 1.5628 | AG | 1.2419 | "[""INTERCHROMOSOMAL[chr22--chr7]""]" | chr22:29315205-chr7:75527842 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | ||||
| RARB--TRAK1 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | RARB^ENSG00000077092.19 | chr3:25174419:+ | TRAK1^ENSG00000182606.17 | chr3:42210096:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1241:14098:14158,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1295:8216:21738 | . | NO_LDAS | 0.0068 | GT | 1.7465 | AG | 0.9183 | "[""INTRACHROMOSOMAL[chr3:16.42Mb]""]" | chr3:25174419-chr3:42210096 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | ||||
| PTPRJ--GALNT2 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | PTPRJ^ENSG00000149177.13 | chr11:47981008:+ | GALNT2^ENSG00000143641.10 | chr1:230178218:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1229:52040:18445,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1344:19583:15811 | . | NO_LDAS | 0.0068 | GT | 1.7056 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chr11--chr1]""]" | chr11:47981008-chr1:230178218 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 |
| PTMAP4--AC026523.4 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | PTMAP4^ENSG00000231503.4 | chr12:9240142:- | AC026523.4^ENSG00000287321.1 | chr15:97560876:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1314:47639:16512,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2201:35374:29263 | . | NO_LDAS | 0.0068 | GT | 1.231 | AG | 1.231 | "[""INTERCHROMOSOMAL[chr12--chr15]""]" | chr12:9240142-chr15:97560876 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | ||||
| PRR11--SCAPER | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | PRR11^ENSG00000068489.13 | chr17:59197789:+ | SCAPER^ENSG00000140386.13 | chr15:76354140:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1423:9187:18207,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1428:50616:29235 | . | NO_LDAS | 0.0068 | GT | 1.7819 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr17--chr15]""]" | chr17:59197789-chr15:76354140 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 |
| PPIG--ALPK3 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | PPIG^ENSG00000138398.17 | chr2:169584603:+ | ALPK3^ENSG00000136383.7 | chr15:84840083:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1381:11274:19272,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1295:36499:10360 | . | NO_LDAS | 0.0068 | GT | 1.6729 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr2--chr15]""]" | chr2:169584603-chr15:84840083 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | ||||
| POLR2J--AC004980.3 | 2 | 0 | 0.67 | 0.0 | INCL_NON_REF_SPLICE | POLR2J^ENSG00000005075.15 | chr7:102474361:- | AC004980.3^ENSG00000230305.2 | chr7:76527766:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1292:28498:25507,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1428:40382:6941 | . | YES_LDAS | 0.0023 | GT | 1.8295 | AG | 1.7465 | "[""INTRACHROMOSOMAL[chr7:25.94Mb]""]" | chr7:102474361-chr7:76527766 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 2 | |||
| PLD4--COL15A1 | 2 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PLD4^ENSG00000166428.14 | chr14:104929431:+ | COL15A1^ENSG00000204291.11 | chr9:98943824:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1215:42704:26320,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1453:19033:21556 | . | NO_LDAS | 0.0034 | GT | 1.6402 | AG | 1.5329 | "[""INTERCHROMOSOMAL[chr14--chr9]""]" | chr14:104929431-chr9:98943824 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | ||||
| PCP4--IGSF5 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | PCP4^ENSG00000183036.11 | chr21:39898527:+ | IGSF5^ENSG00000183067.5 | chr21:39792008:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1385:27592:13961,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2142:31693:20757 | . | YES_LDAS | 0.0068 | GT | 1.9329 | AG | 1.5546 | "[""INTRACHROMOSOMAL[chr21:0.07Mb]"",""LOCAL_REARRANGEMENT:+:[65342]""]" | chr21:39898527-chr21:39792008 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 |
| OR51S1--TP53I11 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | OR51S1^ENSG00000176922.4 | chr11:4848669:- | TP53I11^ENSG00000175274.19 | chr11:44933050:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2194:38942:16357,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2395:41248:22957 | . | NO_LDAS | 0.0068 | GT | 1.8295 | AG | 1.4256 | "[""INTRACHROMOSOMAL[chr11:40.04Mb]""]" | chr11:4848669-chr11:44933050 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 2 | |||
| NRIP2--TLK1 | 2 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | NRIP2^ENSG00000053702.15 | chr12:2827192:- | TLK1^ENSG00000198586.14 | chr2:171006857:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1182:34913:26979,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1227:45082:23069 | . | NO_LDAS | 0.0017 | GT | 1.9086 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr12--chr2]""]" | chr12:2827192-chr2:171006857 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | ||||
| NRIP2--AL589935.3 | 2 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | NRIP2^ENSG00000053702.15 | chr12:2827192:- | AL589935.3^ENSG00000287380.1 | chr6:71239668:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1182:34913:26979,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1227:45082:23069 | . | NO_LDAS | 0.0017 | GT | 1.9086 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr12--chr6]""]" | chr12:2827192-chr6:71239668 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | ||||
| NRG2--MAGED4 | 2 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | NRG2^ENSG00000158458.21 | chr5:139880856:- | MAGED4^ENSG00000154545.16 | chrX:52187034:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1292:24647:25171,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1414:27115:4223 | . | NO_LDAS | 0.0034 | GT | 1.9899 | AG | 1.4566 | "[""INTERCHROMOSOMAL[chr5--chrX]""]" | chr5:139880856-chrX:52187034 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | ||||
| NLRC5--MRC1 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | NLRC5^ENSG00000140853.16 | chr16:57033669:+ | MRC1^ENSG00000260314.3 | chr10:17856342:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1129:15433:21374,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1243:39686:27595 | . | NO_LDAS | 0.0068 | GT | 1.9899 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr16--chr10]""]" | chr16:57033669-chr10:17856342 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | ||||
| NFYC--CSNK1G1 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | NFYC^ENSG00000066136.20 | chr1:40738948:+ | CSNK1G1^ENSG00000169118.18 | chr15:64180454:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1433:13976:12098,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1316:37462:20603 | . | YES_LDAS | 0.0068 | GT | 1.9329 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr1--chr15]""]" | chr1:40738948-chr15:64180454 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 |
| NFATC2IP--SPNS1 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | NFATC2IP^ENSG00000176953.12 | chr16:28952204:+ | SPNS1^ENSG00000169682.18 | chr16:28975101:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1462:44492:14424,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2127:44880:15601 | . | YES_LDAS | 0.0068 | GT | 1.5329 | AG | 1.6402 | "[""Babiceanu_Normal"",""INTRACHROMOSOMAL[chr16:0.01Mb]"",""NEIGHBORS[7124]""]" | chr16:28952204-chr16:28975101 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 2 | ||||
| NEK9--ADGRB2 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | NEK9^ENSG00000119638.14 | chr14:75091434:- | ADGRB2^ENSG00000121753.13 | chr1:31764130:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1327:4309:27133,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1366:45026:7894 | . | NO_LDAS | 0.0068 | GT | 1.053 | AG | 1.1589 | "[""INTERCHROMOSOMAL[chr14--chr1]""]" | chr14:75091434-chr1:31764130 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | ||||
| NDUFB8--SEC31B | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | NDUFB8^ENSG00000166136.16 | chr10:100526399:- | SEC31B^ENSG00000075826.17 | chr10:100509511:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1183:40172:11369,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2164:16492:9674 | . | NO_LDAS | 0.0068 | GT | 1.9329 | AG | 1.9656 | "[""ConjoinG"",""Greger_Normal"",""INTRACHROMOSOMAL[chr10:0.00Mb]"",""NEIGHBORS[3876]""]" | chr10:100526399-chr10:100509511 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 2 | ||||
| NCOR1--AC108156.1 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | NCOR1^ENSG00000141027.21 | chr17:16146495:- | AC108156.1^ENSG00000249752.1 | chr4:149062506:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1173:43400:5386,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2175:43942:12546 | . | NO_LDAS | 0.0068 | GT | 1.5329 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr17--chr4]""]" | chr17:16146495-chr4:149062506 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 2 | |||
| MUC20--SMBD1P | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | MUC20^ENSG00000176945.17 | chr3:195729739:+ | SMBD1P^ENSG00000283426.1 | chr3:195708747:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1102:35180:15671,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1242:2723:13373 | . | YES_LDAS | 0.0068 | GT | 1.8892 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr3:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[9241]""]" | chr3:195729739-chr3:195708747 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 2 |
| MRPL28--PRRC2A | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | MRPL28^ENSG00000086504.17 | chr16:369359:- | PRRC2A^ENSG00000204469.13 | chr6:31629572:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2386:44589:4251,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1101:16800:27777 | . | NO_LDAS | 0.0068 | GT | 1.5628 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr16--chr6]""]" | chr16:369359-chr6:31629572 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | ||||
| MMEL1--NR3C2 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | MMEL1^ENSG00000142606.16 | chr1:2629380:- | NR3C2^ENSG00000151623.15 | chr4:148154857:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2111:3476:6689,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2357:35018:17717 | . | YES_LDAS | 0.0068 | GT | 1.585 | AG | 1.585 | "[""INTERCHROMOSOMAL[chr1--chr4]""]" | chr1:2629380-chr4:148154857 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 |
| MDFIC--ANXA2 | 2 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MDFIC^ENSG00000135272.12 | chr7:114923127:+ | ANXA2^ENSG00000182718.18 | chr15:60386086:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1193:49532:3536,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1195:11096:28941 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr7--chr15]""]" | chr7:114923127-chr15:60386086 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 |
| MALRD1--PLXDC2 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | MALRD1^ENSG00000204740.11 | chr10:19790186:+ | PLXDC2^ENSG00000120594.17 | chr10:20001775:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1237:47429:2359,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1442:8038:16105 | . | YES_LDAS | 0.0068 | GT | 1.8256 | AG | 1.8062 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr10:0.03Mb]"",""NEIGHBORS[25838]""]" | chr10:19790186-chr10:20001775 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 2 |
| LINC01409--C1orf198 | 2 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LINC01409^ENSG00000237491.10 | chr1:779092:+ | C1orf198^ENSG00000119280.17 | chr1:230843896:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2113:37809:16974,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2343:20796:5106 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr1:230.03Mb]""]" | chr1:779092-chr1:230843896 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 |
| LEPROT--LEPR | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | LEPROT^ENSG00000213625.9 | chr1:65425378:+ | LEPR^ENSG00000116678.20 | chr1:65565546:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1124:37890:18936,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2171:18515:7488 | . | YES_LDAS | 0.0068 | GT | 1.8256 | AG | 1.9219 | "[""GTEx_recurrent_StarF2019"",""ChimerSeq"",""INTRACHROMOSOMAL[chr1:0.09Mb]"",""NEIGHBORS[89682]""]" | chr1:65425378-chr1:65565546 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 2 |
| LCE2A--LNPK | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | LCE2A^ENSG00000187173.4 | chr1:152699091:+ | LNPK^ENSG00000144320.14 | chr2:176002254:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1137:38991:2766,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1309:41644:16414 | . | NO_LDAS | 0.0068 | GT | 1.7465 | AG | 1.5656 | "[""INTERCHROMOSOMAL[chr1--chr2]""]" | chr1:152699091-chr2:176002254 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | ||||
| LAMA2--UVRAG | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | LAMA2^ENSG00000196569.13 | chr6:128883357:+ | UVRAG^ENSG00000198382.9 | chr11:75979911:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1495:50551:17969,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2208:13208:25311 | . | NO_LDAS | 0.0068 | GT | 1.7465 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr6--chr11]""]" | chr6:128883357-chr11:75979911 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | ||||
| KRT75--KRT127P | 2 | 0 | 0.67 | 0.0 | ONLY_REF_SPLICE | KRT75^ENSG00000170454.6 | chr12:52433807:- | KRT127P^ENSG00000257125.1 | chr12:52753520:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1185:9503:12028,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1309:23717:4363 | . | NO_LDAS | 0.0023 | GT | 1.9329 | AG | 1.7465 | "[""INTRACHROMOSOMAL[chr12:0.32Mb]""]" | chr12:52433807-chr12:52753520 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 2 | ||||
| KRT17P1--SSH1 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | KRT17P1^ENSG00000131885.17 | chr17:16843667:- | SSH1^ENSG00000084112.15 | chr12:108787839:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1422:33732:2709,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1143:42065:17254 | . | NO_LDAS | 0.0068 | GT | 1.4566 | AG | 1.5329 | "[""INTERCHROMOSOMAL[chr17--chr12]""]" | chr17:16843667-chr12:108787839 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | ||||
| KMT5AP1--TM9SF3 | 2 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | KMT5AP1^ENSG00000279730.2 | chr13:18297739:+ | TM9SF3^ENSG00000077147.16 | chr10:96586877:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1111:10724:12658,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1206:36232:8188 | . | NO_LDAS | 0.0034 | GT | 0.9183 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr13--chr10]""]" | chr13:18297739-chr10:96586877 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | ||||
| KLK11--PRSS30P | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | KLK11^ENSG00000167757.14 | chr19:51023092:- | PRSS30P^ENSG00000172460.17 | chr16:2839931:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2254:28021:24597,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1298:22608:25367 | . | NO_LDAS | 0.0068 | GT | 1.9329 | AG | 1.5546 | "[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr19--chr16]""]" | chr19:51023092-chr16:2839931 | False | 0 | Excluded | annotation | pattern: | HGNC_GENEFAM | FAIL | 2 | |||
| KLF5--CHFR | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | KLF5^ENSG00000102554.14 | chr13:73059588:+ | CHFR^ENSG00000072609.18 | chr12:132859128:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1201:21694:4335,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1249:7877:20645 | . | NO_LDAS | 0.0068 | GT | 1.8892 | AG | 1.5628 | "[""INTERCHROMOSOMAL[chr13--chr12]""]" | chr13:73059588-chr12:132859128 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | ||||
| KHDRBS2--XYLT1 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | KHDRBS2^ENSG00000112232.10 | chr6:62286025:- | XYLT1^ENSG00000103489.12 | chr16:17470925:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1333:12172:9393,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1384:25877:13737 | . | YES_LDAS | 0.0068 | GC | 1.3996 | AG | 0.8366 | "[""INTERCHROMOSOMAL[chr6--chr16]""]" | chr6:62286025-chr16:17470925 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 |
| KDM7A--MKRN1 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | KDM7A^ENSG00000006459.11 | chr7:140176744:- | MKRN1^ENSG00000133606.11 | chr7:140472011:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2214:31305:1168,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1177:23353:10570 | . | YES_LDAS | 0.0068 | GT | 1.9086 | AG | 1.7465 | "[""INTRACHROMOSOMAL[chr7:0.28Mb]""]" | chr7:140176744-chr7:140472011 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 2 | ||||
| JAZF1--SEPTIN7 | 2 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | JAZF1^ENSG00000153814.13 | chr7:27895220:- | SEPTIN7^ENSG00000122545.20 | chr7:35863552:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1230:39832:10612,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1375:2230:6829 | . | YES_LDAS | 0.0017 | GT | 1.8062 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr7:7.62Mb]""]" | chr7:27895220-chr7:35863552 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 |
| HMOX2--PHF19 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | HMOX2^ENSG00000103415.12 | chr16:4505610:+ | PHF19^ENSG00000119403.15 | chr9:120862989:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1171:28223:23378,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2249:49330:4391 | . | NO_LDAS | 0.0068 | GT | 1.6895 | AG | 1.5058 | "[""INTERCHROMOSOMAL[chr16--chr9]""]" | chr16:4505610-chr9:120862989 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | ||||
| HMGN2--GPC1 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | HMGN2^ENSG00000198830.11 | chr1:26472627:+ | GPC1^ENSG00000063660.9 | chr2:240459030:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1101:24000:13093,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1297:6501:29137 | . | YES_LDAS | 0.0068 | GT | 1.7465 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr1--chr2]""]" | chr1:26472627-chr2:240459030 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 |
| HIPK2--LMBR1 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | HIPK2^ENSG00000064393.16 | chr7:139777605:- | LMBR1^ENSG00000105983.22 | chr7:156836885:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2152:50770:9604,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1387:25480:12995 | . | YES_LDAS | 0.0068 | GT | 1.8892 | AG | 1.5546 | "[""INTRACHROMOSOMAL[chr7:16.89Mb]""]" | chr7:139777605-chr7:156836885 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 |
| H2AC18--H2AC8 | 2 | 0 | 0.25 | 0.0 | INCL_NON_REF_SPLICE | H2AC18^ENSG00000203812.2 | chr1:149842404:- | H2AC8^ENSG00000277075.2 | chr6:26217234:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1192:4090:14144,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1461:38036:15321 | . | NO_LDAS | 0.0009 | GC | 1.9656 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr1--chr6]""]" | chr1:149842404-chr6:26217234 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | ||||
| GSDMA--LINC01735 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | GSDMA^ENSG00000167914.12 | chr17:39966437:+ | LINC01735^ENSG00000261453.2 | chr1:208612778:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1216:22762:28632,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2354:19000:3144 | . | NO_LDAS | 0.0068 | GT | 1.7465 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chr17--chr1]""]" | chr17:39966437-chr1:208612778 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | ||||
| GPM6B--DMD | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | GPM6B^ENSG00000046653.15 | chrX:13938507:- | DMD^ENSG00000198947.17 | chrX:32699293:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1162:16897:19286,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1447:32842:23756 | . | YES_LDAS | 0.0068 | GT | 1.9656 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chrX:17.16Mb]""]" | chrX:13938507-chrX:32699293 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 |
| GNPTG--CDC42EP1 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | GNPTG^ENSG00000090581.10 | chr16:1352306:+ | CDC42EP1^ENSG00000128283.7 | chr22:37566072:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2247:51724:19356,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2441:6032:3550 | . | YES_LDAS | 0.0068 | GT | 1.7819 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr16--chr22]""]" | chr16:1352306-chr22:37566072 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 |
| GARS1-DT--KIAA0825 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | GARS1-DT^ENSG00000196295.12 | chr7:30561466:- | KIAA0825^ENSG00000185261.14 | chr5:94154124:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1161:21452:1056,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1164:4196:22117 | . | YES_LDAS | 0.0068 | GT | 1.9329 | AG | 1.4295 | "[""INTERCHROMOSOMAL[chr7--chr5]""]" | chr7:30561466-chr5:94154124 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 |
| FBXW2--PSMD5 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | FBXW2^ENSG00000119402.17 | chr9:120787769:- | PSMD5^ENSG00000095261.14 | chr9:120821464:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1156:14834:5736,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2273:27195:6689 | . | YES_LDAS | 0.0068 | GT | 1.9656 | AG | 1.9899 | "[""INTRACHROMOSOMAL[chr9:0.02Mb]"",""LOCAL_REARRANGEMENT:-:[22080]""]" | chr9:120787769-chr9:120821464 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 |
| FBXW11--UBTD2 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | FBXW11^ENSG00000072803.18 | chr5:172006458:- | UBTD2^ENSG00000168246.6 | chr5:172234358:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1393:44985:16315,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2416:25367:20757 | . | YES_LDAS | 0.0068 | GT | 1.9656 | AG | 1.8892 | "[""DEEPEST2019"",""INTRACHROMOSOMAL[chr5:0.20Mb]""]" | chr5:172006458-chr5:172234358 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 |
| FADS1--TMEM258 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | FADS1^ENSG00000149485.19 | chr11:61801867:- | TMEM258^ENSG00000134825.16 | chr11:61790602:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1260:44484:24611,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2439:23612:6675 | . | NO_LDAS | 0.0068 | GT | 1.7465 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr11:0.01Mb]"",""NEIGHBORS[6825]""]" | chr11:61801867-chr11:61790602 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 2 | ||||
| EIPR1--TRAPPC12 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | EIPR1^ENSG00000032389.13 | chr2:3377648:- | TRAPPC12^ENSG00000171853.16 | chr2:3401777:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1260:5587:22929,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2427:43052:24821 | . | YES_LDAS | 0.0068 | GT | 1.8295 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr2:0.00Mb]"",""LOCAL_INVERSION:-:+:[1845]""]" | chr2:3377648-chr2:3401777 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 |
| DYSF--SEMA4A | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | DYSF^ENSG00000135636.14 | chr2:71564160:+ | SEMA4A^ENSG00000196189.13 | chr1:156156363:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1273:32502:24485,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2105:20740:26586 | . | NO_LDAS | 0.0068 | GT | 1.5656 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr2--chr1]""]" | chr2:71564160-chr1:156156363 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | ||||
| DYRK1B--MRPL17 | 2 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DYRK1B^ENSG00000105204.14 | chr19:39826007:- | MRPL17^ENSG00000158042.9 | chr11:6682230:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2219:5611:21738,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2238:49912:9828 | . | NO_LDAS | 0.0034 | GT | 1.3383 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr19--chr11]""]" | chr19:39826007-chr11:6682230 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | ||||
| DTX2P1--DTX1 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | DTX2P1^ENSG00000186704.9 | chr7:77002321:+ | DTX1^ENSG00000135144.7 | chr12:113095325:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2279:29679:19034,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2304:44087:20253 | . | NO_LDAS | 0.0068 | GT | 1.8892 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr7--chr12]""]" | chr7:77002321-chr12:113095325 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 |
| DNAJB6--TAGLN3 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | DNAJB6^ENSG00000105993.15 | chr7:157410501:+ | TAGLN3^ENSG00000144834.14 | chr3:111999552:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1332:26467:10304,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1413:49864:10052 | . | NO_LDAS | 0.0068 | GT | 0.9056 | AG | 1.053 | "[""INTERCHROMOSOMAL[chr7--chr3]""]" | chr7:157410501-chr3:111999552 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | ||||
| DBP--TRAK1 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | DBP^ENSG00000105516.11 | chr19:48635580:- | TRAK1^ENSG00000182606.17 | chr3:42210102:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1275:20723:12014,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1421:46636:2359 | . | NO_LDAS | 0.0068 | GT | 1.4295 | AG | 0.9183 | "[""INTERCHROMOSOMAL[chr19--chr3]""]" | chr19:48635580-chr3:42210102 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | ||||
| DBP--TRAK1 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | DBP^ENSG00000105516.11 | chr19:48635580:- | TRAK1^ENSG00000182606.17 | chr3:42210090:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1306:47501:16189,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1301:5838:13415 | . | NO_LDAS | 0.0068 | GT | 1.4295 | AG | 0.9183 | "[""INTERCHROMOSOMAL[chr19--chr3]""]" | chr19:48635580-chr3:42210090 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | ||||
| CTDSPL--CDCP1 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | CTDSPL^ENSG00000144677.15 | chr3:37862278:+ | CDCP1^ENSG00000163814.8 | chr3:45118621:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1383:36434:18123,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2111:18361:21346 | . | YES_LDAS | 0.0068 | GT | 1.4566 | AG | 1.8062 | "[""INTRACHROMOSOMAL[chr3:7.10Mb]""]" | chr3:37862278-chr3:45118621 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 |
| CRACDL--PTPRA | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | CRACDL^ENSG00000196872.12 | chr2:98935938:- | PTPRA^ENSG00000132670.20 | chr20:2923207:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1461:11719:14690,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1440:25399:10612 | . | NO_LDAS | 0.0068 | GT | 1.8295 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr2--chr20]""]" | chr2:98935938-chr20:2923207 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 |
| CPT1A--AL133342.1 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | CPT1A^ENSG00000110090.13 | chr11:68793315:- | AL133342.1^ENSG00000278231.1 | chr20:48822017:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1147:6048:7950,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2316:37987:19889 | . | NO_LDAS | 0.0068 | GT | 1.4295 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr11--chr20]""]" | chr11:68793315-chr20:48822017 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | ||||
| CNTNAP3--TTC39B | 2 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CNTNAP3^ENSG00000106714.17 | chr9:39132932:- | TTC39B^ENSG00000155158.20 | chr9:15168646:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1224:27762:1532,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2101:31338:4923 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr9:23.77Mb]""]" | chr9:39132932-chr9:15168646 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 |
| CNTNAP3--LINC02501 | 2 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CNTNAP3^ENSG00000106714.17 | chr9:39132932:- | LINC02501^ENSG00000249882.2 | chr4:31522291:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1224:27762:1532,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2101:31338:4923 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr9--chr4]""]" | chr9:39132932-chr4:31522291 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 |
| CHFR--ANKLE2 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | CHFR^ENSG00000072609.18 | chr12:132945621:- | ANKLE2^ENSG00000176915.15 | chr12:132730270:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1322:39306:11523,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2175:11040:1995 | . | YES_LDAS | 0.0068 | GT | 1.9656 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr12:0.06Mb]"",""NEIGHBORS[60355]""]" | chr12:132945621-chr12:132730270 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 |
| CDC42EP1--SPSB3 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | CDC42EP1^ENSG00000128283.7 | chr22:37568362:+ | SPSB3^ENSG00000162032.16 | chr16:1778080:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1274:47372:14648,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2377:24971:15194 | . | NO_LDAS | 0.0068 | GT | 1.7465 | AG | 1.2419 | "[""INTERCHROMOSOMAL[chr22--chr16]""]" | chr22:37568362-chr16:1778080 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | ||||
| CBLC--VASP | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | CBLC^ENSG00000142273.13 | chr19:44794281:+ | VASP^ENSG00000125753.14 | chr19:45517663:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1242:14850:12042,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2417:4171:27035 | . | NO_LDAS | 0.0068 | GT | 1.8256 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr19:0.71Mb]""]" | chr19:44794281-chr19:45517663 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 |
| CASZ1--AC068867.1 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | CASZ1^ENSG00000130940.15 | chr1:10693874:- | AC068867.1^ENSG00000259217.2 | chr15:35774801:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1324:18135:13135,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2392:3524:18459 | . | NO_LDAS | 0.0068 | GT | 1.9329 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chr1--chr15]""]" | chr1:10693874-chr15:35774801 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 |
| CACUL1--PREX1 | 2 | 0 | 0.4 | 0.0 | INCL_NON_REF_SPLICE | CACUL1^ENSG00000151893.15 | chr10:118754599:- | PREX1^ENSG00000124126.14 | chr20:48636609:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2124:29881:8959,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1275:42081:5428 | . | NO_LDAS | 0.0014 | GC | 1.6402 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chr10--chr20]""]" | chr10:118754599-chr20:48636609 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | ||||
| CA12--TRAPPC8 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | CA12^ENSG00000074410.14 | chr15:63346530:- | TRAPPC8^ENSG00000153339.15 | chr18:31916424:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2122:11428:23238,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1221:11986:18039 | . | NO_LDAS | 0.0068 | GT | 1.9656 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr15--chr18]""]" | chr15:63346530-chr18:31916424 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | ||||
| C9orf92--BNC2 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | C9orf92^ENSG00000205549.10 | chr9:16400420:- | BNC2^ENSG00000173068.18 | chr9:16437524:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1288:25586:16175,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1497:4390:7179 | . | YES_LDAS | 0.0068 | GT | 1.8892 | AG | 1.9219 | "[""INTRACHROMOSOMAL[chr9:0.00Mb]"",""NEIGHBORS_OVERLAP:-:-:[1487]""]" | chr9:16400420-chr9:16437524 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 |
| C22orf34--UPK3BL1 | 2 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | C22orf34^ENSG00000188511.12 | chr22:49657405:- | UPK3BL1^ENSG00000267368.1 | chr7:102640773:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1113:23676:8160,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2237:12965:6927 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr22--chr7]""]" | chr22:49657405-chr7:102640773 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 |
| BMS1P1--PTPN20 | 2 | 0 | 0.67 | 0.0 | ONLY_REF_SPLICE | BMS1P1^ENSG00000204177.10 | chr10:46798168:+ | PTPN20^ENSG00000204179.10 | chr10:46940623:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1108:14688:23616,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1324:16646:26362 | . | YES_LDAS | 0.0023 | GT | 1.7465 | AG | 1.8062 | "[""INTRACHROMOSOMAL[chr10:0.10Mb]"",""NEIGHBORS[99407]""]" | chr10:46798168-chr10:46940623 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 2 | ||||
| BCL11B--SMG1P1 | 2 | 0 | 0.67 | 0.0 | ONLY_REF_SPLICE | BCL11B^ENSG00000127152.18 | chr14:99257471:- | SMG1P1^ENSG00000237296.9 | chr16:22451620:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1281:32600:14452,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1350:30690:2709 | . | NO_LDAS | 0.0023 | GT | 1.8323 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr14--chr16]""]" | chr14:99257471-chr16:22451620 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 |
| BAIAP2L1--AC008494.3 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | BAIAP2L1^ENSG00000006453.14 | chr7:98320275:- | AC008494.3^ENSG00000271797.1 | chr5:115262616:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1221:25488:5750,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1202:12633:7726 | . | NO_LDAS | 0.0068 | GT | 1.8323 | AG | 1.2419 | "[""INTERCHROMOSOMAL[chr7--chr5]""]" | chr7:98320275-chr5:115262616 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | ||||
| B2M--GEMIN4 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | B2M^ENSG00000166710.21 | chr15:44711613:+ | GEMIN4^ENSG00000179409.11 | chr17:748032:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1292:20683:27918,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1165:35779:29235 | . | NO_LDAS | 0.0068 | GT | 1.9656 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr15--chr17]""]" | chr15:44711613-chr17:748032 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 |
| ATP9B--CEP192 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | ATP9B^ENSG00000166377.20 | chr18:79069529:+ | CEP192^ENSG00000101639.18 | chr18:13048859:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1277:22034:19328,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2404:7771:20435 | . | NO_LDAS | 0.0068 | GT | 1.5656 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr18:65.94Mb]""]" | chr18:79069529-chr18:13048859 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 |
| ATP5MG--KMT2A | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | ATP5MG^ENSG00000167283.8 | chr11:118401717:+ | KMT2A^ENSG00000118058.23 | chr11:118468775:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1119:1154:8244,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2294:46409:8244 | . | YES_LDAS | 0.0068 | GT | 1.7968 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr11:0.00Mb]"",""NEIGHBORS[4994]""]" | chr11:118401717-chr11:118468775 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 2 | ||||
| ART4--ST7L | 2 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | ART4^ENSG00000111339.12 | chr12:14826917:- | ST7L^ENSG00000007341.19 | chr1:112523706:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1436:13531:23266,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1318:36580:19776 | . | NO_LDAS | 0.0017 | GC | 1.3383 | AG | 1.5301 | "[""INTERCHROMOSOMAL[chr12--chr1]""]" | chr12:14826917-chr1:112523706 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | ||||
| ANO5--DNM3 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | ANO5^ENSG00000171714.12 | chr11:22193532:+ | DNM3^ENSG00000197959.14 | chr1:172131175:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1131:43084:18684,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1270:45244:28618 | . | YES_LDAS | 0.0068 | GT | 1.6729 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr11--chr1]""]" | chr11:22193532-chr1:172131175 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 |
| AHR--EPHA4 | 2 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AHR^ENSG00000106546.14 | chr7:17299329:+ | EPHA4^ENSG00000116106.12 | chr2:221446166:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1113:14454:18221,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1349:29784:3859 | . | NO_LDAS | 0.0034 | GT | 1.8256 | AG | 1.5546 | "[""INTERCHROMOSOMAL[chr7--chr2]""]" | chr7:17299329-chr2:221446166 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | ||||
| AGPS--PIKFYVE | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | AGPS^ENSG00000018510.18 | chr2:177393049:+ | PIKFYVE^ENSG00000115020.17 | chr2:208312236:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1419:20416:15236,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2212:22503:25409 | . | NO_LDAS | 0.0068 | GT | 1.7819 | AG | 1.6729 | "[""INTRACHROMOSOMAL[chr2:30.70Mb]""]" | chr2:177393049-chr2:208312236 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 |
| ACCS--EXT2 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | ACCS^ENSG00000110455.14 | chr11:44083788:+ | EXT2^ENSG00000151348.15 | chr11:44107683:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1108:28231:8959,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1364:3055:17310 | . | YES_LDAS | 0.0068 | GT | 1.8062 | AG | 1.3996 | "[""Babiceanu_Normal"",""INTRACHROMOSOMAL[chr11:0.01Mb]"",""NEIGHBORS[11436]""]" | chr11:44083788-chr11:44107683 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 2 | ||||
| ACBD3--CEP104 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | ACBD3^ENSG00000182827.9 | chr1:226186422:- | CEP104^ENSG00000116198.14 | chr1:3857103:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1494:28878:20393,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2161:21824:11201 | . | NO_LDAS | 0.0068 | GT | 1.8892 | AG | 1.231 | "[""INTRACHROMOSOMAL[chr1:222.29Mb]""]" | chr1:226186422-chr1:3857103 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | ||||
| AC211476.4--CCDC146 | 2 | 0 | 0.18 | 0.0 | ONLY_REF_SPLICE | AC211476.4^ENSG00000277125.1 | chr7:73069531:+ | CCDC146^ENSG00000135205.15 | chr7:77236947:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1143:22414:21528,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1313:33740:11355 | . | YES_LDAS | 0.0006 | GT | 1.4566 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr7:4.05Mb]""]" | chr7:73069531-chr7:77236947 | True | aih_curated_blacklist | score(5) | 0 | aih_curated_blacklist | score(5) | FAIL | 2 | |||
| AC127502.2--MRPL17 | 2 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC127502.2^ENSG00000270055.1 | chr15:30489369:+ | MRPL17^ENSG00000158042.9 | chr11:6682230:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2219:5611:21738,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2238:49912:9828 | . | NO_LDAS | 0.0034 | GT | 1.3996 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr15--chr11]""]" | chr15:30489369-chr11:6682230 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | ||||
| AC087427.1--SPECC1 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | AC087427.1^ENSG00000286363.1 | chr3:2141251:+ | SPECC1^ENSG00000128487.18 | chr17:20110427:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1297:19817:5064,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2217:7480:18109 | . | YES_LDAS | 0.0068 | GT | 1.8892 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr3--chr17]""]" | chr3:2141251-chr17:20110427 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 |
| AC034236.1--PLA2R1 | 2 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC034236.1^ENSG00000185641.6 | chr5:116052187:- | PLA2R1^ENSG00000153246.13 | chr2:160016709:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1104:45624:17899,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1145:32543:16484 | . | NO_LDAS | 0.0034 | GT | 1.3383 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr5--chr2]""]" | chr5:116052187-chr2:160016709 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 2 | |||
| AC015631.1--SPTLC3 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | AC015631.1^ENSG00000251199.6 | chr4:134103369:- | SPTLC3^ENSG00000172296.13 | chr20:13154003:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1439:2092:22201,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1498:43456:5932 | . | NO_LDAS | 0.0068 | GT | 1.9086 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr4--chr20]""]" | chr4:134103369-chr20:13154003 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 |
| AC008740.1--CRYM-AS1 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | AC008740.1^ENSG00000257403.2 | chr16:21352138:+ | CRYM-AS1^ENSG00000189149.12 | chr16:21338921:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1168:33595:3060,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1185:21233:10430 | . | YES_LDAS | 0.0068 | GT | 1.7232 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr16:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[8102]""]" | chr16:21352138-chr16:21338921 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 2 |
| AC007566.1--SLC38A2 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | AC007566.1^ENSG00000244055.2 | chr7:92492286:+ | SLC38A2^ENSG00000134294.14 | chr12:46362381:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2237:48901:8104,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2151:23684:24653 | . | YES_LDAS | 0.0068 | GT | 1.8892 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr7--chr12]""]" | chr7:92492286-chr12:46362381 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 |
| AC006019.2--EIF3H | 2 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC006019.2^ENSG00000233363.1 | chr7:154095749:- | EIF3H^ENSG00000147677.11 | chr8:116646537:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1424:12601:24513,&SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2218:24259:28002 | . | NO_LDAS | 0.0034 | GT | 1.5219 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr7--chr8]""]" | chr7:154095749-chr8:116646537 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | ||||
| ZSWIM4--GSDMC | 1 | 0 | 0.2 | 0.0 | INCL_NON_REF_SPLICE | ZSWIM4^ENSG00000132003.9 | chr19:13831061:+ | GSDMC^ENSG00000147697.9 | chr8:129751840:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1279:29808:16428 | . | NO_LDAS | 0.0007 | GT | 1.6729 | AG | 1.3753 | "[""INTERCHROMOSOMAL[chr19--chr8]""]" | chr19:13831061-chr8:129751840 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ZSWIM4--AC135048.4 | 1 | 0 | 0.2 | 0.0 | INCL_NON_REF_SPLICE | ZSWIM4^ENSG00000132003.9 | chr19:13831065:+ | AC135048.4^ENSG00000279196.1 | chr16:30985899:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1279:29808:16428 | . | NO_LDAS | 0.0007 | GT | 1.6049 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr19--chr16]""]" | chr19:13831065-chr16:30985899 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ZRSR2--ADH1B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZRSR2^ENSG00000169249.13 | chrX:15804197:+ | ADH1B^ENSG00000196616.14 | chr4:99318886:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1114:13111:15979 | . | YES_LDAS | 0.0034 | GT | 0.8366 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chrX--chr4]""]" | chrX:15804197-chr4:99318886 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| ZNRF2P1--FKBP9 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZNRF2P1^ENSG00000237004.4 | chr7:32729009:+ | FKBP9^ENSG00000122642.11 | chr7:32974617:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1349:48326:28240 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr7:0.20Mb]""]" | chr7:32729009-chr7:32974617 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 |
| ZNF81--CLCN5 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZNF81^ENSG00000197779.15 | chrX:47888125:+ | CLCN5^ENSG00000171365.17 | chrX:50042316:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1467:24987:24471 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chrX:1.92Mb]""]" | chrX:47888125-chrX:50042316 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| ZNF747--USP1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | ZNF747^ENSG00000169955.7 | chr16:30534910:- | USP1^ENSG00000162607.13 | chr1:62436432:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1244:3581:10374 | . | NO_LDAS | 0.0017 | GT | 1.2366 | AG | 1.3383 | "[""INTERCHROMOSOMAL[chr16--chr1]""]" | chr16:30534910-chr1:62436432 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ZNF74--KIAA2026 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ZNF74^ENSG00000185252.19 | chr22:20394377:+ | KIAA2026^ENSG00000183354.12 | chr9:6007782:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1117:3993:10781 | . | NO_LDAS | 0.0034 | GT | 1.6729 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chr22--chr9]""]" | chr22:20394377-chr9:6007782 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ZNF699--ZNF12 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | ZNF699^ENSG00000196110.8 | chr19:9302454:- | ZNF12^ENSG00000164631.19 | chr7:6697757:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1136:22616:27511 | . | YES_LDAS | 0.0017 | GC | 1.7819 | AG | 1.9656 | "[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr19--chr7]""]" | chr19:9302454-chr7:6697757 | False | 0 | Excluded | annotation | pattern: | HGNC_GENEFAM | FAIL | 1 | |||
| ZNF675--NEK4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZNF675^ENSG00000197372.10 | chr19:23662114:- | NEK4^ENSG00000114904.13 | chr3:52749829:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2258:18790:9618 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr19--chr3]""]" | chr19:23662114-chr3:52749829 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| ZNF622--RAP2B | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ZNF622^ENSG00000173545.5 | chr5:16453056:- | RAP2B^ENSG00000181467.5 | chr3:153162649:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1210:6841:3382 | . | NO_LDAS | 0.0034 | GT | 1.7465 | AG | 1.2729 | "[""INTERCHROMOSOMAL[chr5--chr3]""]" | chr5:16453056-chr3:153162649 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ZNF609--SLC5A10 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ZNF609^ENSG00000180357.9 | chr15:64681387:+ | SLC5A10^ENSG00000154025.16 | chr17:19013384:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1293:23603:27735 | . | NO_LDAS | 0.0034 | GT | 1.6895 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr15--chr17]""]" | chr15:64681387-chr17:19013384 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ZNF605--ZNF451 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZNF605^ENSG00000196458.11 | chr12:132933035:- | ZNF451^ENSG00000112200.17 | chr6:57161084:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1107:39104:8146 | . | YES_LDAS | 0.0034 | GT | 1.6402 | AG | 1.8256 | "[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr12--chr6]""]" | chr12:132933035-chr6:57161084 | False | 0 | Excluded | annotation | pattern: | HGNC_GENEFAM | FAIL | 1 | |||
| ZNF605--IP6K2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ZNF605^ENSG00000196458.11 | chr12:132923783:- | IP6K2^ENSG00000068745.15 | chr3:48691482:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1407:51069:14606 | . | NO_LDAS | 0.0034 | GC | 1.2729 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr12--chr3]""]" | chr12:132923783-chr3:48691482 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ZNF569--AC020904.2 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | ZNF569^ENSG00000196437.12 | chr19:37425664:- | AC020904.2^ENSG00000273654.1 | chr19:18030610:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1272:33756:7572 | . | YES_LDAS | 0.0017 | GT | 1.9329 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr19:19.38Mb]""]" | chr19:37425664-chr19:18030610 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| ZNF551--TRPC4AP | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZNF551^ENSG00000204519.11 | chr19:57682244:+ | TRPC4AP^ENSG00000100991.12 | chr20:35021356:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1116:41086:20883 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chr19--chr20]""]" | chr19:57682244-chr20:35021356 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| ZNF544--ZNF606 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZNF544^ENSG00000198131.14 | chr19:58246794:+ | ZNF606^ENSG00000166704.11 | chr19:57988721:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1189:28045:23097 | . | YES_LDAS | 0.0034 | GT | 1.5219 | AG | 1.9656 | "[""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr19:0.23Mb]""]" | chr19:58246794-chr19:57988721 | False | 0 | Excluded | annotation | pattern: | HGNC_GENEFAM | FAIL | 1 | |||
| ZNF443--ZNF208 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZNF443^ENSG00000180855.16 | chr19:12440912:- | ZNF208^ENSG00000160321.15 | chr19:21974807:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1392:51571:7320 | . | NO_LDAS | 0.0034 | GT | 1.6895 | AG | 1.5546 | "[""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr19:9.49Mb]""]" | chr19:12440912-chr19:21974807 | False | 0 | Excluded | annotation | pattern: | HGNC_GENEFAM | FAIL | 1 | |||
| ZNF44--SCAMP4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZNF44^ENSG00000197857.15 | chr19:12294692:- | SCAMP4^ENSG00000227500.10 | chr19:1917694:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1207:12658:23209 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 1.5546 | "[""INTRACHROMOSOMAL[chr19:10.30Mb]""]" | chr19:12294692-chr19:1917694 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| ZNF428--UCK2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ZNF428^ENSG00000131116.12 | chr19:43607934:- | UCK2^ENSG00000143179.16 | chr1:165902794:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2246:22738:28870 | . | NO_LDAS | 0.0034 | GT | 0.8366 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr19--chr1]""]" | chr19:43607934-chr1:165902794 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ZNF385B--DIAPH2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ZNF385B^ENSG00000144331.20 | chr2:179483351:- | DIAPH2^ENSG00000147202.18 | chrX:96735758:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1325:29493:19440 | . | NO_LDAS | 0.0034 | GT | 1.5546 | AG | 1.2419 | "[""INTERCHROMOSOMAL[chr2--chrX]""]" | chr2:179483351-chrX:96735758 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ZNF366--ARHGEF28 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZNF366^ENSG00000178175.12 | chr5:72507251:- | ARHGEF28^ENSG00000214944.9 | chr5:73832338:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2307:13434:1210 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr5:1.12Mb]""]" | chr5:72507251-chr5:73832338 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| ZNF362--IKZF5 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ZNF362^ENSG00000160094.15 | chr1:33281811:+ | IKZF5^ENSG00000095574.12 | chr10:122996004:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2127:35552:16988 | . | NO_LDAS | 0.0034 | GT | 1.5058 | AG | 1.7968 | "[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr1--chr10]""]" | chr1:33281811-chr10:122996004 | False | 0 | Excluded | annotation | pattern: | HGNC_GENEFAM | FAIL | 1 | |||
| ZNF362--GCC1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ZNF362^ENSG00000160094.15 | chr1:33295015:+ | GCC1^ENSG00000179562.3 | chr7:127584865:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1233:16452:6829 | . | NO_LDAS | 0.0034 | GT | 1.6729 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr1--chr7]""]" | chr1:33295015-chr7:127584865 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ZNF33A--MTPAP | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZNF33A^ENSG00000189180.16 | chr10:38017386:+ | MTPAP^ENSG00000107951.15 | chr10:30341640:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1206:49580:19370 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr10:7.64Mb]""]" | chr10:38017386-chr10:30341640 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| ZNF280D--IL17RA | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZNF280D^ENSG00000137871.21 | chr15:56689041:- | IL17RA^ENSG00000177663.14 | chr22:17097062:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2258:19728:1659 | . | YES_LDAS | 0.0034 | GT | 1.6049 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr15--chr22]""]" | chr15:56689041-chr22:17097062 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| ZNF264--ZNF425 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZNF264^ENSG00000083844.10 | chr19:57191946:+ | ZNF425^ENSG00000204947.9 | chr7:149118348:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2194:6202:3844 | . | NO_LDAS | 0.0034 | GT | 1.5219 | AG | 1.8892 | "[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr19--chr7]""]" | chr19:57191946-chr7:149118348 | False | 0 | Excluded | annotation | pattern: | HGNC_GENEFAM | FAIL | 1 | |||
| ZNF254--RPSAP58 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | ZNF254^ENSG00000213096.11 | chr19:24106643:+ | RPSAP58^ENSG00000225178.5 | chr19:23827070:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1459:20505:18473 | . | YES_LDAS | 0.0017 | GT | 1.9329 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr19:0.21Mb]""]" | chr19:24106643-chr19:23827070 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| ZNF251--TC2N | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZNF251^ENSG00000198169.9 | chr8:144753683:- | TC2N^ENSG00000165929.13 | chr14:91813825:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1412:38934:18810 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.2867 | "[""INTERCHROMOSOMAL[chr8--chr14]""]" | chr8:144753683-chr14:91813825 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| ZNF205--AC005379.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ZNF205^ENSG00000122386.11 | chr16:3120292:+ | AC005379.1^ENSG00000267159.2 | chr19:928316:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1468:8694:28983 | . | NO_LDAS | 0.0034 | GC | 0.8366 | AG | 1.5546 | "[""INTERCHROMOSOMAL[chr16--chr19]""]" | chr16:3120292-chr19:928316 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ZNF185--LINC01808 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ZNF185^ENSG00000147394.18 | chrX:152970541:+ | LINC01808^ENSG00000237992.3 | chr2:19519575:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1339:1671:27777 | . | NO_LDAS | 0.0034 | GT | 1.9899 | AG | 1.4256 | "[""INTERCHROMOSOMAL[chrX--chr2]""]" | chrX:152970541-chr2:19519575 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ZNF142--RASSF1 | 1 | 0 | 0.14 | 0.0 | INCL_NON_REF_SPLICE | ZNF142^ENSG00000115568.16 | chr2:218649279:- | RASSF1^ENSG00000068028.17 | chr3:50340778:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2336:9187:9351 | . | NO_LDAS | 0.0005 | GC | 1.8892 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr2--chr3]""]" | chr2:218649279-chr3:50340778 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ZNF124--DCAF6 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZNF124^ENSG00000196418.12 | chr1:247171848:- | DCAF6^ENSG00000143164.15 | chr1:167951800:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2238:26484:3102 | . | YES_LDAS | 0.0034 | GT | 1.6895 | AG | 1.4566 | "[""INTRACHROMOSOMAL[chr1:79.05Mb]""]" | chr1:247171848-chr1:167951800 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| ZMYM4--BCL6 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ZMYM4^ENSG00000146463.12 | chr1:35421663:+ | BCL6^ENSG00000113916.18 | chr3:187729406:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1266:2205:28198 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr1--chr3]""]" | chr1:35421663-chr3:187729406 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ZKSCAN1--TCTN1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZKSCAN1^ENSG00000106261.17 | chr7:100024307:+ | TCTN1^ENSG00000204852.17 | chr12:110626362:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1204:7302:8497 | . | NO_LDAS | 0.0034 | GT | 1.9899 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr7--chr12]""]" | chr7:100024307-chr12:110626362 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| ZIM3--ZNF300 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | ZIM3^ENSG00000141946.1 | chr19:57138472:- | ZNF300^ENSG00000145908.12 | chr5:150898184:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1310:48424:24260 | . | YES_LDAS | 0.0017 | GT | 1.8062 | AG | 1.9656 | "[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr19--chr5]""]" | chr19:57138472-chr5:150898184 | False | 0 | Excluded | annotation | pattern: | HGNC_GENEFAM | FAIL | 1 | |||
| ZFP41--SMIM19 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZFP41^ENSG00000181638.20 | chr8:143251340:+ | SMIM19^ENSG00000176209.12 | chr8:42546469:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1158:1704:5218 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.6895 | "[""INTRACHROMOSOMAL[chr8:100.69Mb]""]" | chr8:143251340-chr8:42546469 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| ZFAT--OXR1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZFAT^ENSG00000066827.16 | chr8:134509619:- | OXR1^ENSG00000164830.19 | chr8:106739458:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1254:22600:9576 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8295 | "[""INTRACHROMOSOMAL[chr8:27.73Mb]""]" | chr8:134509619-chr8:106739458 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| ZFAND3--CASC15 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZFAND3^ENSG00000156639.12 | chr6:38082457:+ | CASC15^ENSG00000272168.8 | chr6:21909470:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1337:4697:4713 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr6:15.17Mb]""]" | chr6:38082457-chr6:21909470 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| ZEB1-AS1--RPS6KA4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZEB1-AS1^ENSG00000237036.5 | chr10:31309893:- | RPS6KA4^ENSG00000162302.13 | chr11:64365301:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1229:12375:11846 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr10--chr11]""]" | chr10:31309893-chr11:64365301 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | ||||
| ZDHHC17--EIF4E | 1 | 0 | 0.33 | 0.0 | ONLY_REF_SPLICE | ZDHHC17^ENSG00000186908.15 | chr12:76769201:+ | EIF4E^ENSG00000151247.13 | chr4:98901982:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2113:33295:20197 | . | YES_LDAS | 0.0011 | GT | 1.9329 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr12--chr4]""]" | chr12:76769201-chr4:98901982 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| ZDHHC14--MMRN1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZDHHC14^ENSG00000175048.17 | chr6:157382266:+ | MMRN1^ENSG00000138722.10 | chr4:89923168:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1126:44459:9267 | . | NO_LDAS | 0.0034 | GT | 1.7056 | AG | 1.5058 | "[""INTERCHROMOSOMAL[chr6--chr4]""]" | chr6:157382266-chr4:89923168 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| ZCCHC17--SCAF8 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZCCHC17^ENSG00000121766.16 | chr1:31348974:+ | SCAF8^ENSG00000213079.10 | chr6:154808070:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1356:3565:6927 | . | YES_LDAS | 0.0034 | GT | 0.8366 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr1--chr6]""]" | chr1:31348974-chr6:154808070 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| ZC3H7B--IP6K1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ZC3H7B^ENSG00000100403.12 | chr22:41332227:+ | IP6K1^ENSG00000176095.12 | chr3:49726738:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2189:39719:8903 | . | YES_LDAS | 0.0034 | GT | 1.8295 | AG | 1.3753 | "[""INTERCHROMOSOMAL[chr22--chr3]""]" | chr22:41332227-chr3:49726738 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| ZC3H14--AL591519.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ZC3H14^ENSG00000100722.20 | chr14:88575940:+ | AL591519.1^ENSG00000287683.1 | chr6:93674690:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1197:23417:8973 | . | NO_LDAS | 0.0034 | GT | 1.8256 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr14--chr6]""]" | chr14:88575940-chr6:93674690 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ZBTB5--LIMD2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ZBTB5^ENSG00000168795.5 | chr9:37465348:- | LIMD2^ENSG00000136490.9 | chr17:63696112:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1487:41361:10626 | . | NO_LDAS | 0.0034 | GT | 1.0389 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr9--chr17]""]" | chr9:37465348-chr17:63696112 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ZADH2--TSHZ1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZADH2^ENSG00000180011.7 | chr18:75208850:- | TSHZ1^ENSG00000179981.11 | chr18:75285448:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1219:21120:4181 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.8892 | "[""ChimerSeq"",""INTRACHROMOSOMAL[chr18:0.00Mb]"",""LOCAL_INVERSION:-:+:[1616]""]" | chr18:75208850-chr18:75285448 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | ||||
| YPEL3--YPEL1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | YPEL3^ENSG00000090238.12 | chr16:30095103:- | YPEL1^ENSG00000100027.17 | chr22:21703478:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1123:40503:16259 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.7232 | "[""GTEx_recurrent_StarF2019"",""INTERCHROMOSOMAL[chr16--chr22]""]" | chr16:30095103-chr22:21703478 | False | 0 | Excluded | annotation | pattern: | GTEx_recurrent_StarF2019 | FAIL | 1 | |||
| YME1L1--SOX7 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | YME1L1^ENSG00000136758.19 | chr10:27147401:- | SOX7^ENSG00000171056.8 | chr8:10725712:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1407:12326:3662 | . | NO_LDAS | 0.0034 | GT | 1.6895 | AG | 1.2419 | "[""INTERCHROMOSOMAL[chr10--chr8]""]" | chr10:27147401-chr8:10725712 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| YAF2--RYBP | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | YAF2^ENSG00000015153.15 | chr12:42238155:- | RYBP^ENSG00000163602.11 | chr3:72446621:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1147:13159:22481 | . | YES_LDAS | 0.0034 | GT | 1.5656 | AG | 1.4566 | "[""INTERCHROMOSOMAL[chr12--chr3]""]" | chr12:42238155-chr3:72446621 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 |
| XYLT1--RNF135 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | XYLT1^ENSG00000103489.12 | chr16:17470434:- | RNF135^ENSG00000181481.14 | chr17:30984617:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2248:1493:18221 | . | NO_LDAS | 0.0034 | GT | 1.3996 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr16--chr17]""]" | chr16:17470434-chr17:30984617 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| XYLB--PLCD1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | XYLB^ENSG00000093217.11 | chr3:38400985:+ | PLCD1^ENSG00000187091.14 | chr3:38020352:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2211:14025:11593 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr3:0.32Mb]""]" | chr3:38400985-chr3:38020352 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| XRN2--ESF1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | XRN2^ENSG00000088930.8 | chr20:21303473:+ | ESF1^ENSG00000089048.15 | chr20:13776270:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1276:37033:4307 | . | YES_LDAS | 0.0034 | GT | 1.6895 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr20:7.52Mb]""]" | chr20:21303473-chr20:13776270 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| XRCC3--QRICH2 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | XRCC3^ENSG00000126215.14 | chr14:103697881:- | QRICH2^ENSG00000129646.15 | chr17:76282115:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2156:10247:23630 | . | NO_LDAS | 0.0017 | GT | 1.8295 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr14--chr17]""]" | chr14:103697881-chr17:76282115 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| XPR1--RAB11B | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | XPR1^ENSG00000143324.14 | chr1:180787854:+ | RAB11B^ENSG00000185236.12 | chr19:8404054:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1141:2052:18067 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr1--chr19]""]" | chr1:180787854-chr19:8404054 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| XDH--FXYD3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | XDH^ENSG00000158125.10 | chr2:31398639:- | FXYD3^ENSG00000089356.18 | chr19:35122918:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1132:46967:1336 | . | NO_LDAS | 0.0034 | GT | 1.9899 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr2--chr19]""]" | chr2:31398639-chr19:35122918 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| WWP2--MEGF8 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | WWP2^ENSG00000198373.13 | chr16:69871865:+ | MEGF8^ENSG00000105429.13 | chr19:42357566:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1114:7407:23896 | . | NO_LDAS | 0.0034 | GT | 1.5656 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr16--chr19]""]" | chr16:69871865-chr19:42357566 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| WWP1--AC010620.2 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | WWP1^ENSG00000123124.14 | chr8:86461846:+ | AC010620.2^ENSG00000269839.1 | chr19:21245238:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1239:25230:11327 | . | YES_LDAS | 0.0011 | GT | 1.8295 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr8--chr19]""]" | chr8:86461846-chr19:21245238 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| WNT4--AL135905.2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | WNT4^ENSG00000162552.15 | chr1:22129616:- | AL135905.2^ENSG00000285976.2 | chr6:63576436:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1175:45163:22032 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr1--chr6]""]" | chr1:22129616-chr6:63576436 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| WNT3A--MCM3AP | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | WNT3A^ENSG00000154342.6 | chr1:228007075:+ | MCM3AP^ENSG00000160294.11 | chr21:46243497:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1341:38465:21388 | . | NO_LDAS | 0.0034 | GC | 0.8366 | AG | 1.5546 | "[""INTERCHROMOSOMAL[chr1--chr21]""]" | chr1:228007075-chr21:46243497 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| WDTC1--KATNAL2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | WDTC1^ENSG00000142784.16 | chr1:27263235:+ | KATNAL2^ENSG00000167216.17 | chr18:46946057:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1211:10457:7039 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr1--chr18]""]" | chr1:27263235-chr18:46946057 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| WDR83--SLC2A1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | WDR83^ENSG00000123154.12 | chr19:12668512:+ | SLC2A1^ENSG00000117394.24 | chr1:42927150:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2179:47429:21584 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr19--chr1]""]" | chr19:12668512-chr1:42927150 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| WDR75--CCAR1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | WDR75^ENSG00000115368.10 | chr2:189455444:+ | CCAR1^ENSG00000060339.14 | chr10:68736876:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1225:1858:17058 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr2--chr10]""]" | chr2:189455444-chr10:68736876 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| WDR5--SLC45A4 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | WDR5^ENSG00000196363.10 | chr9:134158871:+ | SLC45A4^ENSG00000022567.10 | chr8:141212162:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2440:12771:11411 | . | NO_LDAS | 0.0034 | GT | 1.1033 | AG | 1.1033 | "[""INTERCHROMOSOMAL[chr9--chr8]""]" | chr9:134158871-chr8:141212162 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| WDR48--LAMA4 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | WDR48^ENSG00000114742.14 | chr3:39095488:+ | LAMA4^ENSG00000112769.20 | chr6:112148259:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2101:32591:15363 | . | NO_LDAS | 0.0011 | GT | 1.7465 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr3--chr6]""]" | chr3:39095488-chr6:112148259 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| WDR27--TMEM181 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | WDR27^ENSG00000184465.16 | chr6:169672255:- | TMEM181^ENSG00000146433.9 | chr6:158573420:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1130:38060:19959 | . | YES_LDAS | 0.0034 | GT | 1.8295 | AG | 1.7056 | "[""INTRACHROMOSOMAL[chr6:10.82Mb]""]" | chr6:169672255-chr6:158573420 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| WDR13--LINC00898 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | WDR13^ENSG00000101940.18 | chrX:48597725:+ | LINC00898^ENSG00000205634.7 | chr22:47629776:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1196:48181:20253 | . | NO_LDAS | 0.0034 | GT | 1.1033 | AG | 1.4256 | "[""INTERCHROMOSOMAL[chrX--chr22]""]" | chrX:48597725-chr22:47629776 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| WDR1--VEGFA | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | WDR1^ENSG00000071127.17 | chr4:10116282:- | VEGFA^ENSG00000112715.25 | chr6:43771175:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1407:7965:27301 | . | NO_LDAS | 0.0034 | GT | 1.3383 | AG | 1.3996 | "[""INTERCHROMOSOMAL[chr4--chr6]""]" | chr4:10116282-chr6:43771175 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| WDFY2--AC124319.1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | WDFY2^ENSG00000139668.9 | chr13:51584752:+ | AC124319.1^ENSG00000262979.1 | chr17:80316556:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1189:40584:22537 | . | NO_LDAS | 0.0017 | GT | 1.5546 | AG | 1.5058 | "[""INTERCHROMOSOMAL[chr13--chr17]""]" | chr13:51584752-chr17:80316556 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| WASH5P--WASH4P | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | WASH5P^ENSG00000282458.1 | chr19:66346:- | WASH4P^ENSG00000234769.7 | chr16:17750:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2172:5191:8623 | . | YES_LDAS | 0.0017 | GT | 1.9656 | AG | 1.8256 | "[""GTEx_recurrent_StarF2019"",""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr19--chr16]""]" | chr19:66346-chr16:17750 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | ||||
| WASH2P--ELAC2 | 1 | 0 | 0.12 | 0.0 | ONLY_REF_SPLICE | WASH2P^ENSG00000146556.14 | chr2:113598466:+ | ELAC2^ENSG00000006744.19 | chr17:12995812:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1190:11833:28814 | . | NO_LDAS | 0.0004 | GT | 1.8892 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr2--chr17]""]" | chr2:113598466-chr17:12995812 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| WARS1--SLC6A1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | WARS1^ENSG00000140105.18 | chr14:100376056:- | SLC6A1^ENSG00000157103.12 | chr3:10992848:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2213:21427:9029 | . | NO_LDAS | 0.0034 | GT | 1.1033 | AG | 1.231 | "[""INTERCHROMOSOMAL[chr14--chr3]""]" | chr14:100376056-chr3:10992848 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| VPS52--PNPLA8 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | VPS52^ENSG00000223501.9 | chr6:33269490:- | PNPLA8^ENSG00000135241.17 | chr7:108526282:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1183:35674:12966 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr6--chr7]""]" | chr6:33269490-chr7:108526282 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| VPS51--AC068587.1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | VPS51^ENSG00000149823.9 | chr11:65096463:+ | AC068587.1^ENSG00000254581.1 | chr8:12676172:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1154:22608:23462 | . | NO_LDAS | 0.0017 | GT | 1.8892 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr11--chr8]""]" | chr11:65096463-chr8:12676172 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| VPS45--PLEKHO1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | VPS45^ENSG00000136631.15 | chr1:150110627:+ | PLEKHO1^ENSG00000023902.14 | chr1:150150912:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2481:20918:11930 | . | YES_LDAS | 0.0034 | GT | 1.4566 | AG | 1.8892 | "[""Babiceanu_Normal"",""INTRACHROMOSOMAL[chr1:0.00Mb]"",""NEIGHBORS[3854]""]" | chr1:150110627-chr1:150150912 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | ||||
| VPS26C--RAPGEF2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | VPS26C^ENSG00000157538.14 | chr21:37267238:- | RAPGEF2^ENSG00000109756.9 | chr4:159193200:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1141:33117:14984 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr21--chr4]""]" | chr21:37267238-chr4:159193200 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| VPS13C--RORA | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | VPS13C^ENSG00000129003.19 | chr15:62060275:- | RORA^ENSG00000069667.16 | chr15:60511621:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1349:32171:15559 | . | NO_LDAS | 0.0034 | GT | 1.6729 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr15:0.62Mb]""]" | chr15:62060275-chr15:60511621 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| VPS13C--AL592146.2 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | VPS13C^ENSG00000129003.19 | chr15:61929517:- | AL592146.2^ENSG00000286572.1 | chr1:204064609:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1260:42704:3816 | . | NO_LDAS | 0.0017 | GT | 1.8256 | AG | 0.971 | "[""INTERCHROMOSOMAL[chr15--chr1]""]" | chr15:61929517-chr1:204064609 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| VDAC1--FAT2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | VDAC1^ENSG00000213585.11 | chr5:134004647:- | FAT2^ENSG00000086570.12 | chr5:151568951:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1165:12981:18557 | . | NO_LDAS | 0.0034 | GT | 1.9219 | AG | 1.5628 | "[""INTRACHROMOSOMAL[chr5:17.50Mb]""]" | chr5:134004647-chr5:151568951 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| VCL--TCF12 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | VCL^ENSG00000035403.18 | chr10:73998375:+ | TCF12^ENSG00000140262.18 | chr15:57192158:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2264:18402:28002 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr10--chr15]""]" | chr10:73998375-chr15:57192158 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| VAV3--NEK1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | VAV3^ENSG00000134215.16 | chr1:107683488:- | NEK1^ENSG00000137601.17 | chr4:169577079:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1196:11371:12210 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr1--chr4]""]" | chr1:107683488-chr4:169577079 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| VAV3--DOCK7 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | VAV3^ENSG00000134215.16 | chr1:107683488:- | DOCK7^ENSG00000116641.18 | chr1:62586624:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1139:27212:19216 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.5656 | "[""INTRACHROMOSOMAL[chr1:44.88Mb]""]" | chr1:107683488-chr1:62586624 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| VASH2--DUS1L | 1 | 0 | 0.25 | 0.0 | INCL_NON_REF_SPLICE | VASH2^ENSG00000143494.15 | chr1:212951250:+ | DUS1L^ENSG00000169718.18 | chr17:82058890:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1110:40649:1490 | . | NO_LDAS | 0.0009 | GT | 1.053 | AG | 1.3996 | "[""INTERCHROMOSOMAL[chr1--chr17]""]" | chr1:212951250-chr17:82058890 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| VAMP8--VAMP5 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | VAMP8^ENSG00000118640.11 | chr2:85581876:+ | VAMP5^ENSG00000168899.5 | chr2:85591725:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2164:22811:18515 | . | YES_LDAS | 0.0034 | GT | 1.9899 | AG | 1.7819 | "[""ConjoinG"",""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr2:0.00Mb]"",""NEIGHBORS[2400]""]" | chr2:85581876-chr2:85591725 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | ||||
| USP8--SHROOM3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | USP8^ENSG00000138592.14 | chr15:50424514:+ | SHROOM3^ENSG00000138771.16 | chr4:76778809:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1314:32996:8581 | . | YES_LDAS | 0.0034 | GT | 1.5628 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr15--chr4]""]" | chr15:50424514-chr4:76778809 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| USP28--CWF19L2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | USP28^ENSG00000048028.11 | chr11:113875445:- | CWF19L2^ENSG00000152404.15 | chr11:107392895:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1347:42477:25816 | . | YES_LDAS | 0.0034 | GT | 1.7056 | AG | 1.6729 | "[""INTRACHROMOSOMAL[chr11:6.34Mb]""]" | chr11:113875445-chr11:107392895 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| USP15--MCM9 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | USP15^ENSG00000135655.16 | chr12:62260503:+ | MCM9^ENSG00000111877.18 | chr6:118856545:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1326:37162:19552 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr12--chr6]""]" | chr12:62260503-chr6:118856545 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| USF3--ZNF142 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | USF3^ENSG00000176542.10 | chr3:113670141:- | ZNF142^ENSG00000115568.16 | chr2:218658876:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1287:16420:24260 | . | NO_LDAS | 0.0017 | GT | 1.9899 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr3--chr2]""]" | chr3:113670141-chr2:218658876 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| USB1--FAM156A | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | USB1^ENSG00000103005.12 | chr16:58020670:+ | FAM156A^ENSG00000268350.7 | chrX:52948011:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1110:20044:14620 | . | NO_LDAS | 0.0017 | GT | 0.9968 | AG | 1.4295 | "[""INTERCHROMOSOMAL[chr16--chrX]""]" | chr16:58020670-chrX:52948011 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| UQCRB--AL390964.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | UQCRB^ENSG00000156467.10 | chr8:96231774:- | AL390964.1^ENSG00000277047.5 | chr13:54984962:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2450:26726:23420 | . | NO_LDAS | 0.0034 | GT | 1.7232 | AG | 0.9183 | "[""INTERCHROMOSOMAL[chr8--chr13]""]" | chr8:96231774-chr13:54984962 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| UNC13B--DCAF10 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | UNC13B^ENSG00000198722.14 | chr9:35397310:+ | DCAF10^ENSG00000122741.16 | chr9:37842089:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1376:22883:11187 | . | YES_LDAS | 0.0034 | GT | 1.8062 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr9:2.40Mb]""]" | chr9:35397310-chr9:37842089 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| UMAD1--GLCCI1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | UMAD1^ENSG00000219545.11 | chr7:7801757:+ | GLCCI1^ENSG00000106415.13 | chr7:8003908:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1137:21136:24443 | . | YES_LDAS | 0.0034 | GT | 1.6895 | AG | 1.7465 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr7:0.00Mb]"",""NEIGHBORS[776]""]" | chr7:7801757-chr7:8003908 | False | 0 | Excluded | annotation | pattern: | GTEx_recurrent_StarF2019 | FAIL | 1 | |||
| ULK4--FAM71F2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ULK4^ENSG00000168038.11 | chr3:41961922:- | FAM71F2^ENSG00000205085.12 | chr7:128684393:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1139:17091:6255 | . | NO_LDAS | 0.0034 | GT | 1.2419 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr3--chr7]""]" | chr3:41961922-chr7:128684393 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| UHRF2--BLZF1 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | UHRF2^ENSG00000147854.17 | chr9:6493932:+ | BLZF1^ENSG00000117475.14 | chr1:169380481:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1348:3856:3564 | . | NO_LDAS | 0.0017 | GT | 1.5546 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr9--chr1]""]" | chr9:6493932-chr1:169380481 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| UGGT2--GNPTG | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | UGGT2^ENSG00000102595.20 | chr13:96031889:- | GNPTG^ENSG00000090581.10 | chr16:1357700:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1406:36264:9141 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr13--chr16]""]" | chr13:96031889-chr16:1357700 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | ||||
| UGGT2--FBN1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | UGGT2^ENSG00000102595.20 | chr13:95940044:- | FBN1^ENSG00000166147.14 | chr15:48596378:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1163:41782:25816 | . | NO_LDAS | 0.0034 | GT | 1.9899 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr13--chr15]""]" | chr13:95940044-chr15:48596378 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| UBXN6--SYT14 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | UBXN6^ENSG00000167671.12 | chr19:4457615:- | SYT14^ENSG00000143469.20 | chr1:210168883:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1230:39039:14087 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.6729 | "[""INTERCHROMOSOMAL[chr19--chr1]""]" | chr19:4457615-chr1:210168883 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| UBL7--ADARB1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | UBL7^ENSG00000138629.16 | chr15:74449936:- | ADARB1^ENSG00000197381.16 | chr21:45132262:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2285:44702:17675 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr15--chr21]""]" | chr15:74449936-chr21:45132262 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| UBAP2--NUP98 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | UBAP2^ENSG00000137073.23 | chr9:33948374:- | NUP98^ENSG00000110713.17 | chr11:3782145:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1117:38457:10388 | . | NO_LDAS | 0.0034 | GT | 1.8323 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr9--chr11]""]" | chr9:33948374-chr11:3782145 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| U2--ARL4D | 1 | 0 | 0.08 | 0.0 | INCL_NON_REF_SPLICE | U2^ENSG00000278591.1 | chr17:43300005:- | ARL4D^ENSG00000175906.5 | chr17:43399661:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1340:26330:6255 | . | YES_LDAS | 0.0003 | GT | 1.4295 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr17:0.13Mb]""]" | chr17:43300005-chr17:43399661 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| U2--ARL4D | 1 | 0 | 0.08 | 0.0 | INCL_NON_REF_SPLICE | U2^ENSG00000275219.1 | chr17:43296389:- | ARL4D^ENSG00000175906.5 | chr17:43399661:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1340:26330:6255 | . | YES_LDAS | 0.0003 | GT | 1.4295 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr17:0.13Mb]""]" | chr17:43296389-chr17:43399661 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| U2--ARL4D | 1 | 0 | 0.08 | 0.0 | INCL_NON_REF_SPLICE | U2^ENSG00000274452.1 | chr17:43290255:- | ARL4D^ENSG00000175906.5 | chr17:43399661:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1340:26330:6255 | . | YES_LDAS | 0.0003 | GT | 1.4295 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr17:0.13Mb]""]" | chr17:43290255-chr17:43399661 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| U2--ARL4D | 1 | 0 | 0.08 | 0.0 | INCL_NON_REF_SPLICE | U2^ENSG00000274062.1 | chr17:43284103:- | ARL4D^ENSG00000175906.5 | chr17:43399661:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1340:26330:6255 | . | YES_LDAS | 0.0003 | GT | 1.4295 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr17:0.13Mb]""]" | chr17:43284103-chr17:43399661 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| U2--ARL4D | 1 | 0 | 0.08 | 0.0 | INCL_NON_REF_SPLICE | U2^ENSG00000274862.1 | chr17:43277942:- | ARL4D^ENSG00000175906.5 | chr17:43399661:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1340:26330:6255 | . | YES_LDAS | 0.0003 | GT | 1.4295 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr17:0.13Mb]""]" | chr17:43277942-chr17:43399661 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| U2--ARL4D | 1 | 0 | 0.08 | 0.0 | INCL_NON_REF_SPLICE | U2^ENSG00000278774.1 | chr17:43273065:- | ARL4D^ENSG00000175906.5 | chr17:43399661:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1340:26330:6255 | . | YES_LDAS | 0.0003 | GT | 1.4295 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr17:0.13Mb]""]" | chr17:43273065-chr17:43399661 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| U2--ARL4D | 1 | 0 | 0.08 | 0.0 | INCL_NON_REF_SPLICE | U2^ENSG00000277903.1 | chr17:43271333:- | ARL4D^ENSG00000175906.5 | chr17:43399661:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1340:26330:6255 | . | YES_LDAS | 0.0003 | GT | 1.4295 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr17:0.13Mb]""]" | chr17:43271333-chr17:43399661 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| U2--ARL4D | 1 | 0 | 0.08 | 0.0 | INCL_NON_REF_SPLICE | U2^ENSG00000276596.1 | chr17:43266597:- | ARL4D^ENSG00000175906.5 | chr17:43399661:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1340:26330:6255 | . | YES_LDAS | 0.0003 | GT | 1.4295 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr17:0.13Mb]""]" | chr17:43266597-chr17:43399661 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| U2--ARL4D | 1 | 0 | 0.08 | 0.0 | INCL_NON_REF_SPLICE | U2^ENSG00000278048.1 | chr17:43251793:- | ARL4D^ENSG00000175906.5 | chr17:43399661:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1340:26330:6255 | . | YES_LDAS | 0.0003 | GT | 1.4295 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr17:0.13Mb]""]" | chr17:43251793-chr17:43399661 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| U2--ARL4D | 1 | 0 | 0.08 | 0.0 | INCL_NON_REF_SPLICE | U2^ENSG00000274432.1 | chr17:43245638:- | ARL4D^ENSG00000175906.5 | chr17:43399661:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1340:26330:6255 | . | YES_LDAS | 0.0003 | GT | 1.4295 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr17:0.13Mb]""]" | chr17:43245638-chr17:43399661 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| U2--ARL4D | 1 | 0 | 0.08 | 0.0 | INCL_NON_REF_SPLICE | U2^ENSG00000273709.1 | chr17:43241144:- | ARL4D^ENSG00000175906.5 | chr17:43399661:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1340:26330:6255 | . | YES_LDAS | 0.0003 | GT | 1.4295 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr17:0.13Mb]""]" | chr17:43241144-chr17:43399661 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| U2--ARL4D | 1 | 0 | 0.08 | 0.0 | INCL_NON_REF_SPLICE | U2^ENSG00000275616.1 | chr17:43239885:- | ARL4D^ENSG00000175906.5 | chr17:43399661:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1340:26330:6255 | . | YES_LDAS | 0.0003 | GT | 1.4295 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr17:0.13Mb]""]" | chr17:43239885-chr17:43399661 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| TYRP1--LYST | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TYRP1^ENSG00000107165.13 | chr9:12704705:+ | LYST^ENSG00000143669.14 | chr1:235804665:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1282:35957:26657 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr9--chr1]""]" | chr9:12704705-chr1:235804665 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| TYMSOS--EBF1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TYMSOS^ENSG00000176912.5 | chr18:641292:- | EBF1^ENSG00000164330.17 | chr5:159095675:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1467:41312:7207 | . | NO_LDAS | 0.0034 | GT | 1.2729 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr18--chr5]""]" | chr18:641292-chr5:159095675 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| TWIST2--DYSF | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TWIST2^ENSG00000233608.4 | chr2:238848733:+ | DYSF^ENSG00000135636.14 | chr2:71480883:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2148:49985:14606 | . | YES_LDAS | 0.0034 | GT | 1.4295 | AG | 1.2867 | "[""INTRACHROMOSOMAL[chr2:167.16Mb]""]" | chr2:238848733-chr2:71480883 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| TVP23C--CDRT4 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TVP23C^ENSG00000175106.17 | chr17:15503098:- | CDRT4^ENSG00000239704.11 | chr17:15438200:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1384:42793:26755 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.6402 | "[""INTRACHROMOSOMAL[chr17:0.03Mb]"",""NEIGHBORS[26536]""]" | chr17:15503098-chr17:15438200 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| TTTY2B--RPS3AP36 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TTTY2B^ENSG00000212856.6 | chrY:6455997:- | RPS3AP36^ENSG00000214362.2 | chr10:95595083:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1373:39306:12728 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chrY--chr10]""]" | chrY:6455997-chr10:95595083 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| TTN-AS1--MTX2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TTN-AS1^ENSG00000237298.10 | chr2:178537691:+ | MTX2^ENSG00000128654.14 | chr2:176296860:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1342:12973:21710 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr2:2.18Mb]""]" | chr2:178537691-chr2:176296860 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| TTLL7--FCGRT | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TTLL7^ENSG00000137941.17 | chr1:83949865:- | FCGRT^ENSG00000104870.13 | chr19:49524507:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1353:50745:5022 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.6049 | "[""INTERCHROMOSOMAL[chr1--chr19]""]" | chr1:83949865-chr19:49524507 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| TTLL5--TBL1XR1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TTLL5^ENSG00000119685.20 | chr14:75863862:+ | TBL1XR1^ENSG00000177565.18 | chr3:177098541:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2139:38465:11075 | . | YES_LDAS | 0.0034 | GT | 1.5058 | AG | 1.5329 | "[""INTERCHROMOSOMAL[chr14--chr3]""]" | chr14:75863862-chr3:177098541 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| TTLL2--TESC | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TTLL2^ENSG00000120440.15 | chr6:167348953:+ | TESC^ENSG00000088992.18 | chr12:117056886:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1337:13111:3060 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr6--chr12]""]" | chr6:167348953-chr12:117056886 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| TTC3--PXMP4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TTC3^ENSG00000182670.13 | chr21:37197696:+ | PXMP4^ENSG00000101417.12 | chr20:33707969:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2257:11735:27749 | . | YES_LDAS | 0.0034 | GT | 1.053 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr21--chr20]""]" | chr21:37197696-chr20:33707969 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| TTC3--DYNC2H1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TTC3^ENSG00000182670.13 | chr21:37073473:+ | DYNC2H1^ENSG00000187240.16 | chr11:103399663:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1125:12925:5260 | . | YES_LDAS | 0.0034 | GT | 1.5058 | AG | 1.4566 | "[""INTERCHROMOSOMAL[chr21--chr11]""]" | chr21:37073473-chr11:103399663 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| TTC21B--TPK1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TTC21B^ENSG00000123607.16 | chr2:165859842:- | TPK1^ENSG00000196511.14 | chr7:144548602:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1263:30682:16960 | . | YES_LDAS | 0.0034 | GT | 1.9899 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr2--chr7]""]" | chr2:165859842-chr7:144548602 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| TTC21B--ARPC5 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TTC21B^ENSG00000123607.16 | chr2:165899819:- | ARPC5^ENSG00000162704.16 | chr1:183633152:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1189:22503:20982 | . | NO_LDAS | 0.0034 | GT | 1.8062 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr2--chr1]""]" | chr2:165899819-chr1:183633152 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 |
| TTBK2--UBQLN1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | TTBK2^ENSG00000128881.17 | chr15:42920633:- | UBQLN1^ENSG00000135018.14 | chr9:83707705:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1105:39161:28590 | . | NO_LDAS | 0.0017 | GT | 1.1589 | AG | 1.4716 | "[""INTERCHROMOSOMAL[chr15--chr9]""]" | chr15:42920633-chr9:83707705 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| TTBK1--CHMP1A | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TTBK1^ENSG00000146216.13 | chr6:43285943:+ | CHMP1A^ENSG00000131165.16 | chr16:89653923:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1491:36628:7894 | . | NO_LDAS | 0.0034 | GC | 1.8295 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr6--chr16]""]" | chr6:43285943-chr16:89653923 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| TSPYL2--SMURF2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TSPYL2^ENSG00000184205.14 | chrX:53088307:+ | SMURF2^ENSG00000108854.16 | chr17:64662300:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1102:33206:7740 | . | NO_LDAS | 0.0034 | GT | 1.4716 | AG | 1.3753 | "[""INTERCHROMOSOMAL[chrX--chr17]""]" | chrX:53088307-chr17:64662300 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| TSPAN32--AC239809.3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TSPAN32^ENSG00000064201.16 | chr11:2302962:+ | AC239809.3^ENSG00000227733.10 | chr1:148161406:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1143:48294:17563 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.2419 | "[""INTERCHROMOSOMAL[chr11--chr1]""]" | chr11:2302962-chr1:148161406 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| TSIX--HMGN3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TSIX^ENSG00000270641.1 | chrX:73827397:+ | HMGN3^ENSG00000118418.14 | chr6:79202361:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1320:26484:23055 | . | NO_LDAS | 0.0034 | GT | 1.8295 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chrX--chr6]""]" | chrX:73827397-chr6:79202361 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| TRPV4--ZNF107 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TRPV4^ENSG00000111199.12 | chr12:109833350:- | ZNF107^ENSG00000196247.11 | chr7:64707654:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2113:2294:28268 | . | NO_LDAS | 0.0034 | GT | 1.6895 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr12--chr7]""]" | chr12:109833350-chr7:64707654 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| TRPS1--ZNF704 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TRPS1^ENSG00000104447.13 | chr8:115587001:- | ZNF704^ENSG00000164684.13 | chr8:80643129:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1269:29501:4013 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr8:34.53Mb]""]" | chr8:115587001-chr8:80643129 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| TRPM7--SPPL2A | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TRPM7^ENSG00000092439.16 | chr15:50637422:- | SPPL2A^ENSG00000138600.10 | chr15:50722201:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1442:1129:19861 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.8892 | "[""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr15:0.02Mb]"",""LOCAL_REARRANGEMENT:-:[15469]""]" | chr15:50637422-chr15:50722201 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| TRIP12--MFF | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TRIP12^ENSG00000153827.14 | chr2:229829193:- | MFF^ENSG00000168958.20 | chr2:227332419:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2456:3686:29277 | . | NO_LDAS | 0.0034 | GT | 1.8062 | AG | 1.4566 | "[""INTRACHROMOSOMAL[chr2:2.41Mb]""]" | chr2:229829193-chr2:227332419 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| TRIP12--HEATR5B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TRIP12^ENSG00000153827.14 | chr2:229840822:- | HEATR5B^ENSG00000008869.12 | chr2:37075634:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2165:8548:5946 | . | YES_LDAS | 0.0034 | GT | 1.9899 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr2:192.68Mb]""]" | chr2:229840822-chr2:37075634 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| TRIM8--SFXN2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TRIM8^ENSG00000171206.15 | chr10:102656920:+ | SFXN2^ENSG00000156398.13 | chr10:102726612:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2315:46927:22957 | . | YES_LDAS | 0.0034 | GT | 1.5219 | AG | 1.9219 | "[""INTRACHROMOSOMAL[chr10:0.06Mb]"",""NEIGHBORS[56220]""]" | chr10:102656920-chr10:102726612 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| TRIM73--STAG3L1 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | TRIM73^ENSG00000178809.11 | chr7:75395503:+ | STAG3L1^ENSG00000205583.13 | chr7:75385083:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2438:8467:26572 | . | YES_LDAS | 0.0017 | GT | 1.9329 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr7:0.00Mb]"",""NEIGHBORS_OVERLAP:+:+:[320]""]" | chr7:75395503-chr7:75385083 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | ||||
| TRIM52--TMEM245 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TRIM52^ENSG00000183718.5 | chr5:181260001:- | TMEM245^ENSG00000106771.13 | chr9:109038117:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1130:11533:22607 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr5--chr9]""]" | chr5:181260001-chr9:109038117 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| TRIM44--CD244 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TRIM44^ENSG00000166326.7 | chr11:35663460:+ | CD244^ENSG00000122223.13 | chr1:160839109:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1104:51603:14914 | . | NO_LDAS | 0.0034 | GT | 1.2729 | AG | 1.2729 | "[""INTERCHROMOSOMAL[chr11--chr1]""]" | chr11:35663460-chr1:160839109 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| TRIM26--NEXN-AS1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TRIM26^ENSG00000234127.9 | chr6:30186200:- | NEXN-AS1^ENSG00000235927.4 | chr1:77887895:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1106:26071:15923 | . | NO_LDAS | 0.0034 | GT | 0.9968 | AG | 0.9968 | "[""INTERCHROMOSOMAL[chr6--chr1]""]" | chr6:30186200-chr1:77887895 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| TRAK1--CADM2 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | TRAK1^ENSG00000182606.17 | chr3:42223816:+ | CADM2^ENSG00000175161.14 | chr3:86071661:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2291:34112:10711 | . | NO_LDAS | 0.0017 | GT | 1.3383 | AG | 1.4256 | "[""INTRACHROMOSOMAL[chr3:42.73Mb]""]" | chr3:42223816-chr3:86071661 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| TRAF3IP3--RGL1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TRAF3IP3^ENSG00000009790.15 | chr1:209760153:+ | RGL1^ENSG00000143344.16 | chr1:183892077:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1195:13418:3032 | . | NO_LDAS | 0.0034 | GT | 1.8295 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr1:25.83Mb]""]" | chr1:209760153-chr1:183892077 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| TPT1P8--TPT1P9 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TPT1P8^ENSG00000219491.7 | chr8:36888808:+ | TPT1P9^ENSG00000234782.3 | chr9:118083051:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1410:12957:10837 | . | NO_LDAS | 0.0034 | GT | 1.4566 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chr8--chr9]""]" | chr8:36888808-chr9:118083051 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 1 | |||
| TPT1-AS1--ZNF436 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | TPT1-AS1^ENSG00000170919.16 | chr13:45381156:+ | ZNF436^ENSG00000125945.15 | chr1:23363177:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1291:49467:6058 | . | NO_LDAS | 0.0017 | GT | 1.7968 | AG | 1.5656 | "[""INTERCHROMOSOMAL[chr13--chr1]""]" | chr13:45381156-chr1:23363177 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| TPT1-AS1--ZNF436 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | TPT1-AS1^ENSG00000170919.16 | chr13:45379940:+ | ZNF436^ENSG00000125945.15 | chr1:23363177:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1291:49467:6058 | . | NO_LDAS | 0.0017 | GT | 1.7968 | AG | 1.5656 | "[""INTERCHROMOSOMAL[chr13--chr1]""]" | chr13:45379940-chr1:23363177 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| TPST1--LMBR1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TPST1^ENSG00000169902.15 | chr7:66286709:+ | LMBR1^ENSG00000105983.22 | chr7:156826744:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2389:22568:26671 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.7968 | "[""INTRACHROMOSOMAL[chr7:90.25Mb]""]" | chr7:66286709-chr7:156826744 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| TPRG1--RBM4 | 1 | 0 | 0.25 | 0.0 | ONLY_REF_SPLICE | TPRG1^ENSG00000188001.10 | chr3:189310539:+ | RBM4^ENSG00000173933.21 | chr11:66652277:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2179:6485:27399 | . | NO_LDAS | 0.0009 | GT | 1.9086 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr3--chr11]""]" | chr3:189310539-chr11:66652277 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| TPRG1--LINC00265 | 1 | 0 | 0.25 | 0.0 | ONLY_REF_SPLICE | TPRG1^ENSG00000188001.10 | chr3:189310539:+ | LINC00265^ENSG00000188185.13 | chr7:39744292:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2179:6485:27399 | . | NO_LDAS | 0.0009 | GT | 1.9086 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr3--chr7]""]" | chr3:189310539-chr7:39744292 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| TPRG1--FO681492.1 | 1 | 0 | 0.25 | 0.0 | INCL_NON_REF_SPLICE | TPRG1^ENSG00000188001.10 | chr3:189310539:+ | FO681492.1^ENSG00000277758.5 | chr10:47752428:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2179:6485:27399 | . | NO_LDAS | 0.0009 | GT | 1.9086 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr3--chr10]""]" | chr3:189310539-chr10:47752428 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| TPM3--ZXDA | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | TPM3^ENSG00000143549.21 | chr1:154176113:- | ZXDA^ENSG00000198205.7 | chrX:57910066:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1105:32211:3130 | . | NO_LDAS | 0.0011 | GT | 1.5058 | AG | 1.2729 | "[""INTERCHROMOSOMAL[chr1--chrX]""]" | chr1:154176113-chrX:57910066 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| TPM3--KCNT1 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | TPM3^ENSG00000143549.21 | chr1:154176113:- | KCNT1^ENSG00000107147.14 | chr9:135736675:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1105:32211:3130 | . | NO_LDAS | 0.0011 | GT | 1.5058 | AG | 0.9183 | "[""INTERCHROMOSOMAL[chr1--chr9]""]" | chr1:154176113-chr9:135736675 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| TPM3--CAPRIN2 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | TPM3^ENSG00000143549.21 | chr1:154176113:- | CAPRIN2^ENSG00000110888.17 | chr12:30754794:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1105:32211:3130 | . | NO_LDAS | 0.0011 | GT | 1.5058 | AG | 1.2729 | "[""INTERCHROMOSOMAL[chr1--chr12]""]" | chr1:154176113-chr12:30754794 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| TP53TG1--PHF11 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TP53TG1^ENSG00000182165.18 | chr7:87340879:- | PHF11^ENSG00000136147.18 | chr13:49526387:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2166:10951:26054 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr7--chr13]""]" | chr7:87340879-chr13:49526387 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| TP53BP1--ZNF704 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TP53BP1^ENSG00000067369.14 | chr15:43456168:- | ZNF704^ENSG00000164684.13 | chr8:80633699:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2163:42672:25592 | . | NO_LDAS | 0.0034 | GT | 1.3383 | AG | 1.5301 | "[""INTERCHROMOSOMAL[chr15--chr8]""]" | chr15:43456168-chr8:80633699 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| TOP2B--SLC4A7 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TOP2B^ENSG00000077097.15 | chr3:25664229:- | SLC4A7^ENSG00000033867.16 | chr3:27424152:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1125:41515:15573 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.7465 | "[""INTRACHROMOSOMAL[chr3:1.71Mb]""]" | chr3:25664229-chr3:27424152 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| TOP1--FRMD4B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TOP1^ENSG00000198900.7 | chr20:41101353:+ | FRMD4B^ENSG00000114541.15 | chr3:69176656:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1131:8370:11327 | . | YES_LDAS | 0.0034 | GT | 1.9219 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr20--chr3]""]" | chr20:41101353-chr3:69176656 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| TNRC6B--F11R | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TNRC6B^ENSG00000100354.21 | chr22:40251200:+ | F11R^ENSG00000158769.18 | chr1:160999055:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1353:16250:22088 | . | NO_LDAS | 0.0034 | GT | 1.053 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr22--chr1]""]" | chr22:40251200-chr1:160999055 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| TNPO3--DMTN | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TNPO3^ENSG00000064419.13 | chr7:128975819:- | DMTN^ENSG00000158856.18 | chr8:22081945:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2452:25925:4209 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr7--chr8]""]" | chr7:128975819-chr8:22081945 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| TNPO3--AC004980.2 | 1 | 0 | 0.25 | 0.0 | INCL_NON_REF_SPLICE | TNPO3^ENSG00000064419.13 | chr7:129054651:- | AC004980.2^ENSG00000214243.3 | chr7:76650882:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1322:8176:10991 | . | YES_LDAS | 0.0009 | GT | 1.8892 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr7:52.30Mb]""]" | chr7:129054651-chr7:76650882 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| TNNC2--WFDC3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TNNC2^ENSG00000101470.10 | chr20:45823991:- | WFDC3^ENSG00000124116.19 | chr20:45758431:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1229:11533:20561 | . | YES_LDAS | 0.0034 | GT | 1.9899 | AG | 1.5656 | "[""INTRACHROMOSOMAL[chr20:0.03Mb]"",""NEIGHBORS[31282]""]" | chr20:45823991-chr20:45758431 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | ||||
| TMX4--WDR70 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | TMX4^ENSG00000125827.9 | chr20:7982421:- | WDR70^ENSG00000082068.9 | chr5:37396536:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1292:2545:22985 | . | NO_LDAS | 0.0011 | GT | 1.4295 | AG | 1.2729 | "[""INTERCHROMOSOMAL[chr20--chr5]""]" | chr20:7982421-chr5:37396536 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| TMX4--MAGEB2 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | TMX4^ENSG00000125827.9 | chr20:7982421:- | MAGEB2^ENSG00000099399.6 | chrX:30218678:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1292:2545:22985 | . | NO_LDAS | 0.0011 | GT | 1.4295 | AG | 1.2867 | "[""INTERCHROMOSOMAL[chr20--chrX]""]" | chr20:7982421-chrX:30218678 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| TMX1--HNRNPC | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TMX1^ENSG00000139921.13 | chr14:51240444:+ | HNRNPC^ENSG00000092199.18 | chr14:21234229:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2307:32551:26138 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 1.6402 | "[""INTRACHROMOSOMAL[chr14:29.97Mb]""]" | chr14:51240444-chr14:21234229 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| TMPRSS11F--KIAA1191 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TMPRSS11F^ENSG00000198092.6 | chr4:68090523:- | KIAA1191^ENSG00000122203.15 | chr5:176348356:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1259:44783:18011 | . | NO_LDAS | 0.0034 | GT | 1.7465 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr4--chr5]""]" | chr4:68090523-chr5:176348356 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| TMEM94--LDB1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | TMEM94^ENSG00000177728.17 | chr17:75491900:+ | LDB1^ENSG00000198728.11 | chr10:102109392:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2205:9705:28016 | . | NO_LDAS | 0.0017 | GT | 1.5656 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr17--chr10]""]" | chr17:75491900-chr10:102109392 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| TMEM79--AC018737.2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TMEM79^ENSG00000163472.19 | chr1:156292398:+ | AC018737.2^ENSG00000279721.1 | chr2:121689467:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2296:47736:5078 | . | NO_LDAS | 0.0034 | GT | 0.9968 | AG | 1.4295 | "[""INTERCHROMOSOMAL[chr1--chr2]""]" | chr1:156292398-chr2:121689467 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| TMEM45A--RER1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TMEM45A^ENSG00000181458.10 | chr3:100519608:+ | RER1^ENSG00000157916.20 | chr1:2395784:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1290:16428:20015 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr3--chr1]""]" | chr3:100519608-chr1:2395784 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| TMEM45A--LNP1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TMEM45A^ENSG00000181458.10 | chr3:100519608:+ | LNP1^ENSG00000206535.8 | chr3:100451719:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1241:31960:24078 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.4295 | "[""DEEPEST2019"",""TumorFusionsNAR2018"",""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr3:0.04Mb]"",""LOCAL_REARRANGEMENT:+:[36300]""]" | chr3:100519608-chr3:100451719 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| TMEM41B--TLL1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TMEM41B^ENSG00000166471.11 | chr11:9314373:- | TLL1^ENSG00000038295.8 | chr4:165873475:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2317:48480:6227 | . | NO_LDAS | 0.0034 | GC | 1.4716 | AG | 1.3996 | "[""INTERCHROMOSOMAL[chr11--chr4]""]" | chr11:9314373-chr4:165873475 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| TMEM200B--MFSD11 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TMEM200B^ENSG00000253304.2 | chr1:29123856:- | MFSD11^ENSG00000092931.11 | chr17:76738282:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2272:3791:28562 | . | YES_LDAS | 0.0034 | GT | 1.5628 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr1--chr17]""]" | chr1:29123856-chr17:76738282 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| TMEM158--AC022509.1 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | TMEM158^ENSG00000249992.2 | chr3:45225152:- | AC022509.1^ENSG00000255750.6 | chr12:26231678:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2426:2149:6773 | . | NO_LDAS | 0.0011 | GT | 0.971 | AG | 1.2419 | "[""INTERCHROMOSOMAL[chr3--chr12]""]" | chr3:45225152-chr12:26231678 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| TMEM150A--GPRC5B | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TMEM150A^ENSG00000168890.14 | chr2:85599243:- | GPRC5B^ENSG00000167191.12 | chr16:19858834:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1230:11299:6086 | . | YES_LDAS | 0.0034 | AT | 1.6895 | AC | 1.5628 | "[""INTERCHROMOSOMAL[chr2--chr16]""]" | chr2:85599243-chr16:19858834 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| TMEM135--TTC17 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TMEM135^ENSG00000166575.17 | chr11:87302359:+ | TTC17^ENSG00000052841.15 | chr11:43468316:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1137:37737:25536 | . | NO_LDAS | 0.0034 | GT | 1.8295 | AG | 1.5329 | "[""INTRACHROMOSOMAL[chr11:43.54Mb]""]" | chr11:87302359-chr11:43468316 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| TMEM132B--UBC | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TMEM132B^ENSG00000139364.10 | chr12:125415677:+ | UBC^ENSG00000150991.15 | chr12:124913774:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2158:2157:29711 | . | YES_LDAS | 0.0034 | GT | 1.5656 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr12:0.27Mb]""]" | chr12:125415677-chr12:124913774 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| TMEM11--TAPT1-AS1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TMEM11^ENSG00000178307.10 | chr17:21214091:- | TAPT1-AS1^ENSG00000263327.6 | chr4:16238771:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1139:24566:9674 | . | YES_LDAS | 0.0034 | GT | 1.5656 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr17--chr4]""]" | chr17:21214091-chr4:16238771 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| TMED10--JPX | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | TMED10^ENSG00000170348.9 | chr14:75147664:- | JPX^ENSG00000225470.8 | chrX:74031792:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1366:47307:5092 | . | NO_LDAS | 0.0011 | GT | 1.5546 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr14--chrX]""]" | chr14:75147664-chrX:74031792 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| TMBIM4--SCAF11 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TMBIM4^ENSG00000155957.18 | chr12:66169855:- | SCAF11^ENSG00000139218.18 | chr12:45934505:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1173:29970:8076 | . | YES_LDAS | 0.0034 | GT | 1.9899 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr12:20.14Mb]""]" | chr12:66169855-chr12:45934505 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| TM9SF2--KCNA1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TM9SF2^ENSG00000125304.10 | chr13:99554455:+ | KCNA1^ENSG00000111262.6 | chr12:4913326:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1214:26281:28002 | . | NO_LDAS | 0.0034 | GT | 1.7465 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr13--chr12]""]" | chr13:99554455-chr12:4913326 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| TM9SF1--ITPRIP | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TM9SF1^ENSG00000100926.15 | chr14:24194675:- | ITPRIP^ENSG00000148841.17 | chr10:104315904:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2363:50608:2485 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr14--chr10]""]" | chr14:24194675-chr10:104315904 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| TLR6--GOLGA8CP | 1 | 0 | 0.17 | 0.0 | INCL_NON_REF_SPLICE | TLR6^ENSG00000174130.12 | chr4:38827345:- | GOLGA8CP^ENSG00000181984.11 | chr15:20574016:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1122:11824:21570 | . | NO_LDAS | 0.0006 | GT | 1.9656 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr4--chr15]""]" | chr4:38827345-chr15:20574016 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| TLR6--AL161935.3 | 1 | 0 | 0.17 | 0.0 | INCL_NON_REF_SPLICE | TLR6^ENSG00000174130.12 | chr4:38827345:- | AL161935.3^ENSG00000286694.1 | chr10:31608790:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1122:11824:21570 | . | NO_LDAS | 0.0006 | GT | 1.9656 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chr4--chr10]""]" | chr4:38827345-chr10:31608790 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| TKT--TKTL1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TKT^ENSG00000163931.16 | chr3:53229007:- | TKTL1^ENSG00000007350.17 | chrX:154325339:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1259:42461:3648 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr3--chrX]""]" | chr3:53229007-chrX:154325339 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| THSD1--LHFPL6 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | THSD1^ENSG00000136114.17 | chr13:52406197:- | LHFPL6^ENSG00000183722.9 | chr13:39603350:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1224:18879:23195 | . | NO_LDAS | 0.0034 | GT | 1.2366 | AG | 1.3383 | "[""INTRACHROMOSOMAL[chr13:12.77Mb]""]" | chr13:52406197-chr13:39603350 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| THOC5--RGL3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | THOC5^ENSG00000100296.14 | chr22:29506548:- | RGL3^ENSG00000205517.13 | chr19:11397597:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1221:17528:6283 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr22--chr19]""]" | chr22:29506548-chr19:11397597 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| THA1P--CTRB2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | THA1P^ENSG00000267676.1 | chr17:78254345:- | CTRB2^ENSG00000168928.13 | chr16:75206832:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1205:37332:14186 | . | NO_LDAS | 0.0034 | GT | 1.4256 | AG | 0.9056 | "[""INTERCHROMOSOMAL[chr17--chr16]""]" | chr17:78254345-chr16:75206832 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| TGFBR3--RSBN1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TGFBR3^ENSG00000069702.11 | chr1:91758613:- | RSBN1^ENSG00000081019.13 | chr1:113798036:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2406:30067:28983 | . | YES_LDAS | 0.0034 | GT | 1.8295 | AG | 1.5546 | "[""INTRACHROMOSOMAL[chr1:21.86Mb]""]" | chr1:91758613-chr1:113798036 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| TGFB3--HSPA12A | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TGFB3^ENSG00000119699.8 | chr14:75965588:- | HSPA12A^ENSG00000165868.16 | chr10:116676502:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2158:50462:15993 | . | YES_LDAS | 0.0034 | GT | 1.5546 | AG | 1.5058 | "[""INTERCHROMOSOMAL[chr14--chr10]""]" | chr14:75965588-chr10:116676502 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| TFRC--CD33 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TFRC^ENSG00000072274.13 | chr3:196081918:- | CD33^ENSG00000105383.15 | chr19:51238708:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2266:23514:16035 | . | NO_LDAS | 0.0034 | GT | 1.3383 | AG | 1.6895 | "[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr3--chr19]""]" | chr3:196081918-chr19:51238708 | False | 0 | Excluded | annotation | pattern: | HGNC_GENEFAM | FAIL | 1 | |||
| TFG--TANC2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TFG^ENSG00000114354.15 | chr3:100744931:+ | TANC2^ENSG00000170921.15 | chr17:63420114:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1119:25141:16638 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.4566 | "[""INTERCHROMOSOMAL[chr3--chr17]""]" | chr3:100744931-chr17:63420114 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| TFDP1P2--NCBP1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TFDP1P2^ENSG00000223723.1 | chrX:36962640:- | NCBP1^ENSG00000136937.13 | chr9:97660946:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1184:19267:3046 | . | NO_LDAS | 0.0034 | GT | 1.6895 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chrX--chr9]""]" | chrX:36962640-chr9:97660946 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| TET3--DGUOK | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TET3^ENSG00000187605.16 | chr2:74048411:+ | DGUOK^ENSG00000114956.20 | chr2:73946719:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1137:25367:23448 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 1.8295 | "[""DEEPEST2019"",""TumorFusionsNAR2018"",""ChimerSeq"",""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr2:0.03Mb]"",""LOCAL_REARRANGEMENT:+:[25949]""]" | chr2:74048411-chr2:73946719 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| TET2--AL356534.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TET2^ENSG00000168769.14 | chr4:105235465:+ | AL356534.1^ENSG00000286215.1 | chr6:127065598:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1290:36264:23994 | . | NO_LDAS | 0.0034 | GT | 1.5546 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr4--chr6]""]" | chr4:105235465-chr6:127065598 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| TERF2--BAMBI | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TERF2^ENSG00000132604.11 | chr16:69385790:- | BAMBI^ENSG00000095739.11 | chr10:28677865:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1408:15522:16904 | . | NO_LDAS | 0.0034 | GT | 1.6402 | AG | 0.971 | "[""INTERCHROMOSOMAL[chr16--chr10]""]" | chr16:69385790-chr10:28677865 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| TECPR2--USP3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TECPR2^ENSG00000196663.16 | chr14:102465289:+ | USP3^ENSG00000140455.17 | chr15:63574046:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1125:25408:27497 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr14--chr15]""]" | chr14:102465289-chr15:63574046 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| TCHP--RNASET2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TCHP^ENSG00000139437.18 | chr12:109911239:+ | RNASET2^ENSG00000026297.16 | chr6:166931929:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1131:37599:27679 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr12--chr6]""]" | chr12:109911239-chr6:166931929 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| TCF12--SNX29 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TCF12^ENSG00000140262.18 | chr15:57091891:+ | SNX29^ENSG00000048471.14 | chr16:12277933:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1298:38999:3340 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr15--chr16]""]" | chr15:57091891-chr16:12277933 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| TCF12--MYO9A | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TCF12^ENSG00000140262.18 | chr15:57091891:+ | MYO9A^ENSG00000066933.16 | chr15:72046634:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1293:7140:4405 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.7056 | "[""INTRACHROMOSOMAL[chr15:14.52Mb]""]" | chr15:57091891-chr15:72046634 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| TCEANC2--LAMA4 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | TCEANC2^ENSG00000116205.14 | chr1:54103966:+ | LAMA4^ENSG00000112769.20 | chr6:112148259:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2101:32591:15363 | . | NO_LDAS | 0.0011 | GT | 1.7056 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr1--chr6]""]" | chr1:54103966-chr6:112148259 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| TCEA3--ZNF131 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TCEA3^ENSG00000204219.11 | chr1:23424565:- | ZNF131^ENSG00000172262.11 | chr5:43122039:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1245:34695:9898 | . | NO_LDAS | 0.0034 | GT | 1.5656 | AG | 1.5058 | "[""INTERCHROMOSOMAL[chr1--chr5]""]" | chr1:23424565-chr5:43122039 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| TBL3--HIC2 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | TBL3^ENSG00000183751.15 | chr16:1980453:+ | HIC2^ENSG00000169635.10 | chr22:21442805:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1156:14073:9379 | . | NO_LDAS | 0.0017 | GT | 1.7968 | AG | 1.053 | "[""INTERCHROMOSOMAL[chr16--chr22]""]" | chr16:1980453-chr22:21442805 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| TBCCD1--ATF7 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TBCCD1^ENSG00000113838.13 | chr3:186554254:- | ATF7^ENSG00000170653.19 | chr12:53524761:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1127:38020:16077 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr3--chr12]""]" | chr3:186554254-chr12:53524761 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| TBC1D5--ANO10 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TBC1D5^ENSG00000131374.14 | chr3:17403181:- | ANO10^ENSG00000160746.13 | chr3:43565727:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2118:20173:16806 | . | NO_LDAS | 0.0034 | GT | 1.7232 | AG | 1.5656 | "[""INTRACHROMOSOMAL[chr3:25.61Mb]""]" | chr3:17403181-chr3:43565727 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| TBC1D29P--BSG | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TBC1D29P^ENSG00000266733.7 | chr17:30557585:+ | BSG^ENSG00000172270.22 | chr19:579500:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1155:18612:2359 | . | NO_LDAS | 0.0034 | GC | 1.8295 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr17--chr19]""]" | chr17:30557585-chr19:579500 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| TBC1D1--DNAH14 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TBC1D1^ENSG00000065882.16 | chr4:38027879:+ | DNAH14^ENSG00000185842.15 | chr1:225043750:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2265:2262:3130 | . | NO_LDAS | 0.0034 | GT | 1.8256 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr4--chr1]""]" | chr4:38027879-chr1:225043750 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| TARS2--CCDC106 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TARS2^ENSG00000143374.17 | chr1:150504435:+ | CCDC106^ENSG00000173581.8 | chr19:55652992:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2239:3176:29627 | . | NO_LDAS | 0.0034 | GT | 1.9899 | AG | 1.5628 | "[""INTERCHROMOSOMAL[chr1--chr19]""]" | chr1:150504435-chr19:55652992 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| TARM1--CREBZF | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TARM1^ENSG00000248385.8 | chr19:54070096:- | CREBZF^ENSG00000137504.14 | chr11:85664251:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1267:28004:1729 | . | NO_LDAS | 0.0034 | GT | 1.5656 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr19--chr11]""]" | chr19:54070096-chr11:85664251 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| TAOK1--NF1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TAOK1^ENSG00000160551.12 | chr17:29530619:+ | NF1^ENSG00000196712.18 | chr17:31163186:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2127:17059:23882 | . | NO_LDAS | 0.0034 | GT | 1.6402 | AG | 1.3996 | "[""TumorFusionsNAR2018"",""INTRACHROMOSOMAL[chr17:1.54Mb]""]" | chr17:29530619-chr17:31163186 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| TANGO6--EMILIN2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TANGO6^ENSG00000103047.8 | chr16:68878280:+ | EMILIN2^ENSG00000132205.11 | chr18:2914929:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2106:28263:4083 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr16--chr18]""]" | chr16:68878280-chr18:2914929 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| TANC1--ZNF185 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | TANC1^ENSG00000115183.15 | chr2:159001164:+ | ZNF185^ENSG00000147394.18 | chrX:152931724:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1266:2529:29179 | . | NO_LDAS | 0.0011 | GT | 1.4295 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr2--chrX]""]" | chr2:159001164-chrX:152931724 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| TAGLN--EHD4 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TAGLN^ENSG00000149591.17 | chr11:117204272:+ | EHD4^ENSG00000103966.11 | chr15:41898500:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2307:9284:9576 | . | NO_LDAS | 0.0034 | GT | 1.7056 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr11--chr15]""]" | chr11:117204272-chr15:41898500 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| TADA2A--DGKH | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TADA2A^ENSG00000276234.5 | chr17:37444768:+ | DGKH^ENSG00000102780.17 | chr13:42155291:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2351:27115:10416 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.5656 | "[""INTERCHROMOSOMAL[chr17--chr13]""]" | chr17:37444768-chr13:42155291 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| SYTL4--KRT18P64 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SYTL4^ENSG00000102362.15 | chrX:100689852:- | KRT18P64^ENSG00000213211.2 | chr6:85288374:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1308:20262:6002 | . | NO_LDAS | 0.0034 | GT | 1.5656 | AG | 1.5628 | "[""INTERCHROMOSOMAL[chrX--chr6]""]" | chrX:100689852-chr6:85288374 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| SYNCRIP--VPS13B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SYNCRIP^ENSG00000135316.19 | chr6:85636967:- | VPS13B^ENSG00000132549.19 | chr8:99170039:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1262:40148:18053 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr6--chr8]""]" | chr6:85636967-chr8:99170039 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| SYF2--ZCWPW1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SYF2^ENSG00000117614.10 | chr1:25232104:- | ZCWPW1^ENSG00000078487.17 | chr7:100416314:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2452:6825:22775 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr1--chr7]""]" | chr1:25232104-chr7:100416314 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| SURF6--AATK | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SURF6^ENSG00000148296.7 | chr9:133334392:- | AATK^ENSG00000181409.14 | chr17:81110988:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2155:22633:18655 | . | NO_LDAS | 0.0034 | GT | 1.8256 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr9--chr17]""]" | chr9:133334392-chr17:81110988 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| SUN2--SUN1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SUN2^ENSG00000100242.15 | chr22:38738587:- | SUN1^ENSG00000164828.18 | chr7:872470:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2401:29275:15559 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.5058 | "[""INTERCHROMOSOMAL[chr22--chr7]""]" | chr22:38738587-chr7:872470 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| SUN1--NUDCD2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SUN1^ENSG00000164828.18 | chr7:843205:+ | NUDCD2^ENSG00000170584.11 | chr5:163457080:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2237:22252:17689 | . | YES_LDAS | 0.0034 | GT | 0.9056 | AG | 1.5329 | "[""INTERCHROMOSOMAL[chr7--chr5]""]" | chr7:843205-chr5:163457080 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| SUFU--MAPKBP1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SUFU^ENSG00000107882.12 | chr10:102617944:+ | MAPKBP1^ENSG00000137802.14 | chr15:41826958:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1120:34824:7572 | . | NO_LDAS | 0.0034 | GT | 1.6895 | AG | 1.2366 | "[""INTERCHROMOSOMAL[chr10--chr15]""]" | chr10:102617944-chr15:41826958 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| STXBP5L--SLC25A26 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | STXBP5L^ENSG00000145087.13 | chr3:121421397:+ | SLC25A26^ENSG00000144741.18 | chr3:66380284:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2240:34662:25339 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr3:54.52Mb]""]" | chr3:121421397-chr3:66380284 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| STXBP4--TOM1L1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | STXBP4^ENSG00000166263.13 | chr17:55081183:+ | TOM1L1^ENSG00000141198.16 | chr17:54947261:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2314:30035:12308 | . | NO_LDAS | 0.0034 | GT | 1.7465 | AG | 1.9899 | "[""ChimerSeq"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr17:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[6771]""]" | chr17:55081183-chr17:54947261 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| STXBP1--AL355075.4 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | STXBP1^ENSG00000136854.24 | chr9:127654770:+ | AL355075.4^ENSG00000259001.3 | chr14:20343265:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1411:11242:21570 | . | NO_LDAS | 0.0034 | GT | 1.2867 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr9--chr14]""]" | chr9:127654770-chr14:20343265 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| STX3--CTCF | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | STX3^ENSG00000166900.17 | chr11:59792215:+ | CTCF^ENSG00000102974.16 | chr16:67611402:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1198:24526:25998 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr11--chr16]""]" | chr11:59792215-chr16:67611402 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| STX12--MLYCD | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | STX12^ENSG00000117758.14 | chr1:27789631:+ | MLYCD^ENSG00000103150.7 | chr16:83899322:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1202:24679:2864 | . | NO_LDAS | 0.0034 | GT | 1.9219 | AG | 1.3383 | "[""INTERCHROMOSOMAL[chr1--chr16]""]" | chr1:27789631-chr16:83899322 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| STRN4--ZNF274 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | STRN4^ENSG00000090372.15 | chr19:46736823:- | ZNF274^ENSG00000171606.18 | chr19:58185697:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1138:16525:9758 | . | NO_LDAS | 0.0034 | GT | 1.9219 | AG | 1.7465 | "[""INTRACHROMOSOMAL[chr19:11.44Mb]""]" | chr19:46736823-chr19:58185697 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| STRN4--ATOH7 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | STRN4^ENSG00000090372.15 | chr19:46746495:- | ATOH7^ENSG00000179774.9 | chr10:68231657:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1132:21047:24064 | . | NO_LDAS | 0.0034 | GT | 0.3534 | AG | 0.9968 | "[""INTERCHROMOSOMAL[chr19--chr10]""]" | chr19:46746495-chr10:68231657 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| STK24--POTEE | 1 | 0 | 0.25 | 0.0 | INCL_NON_REF_SPLICE | STK24^ENSG00000102572.15 | chr13:98519405:- | POTEE^ENSG00000188219.14 | chr2:131236772:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1144:50487:21108 | . | NO_LDAS | 0.0009 | GT | 1.8892 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr13--chr2]""]" | chr13:98519405-chr2:131236772 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| STEAP3--RPTN | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | STEAP3^ENSG00000115107.20 | chr2:119257490:+ | RPTN^ENSG00000215853.3 | chr1:152156808:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1136:20950:27679 | . | NO_LDAS | 0.0034 | GT | 1.5301 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr2--chr1]""]" | chr2:119257490-chr1:152156808 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| STAU2--SCOC | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | STAU2^ENSG00000040341.18 | chr8:73673107:- | SCOC^ENSG00000153130.18 | chr4:140379121:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1365:28247:13975 | . | NO_LDAS | 0.0034 | GT | 1.9219 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr8--chr4]""]" | chr8:73673107-chr4:140379121 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| STAT6--JMJD8 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | STAT6^ENSG00000166888.12 | chr12:57098505:- | JMJD8^ENSG00000161999.13 | chr16:682288:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1311:11719:11551 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr12--chr16]""]" | chr12:57098505-chr16:682288 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| STAT6--AC232323.1 | 1 | 0 | 0.08 | 0.0 | INCL_NON_REF_SPLICE | STAT6^ENSG00000166888.12 | chr12:57097068:- | AC232323.1^ENSG00000274343.1 | chr8:85791117:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1453:48812:25493 | . | NO_LDAS | 0.0003 | GT | 1.3753 | AG | 1.5656 | "[""INTERCHROMOSOMAL[chr12--chr8]""]" | chr12:57097068-chr8:85791117 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| STARD7-AS1--TSIX | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | STARD7-AS1^ENSG00000204685.7 | chr2:96241038:+ | TSIX^ENSG00000270641.1 | chrX:73827603:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2454:48027:7656 | . | NO_LDAS | 0.0017 | GT | 1.9899 | AG | 1.7465 | "[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr2--chrX]""]" | chr2:96241038-chrX:73827603 | False | 0 | Excluded | annotation | pattern: | HGNC_GENEFAM | FAIL | 1 | |||
| STARD13--DIAPH2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | STARD13^ENSG00000133121.21 | chr13:33350290:- | DIAPH2^ENSG00000147202.18 | chrX:97072941:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1115:22010:17408 | . | YES_LDAS | 0.0034 | GT | 1.6729 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr13--chrX]""]" | chr13:33350290-chrX:97072941 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| STARD10--ZNF335 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | STARD10^ENSG00000214530.10 | chr11:72757821:- | ZNF335^ENSG00000198026.8 | chr20:45968362:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1149:1947:5358 | . | NO_LDAS | 0.0017 | GC | 1.8892 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr11--chr20]""]" | chr11:72757821-chr20:45968362 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| STAMBP--SETX | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | STAMBP^ENSG00000124356.16 | chr2:73845262:+ | SETX^ENSG00000107290.14 | chr9:132329733:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1465:44144:20771 | . | NO_LDAS | 0.0034 | GT | 1.371 | AG | 1.3753 | "[""INTERCHROMOSOMAL[chr2--chr9]""]" | chr2:73845262-chr9:132329733 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| STAM--CNNM4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | STAM^ENSG00000136738.15 | chr10:17700279:+ | CNNM4^ENSG00000158158.12 | chr2:96797012:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1104:28749:5120 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr10--chr2]""]" | chr10:17700279-chr2:96797012 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| STAM--CELF2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | STAM^ENSG00000136738.15 | chr10:17660548:+ | CELF2^ENSG00000048740.18 | chr10:11249153:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1351:32907:4279 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8256 | "[""INTRACHROMOSOMAL[chr10:6.31Mb]""]" | chr10:17660548-chr10:11249153 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| STAG3--HGSNAT | 1 | 0 | 0.25 | 0.0 | ONLY_REF_SPLICE | STAG3^ENSG00000066923.18 | chr7:100198166:+ | HGSNAT^ENSG00000165102.15 | chr8:43146948:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1216:34234:7446 | . | YES_LDAS | 0.0009 | GT | 1.7819 | AG | 1.4256 | "[""INTERCHROMOSOMAL[chr7--chr8]""]" | chr7:100198166-chr8:43146948 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| STAG1--SLC41A3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | STAG1^ENSG00000118007.13 | chr3:136752195:- | SLC41A3^ENSG00000114544.17 | chr3:126068246:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2103:41507:23322 | . | YES_LDAS | 0.0034 | GT | 1.7232 | AG | 1.5628 | "[""INTRACHROMOSOMAL[chr3:10.23Mb]""]" | chr3:136752195-chr3:126068246 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| ST8SIA1--AEBP2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ST8SIA1^ENSG00000111728.11 | chr12:22249006:- | AEBP2^ENSG00000139154.16 | chr12:19720633:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1237:25327:11579 | . | YES_LDAS | 0.0034 | GT | 1.9219 | AG | 1.9899 | "[""DEEPEST2019"",""TumorFusionsNAR2018"",""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr12:2.34Mb]""]" | chr12:22249006-chr12:19720633 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| ST3GAL5--SP1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ST3GAL5^ENSG00000115525.18 | chr2:85888824:- | SP1^ENSG00000185591.10 | chr12:53381659:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1450:33101:5792 | . | NO_LDAS | 0.0034 | GT | 1.6895 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chr2--chr12]""]" | chr2:85888824-chr12:53381659 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| ST18--PTK7 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | ST18^ENSG00000147488.11 | chr8:52161502:- | PTK7^ENSG00000112655.16 | chr6:43132042:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1147:26880:17689 | . | NO_LDAS | 0.0011 | GT | 1.7968 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr8--chr6]""]" | chr8:52161502-chr6:43132042 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| SSX2IP--GDAP2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SSX2IP^ENSG00000117155.17 | chr1:84690371:- | GDAP2^ENSG00000196505.11 | chr1:117870616:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1289:12148:26222 | . | YES_LDAS | 0.0034 | GT | 1.5329 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr1:33.17Mb]""]" | chr1:84690371-chr1:117870616 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| SSX2IP--DOCK7 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SSX2IP^ENSG00000117155.17 | chr1:84690371:- | DOCK7^ENSG00000116641.18 | chr1:62636603:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1260:8904:23714 | . | YES_LDAS | 0.0034 | GT | 1.5329 | AG | 1.5219 | "[""INTRACHROMOSOMAL[chr1:21.96Mb]""]" | chr1:84690371-chr1:62636603 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| SSU72--FOCAD | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SSU72^ENSG00000160075.12 | chr1:1574478:- | FOCAD^ENSG00000188352.12 | chr9:20715322:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1427:40495:27932 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr1--chr9]""]" | chr1:1574478-chr9:20715322 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| SSBP4--UBB | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SSBP4^ENSG00000130511.16 | chr19:18419149:+ | UBB^ENSG00000170315.14 | chr17:16381902:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1222:27341:9968 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr19--chr17]""]" | chr19:18419149-chr17:16381902 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| SSBP1--ELF4 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | SSBP1^ENSG00000106028.11 | chr7:141746442:+ | ELF4^ENSG00000102034.17 | chrX:130074752:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1258:42947:26909 | . | NO_LDAS | 0.0017 | GT | 1.7232 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr7--chrX]""]" | chr7:141746442-chrX:130074752 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| SRSF5--SLC11A1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SRSF5^ENSG00000100650.16 | chr14:69768282:+ | SLC11A1^ENSG00000018280.17 | chr2:218394345:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1308:26702:9618 | . | NO_LDAS | 0.0034 | GT | 1.2729 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr14--chr2]""]" | chr14:69768282-chr2:218394345 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| SRGAP2--SCAF8 | 1 | 0 | 0.25 | 0.0 | ONLY_REF_SPLICE | SRGAP2^ENSG00000266028.7 | chr1:206206037:+ | SCAF8^ENSG00000213079.10 | chr6:154773989:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1326:39848:7474 | . | YES_LDAS | 0.0009 | GT | 1.9219 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr1--chr6]""]" | chr1:206206037-chr6:154773989 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| SRGAP2--AP000997.4 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SRGAP2^ENSG00000266028.7 | chr1:206458947:+ | AP000997.4^ENSG00000279771.1 | chr11:115659838:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1344:8273:2247 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr1--chr11]""]" | chr1:206458947-chr11:115659838 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| SRGAP1--STX16 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SRGAP1^ENSG00000196935.9 | chr12:64091347:+ | STX16^ENSG00000124222.22 | chr20:58668017:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1331:41037:25367 | . | NO_LDAS | 0.0034 | GT | 1.7056 | AG | 1.4566 | "[""INTERCHROMOSOMAL[chr12--chr20]""]" | chr12:64091347-chr20:58668017 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| SRC--PRKAG1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SRC^ENSG00000197122.12 | chr20:37393997:+ | PRKAG1^ENSG00000181929.13 | chr12:49012919:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1272:27705:20267 | . | NO_LDAS | 0.0034 | GT | 1.7968 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr20--chr12]""]" | chr20:37393997-chr12:49012919 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| SRBD1--CHMP3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SRBD1^ENSG00000068784.13 | chr2:45476993:- | CHMP3^ENSG00000115561.16 | chr2:86542312:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2422:10198:7908 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr2:40.89Mb]""]" | chr2:45476993-chr2:86542312 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| SPSB4--PXYLP1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SPSB4^ENSG00000175093.5 | chr3:141066798:+ | PXYLP1^ENSG00000155893.13 | chr3:141260123:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1247:24590:28997 | . | YES_LDAS | 0.0034 | GT | 1.9219 | AG | 1.9656 | "[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr3:0.08Mb]"",""NEIGHBORS[80115]""]" | chr3:141066798-chr3:141260123 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 |
| SPOP--ATF7 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SPOP^ENSG00000121067.19 | chr17:49675895:- | ATF7^ENSG00000170653.19 | chr12:53552637:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1178:9681:21584 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr17--chr12]""]" | chr17:49675895-chr12:53552637 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 |
| SPICE1--CPEB4 | 1 | 0 | 0.25 | 0.0 | INCL_NON_REF_SPLICE | SPICE1^ENSG00000163611.11 | chr3:113515098:- | CPEB4^ENSG00000113742.14 | chr5:173888409:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2311:31410:13737 | . | NO_LDAS | 0.0009 | GT | 1.4716 | AG | 1.1589 | "[""INTERCHROMOSOMAL[chr3--chr5]""]" | chr3:113515098-chr5:173888409 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| SPDYE2--GJB3 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | SPDYE2^ENSG00000205238.9 | chr7:102553439:+ | GJB3^ENSG00000188910.8 | chr1:34785935:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1111:27098:1701 | . | YES_LDAS | 0.0011 | GT | 1.6895 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr7--chr1]""]" | chr7:102553439-chr1:34785935 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| SPDL1--SPRED1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SPDL1^ENSG00000040275.17 | chr5:169583889:+ | SPRED1^ENSG00000166068.13 | chr15:38339737:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2201:23377:17591 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr5--chr15]""]" | chr5:169583889-chr15:38339737 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| SPATA20--ZNF185 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SPATA20^ENSG00000006282.21 | chr17:50547369:+ | ZNF185^ENSG00000147394.18 | chrX:152917131:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2182:19105:25998 | . | NO_LDAS | 0.0034 | GT | 1.7465 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr17--chrX]""]" | chr17:50547369-chrX:152917131 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| SOX9--DONSON | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SOX9^ENSG00000125398.8 | chr17:72125918:+ | DONSON^ENSG00000159147.18 | chr21:33577704:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2155:32640:5806 | . | NO_LDAS | 0.0034 | GT | 0.9968 | AG | 0.971 | "[""INTERCHROMOSOMAL[chr17--chr21]""]" | chr17:72125918-chr21:33577704 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| SOX6--RANBP1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SOX6^ENSG00000110693.18 | chr11:15968998:- | RANBP1^ENSG00000099901.17 | chr22:20126955:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2428:44581:26544 | . | NO_LDAS | 0.0034 | GT | 0.8366 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr11--chr22]""]" | chr11:15968998-chr22:20126955 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| SOSTDC1--ZNF385D | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SOSTDC1^ENSG00000171243.8 | chr7:16530187:- | ZNF385D^ENSG00000151789.12 | chr3:21665028:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1244:28126:2303 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr7--chr3]""]" | chr7:16530187-chr3:21665028 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| SORBS3--SPAG5 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SORBS3^ENSG00000120896.13 | chr8:22561373:+ | SPAG5^ENSG00000076382.17 | chr17:28579483:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1149:14672:6241 | . | NO_LDAS | 0.0034 | GT | 1.585 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr8--chr17]""]" | chr8:22561373-chr17:28579483 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| SORBS1--BNIP5 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SORBS1^ENSG00000095637.22 | chr10:95339133:- | BNIP5^ENSG00000189325.7 | chr6:36323533:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2171:7181:26026 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr10--chr6]""]" | chr10:95339133-chr6:36323533 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| SOD2--NFXL1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SOD2^ENSG00000112096.19 | chr6:159682474:- | NFXL1^ENSG00000170448.12 | chr4:47890703:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1267:15894:26797 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr6--chr4]""]" | chr6:159682474-chr4:47890703 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| SNX3--PDSS2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SNX3^ENSG00000112335.15 | chr6:108260760:- | PDSS2^ENSG00000164494.12 | chr6:107212282:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2274:35350:20253 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.7968 | "[""INTRACHROMOSOMAL[chr6:0.75Mb]""]" | chr6:108260760-chr6:107212282 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| SNX29--ARHGAP24 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SNX29^ENSG00000048471.14 | chr16:12356279:+ | ARHGAP24^ENSG00000138639.18 | chr4:85570522:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2488:45406:19286 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr16--chr4]""]" | chr16:12356279-chr4:85570522 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| SNX24--MAST4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SNX24^ENSG00000064652.11 | chr5:122845693:+ | MAST4^ENSG00000069020.18 | chr5:67054404:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1162:30982:6016 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr5:55.67Mb]""]" | chr5:122845693-chr5:67054404 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| SNX1--EGFEM1P | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SNX1^ENSG00000028528.15 | chr15:64118244:+ | EGFEM1P^ENSG00000206120.11 | chr3:168810225:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2190:19389:12308 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.5329 | "[""INTERCHROMOSOMAL[chr15--chr3]""]" | chr15:64118244-chr3:168810225 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| SNORD65C--CHD2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SNORD65C^ENSG00000212264.1 | chr7:23396529:+ | CHD2^ENSG00000173575.22 | chr15:92997257:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1165:50058:12770 | . | NO_LDAS | 0.0034 | AT | 1.0389 | AC | 1.8892 | "[""INTERCHROMOSOMAL[chr7--chr15]""]" | chr7:23396529-chr15:92997257 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| SNORA14A--SNORA14B | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SNORA14A^ENSG00000201643.1 | chr7:75943860:+ | SNORA14B^ENSG00000207181.1 | chr1:235127857:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1126:45018:12588 | . | NO_LDAS | 0.0034 | GT | 1.6402 | AG | 1.9086 | "[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr7--chr1]""]" | chr7:75943860-chr1:235127857 | False | 0 | Excluded | annotation | pattern: | HGNC_GENEFAM | FAIL | 1 | |||
| SNHG14--DPYSL2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SNHG14^ENSG00000224078.15 | chr15:25091111:+ | DPYSL2^ENSG00000092964.18 | chr8:26655615:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1366:28757:12336 | . | NO_LDAS | 0.0034 | GT | 1.8323 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr15--chr8]""]" | chr15:25091111-chr8:26655615 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| SNED1--TET2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SNED1^ENSG00000162804.14 | chr2:241049933:+ | TET2^ENSG00000168769.14 | chr4:105243625:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1108:31629:28576 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr2--chr4]""]" | chr2:241049933-chr4:105243625 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| SNAI2--CD3D | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SNAI2^ENSG00000019549.13 | chr8:48920279:- | CD3D^ENSG00000167286.10 | chr11:118342711:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2434:14632:19959 | . | NO_LDAS | 0.0034 | AT | 1.8323 | AC | 1.4295 | "[""INTERCHROMOSOMAL[chr8--chr11]""]" | chr8:48920279-chr11:118342711 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| SMYD4--STAU1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | SMYD4^ENSG00000186532.12 | chr17:1829860:- | STAU1^ENSG00000124214.21 | chr20:49124455:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1141:50462:17983 | . | NO_LDAS | 0.0017 | GT | 1.3996 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr17--chr20]""]" | chr17:1829860-chr20:49124455 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| SMIM13--AL022098.1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SMIM13^ENSG00000224531.6 | chr6:11094389:+ | AL022098.1^ENSG00000287920.1 | chr6:11295769:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1208:39581:14746 | . | YES_LDAS | 0.0034 | GT | 1.6895 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr6:0.15Mb]""]" | chr6:11094389-chr6:11295769 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 |
| SMCHD1--DONSON | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SMCHD1^ENSG00000101596.16 | chr18:2656256:+ | DONSON^ENSG00000159147.18 | chr21:33577704:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2118:48076:13709 | . | NO_LDAS | 0.0034 | GT | 1.5219 | AG | 0.971 | "[""INTERCHROMOSOMAL[chr18--chr21]""]" | chr18:2656256-chr21:33577704 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| SMC4--SMIM8 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SMC4^ENSG00000113810.16 | chr3:160412084:+ | SMIM8^ENSG00000111850.11 | chr6:87375942:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1298:31572:25395 | . | NO_LDAS | 0.0034 | GT | 1.4295 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr3--chr6]""]" | chr3:160412084-chr6:87375942 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| SLK--ZMPSTE24 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SLK^ENSG00000065613.15 | chr10:104002906:+ | ZMPSTE24^ENSG00000084073.10 | chr1:40293524:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2483:50737:24597 | . | NO_LDAS | 0.0034 | GT | 1.3996 | AG | 1.5546 | "[""INTERCHROMOSOMAL[chr10--chr1]""]" | chr10:104002906-chr1:40293524 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| SLC4A3--NEU2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SLC4A3^ENSG00000114923.17 | chr2:219629695:+ | NEU2^ENSG00000115488.3 | chr2:233034748:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2109:41288:18515 | . | NO_LDAS | 0.0034 | GT | 1.7465 | AG | 1.4256 | "[""INTRACHROMOSOMAL[chr2:13.39Mb]""]" | chr2:219629695-chr2:233034748 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| SLC44A3-AS1--CARF | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SLC44A3-AS1^ENSG00000224081.9 | chr1:94638437:- | CARF^ENSG00000138380.18 | chr2:202952559:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1218:7181:11509 | . | NO_LDAS | 0.0034 | GC | 1.9329 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr1--chr2]""]" | chr1:94638437-chr2:202952559 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| SLC35G1--EXOC6 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SLC35G1^ENSG00000176273.15 | chr10:93894211:+ | EXOC6^ENSG00000138190.17 | chr10:93056924:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2139:4818:21570 | . | YES_LDAS | 0.0034 | GT | 1.3996 | AG | 1.6895 | "[""INTRACHROMOSOMAL[chr10:0.83Mb]""]" | chr10:93894211-chr10:93056924 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| SLC35F5--ACTR3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SLC35F5^ENSG00000115084.15 | chr2:113756370:- | ACTR3^ENSG00000115091.12 | chr2:113927345:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1127:46951:19776 | . | YES_LDAS | 0.0034 | GT | 1.4566 | AG | 1.9219 | "[""INTRACHROMOSOMAL[chr2:0.13Mb]""]" | chr2:113756370-chr2:113927345 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| SLC35F1--RBPJ | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SLC35F1^ENSG00000196376.11 | chr6:117907567:+ | RBPJ^ENSG00000168214.21 | chr4:26321255:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2161:9681:21640 | . | NO_LDAS | 0.0034 | GT | 1.231 | AG | 0.8366 | "[""INTERCHROMOSOMAL[chr6--chr4]""]" | chr6:117907567-chr4:26321255 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| SLC35B2--IQCE | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | SLC35B2^ENSG00000157593.19 | chr6:44257299:- | IQCE^ENSG00000106012.18 | chr7:2611284:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1147:16622:18473 | . | NO_LDAS | 0.0017 | GT | 1.3996 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr6--chr7]""]" | chr6:44257299-chr7:2611284 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| SLC2A4RG--DTX2P1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SLC2A4RG^ENSG00000125520.14 | chr20:63741409:+ | DTX2P1^ENSG00000186704.9 | chr7:76980987:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2123:6259:2766 | . | YES_LDAS | 0.0034 | GC | 1.9219 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr20--chr7]""]" | chr20:63741409-chr7:76980987 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| SLC2A1--LINC01491 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SLC2A1^ENSG00000117394.24 | chr1:42929876:- | LINC01491^ENSG00000259572.7 | chr15:47804856:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2384:40423:10122 | . | NO_LDAS | 0.0034 | GT | 1.5656 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr1--chr15]""]" | chr1:42929876-chr15:47804856 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| SLC27A3--DENND6B | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SLC27A3^ENSG00000143554.14 | chr1:153775937:+ | DENND6B^ENSG00000205593.12 | chr22:50311882:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1367:51304:10500 | . | NO_LDAS | 0.0034 | GT | 1.4566 | AG | 1.3753 | "[""INTERCHROMOSOMAL[chr1--chr22]""]" | chr1:153775937-chr22:50311882 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| SLC25A36--PLSCR1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SLC25A36^ENSG00000114120.14 | chr3:140974005:+ | PLSCR1^ENSG00000188313.13 | chr3:146517167:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1343:46725:1560 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.6895 | "[""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr3:5.53Mb]""]" | chr3:140974005-chr3:146517167 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| SLC25A26--ATXN7 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SLC25A26^ENSG00000144741.18 | chr3:66236700:+ | ATXN7^ENSG00000163635.20 | chr3:63988059:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1336:52007:9057 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.5656 | "[""INTRACHROMOSOMAL[chr3:2.13Mb]""]" | chr3:66236700-chr3:63988059 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| SLC25A25--PLEKHA6 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SLC25A25^ENSG00000148339.12 | chr9:128103839:+ | PLEKHA6^ENSG00000143850.16 | chr1:204257700:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1143:41685:28366 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.6729 | "[""INTERCHROMOSOMAL[chr9--chr1]""]" | chr9:128103839-chr1:204257700 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| SLC22A23--ZC3H3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SLC22A23^ENSG00000137266.15 | chr6:3455906:- | ZC3H3^ENSG00000014164.7 | chr8:143441120:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1282:13556:3326 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.6729 | "[""INTERCHROMOSOMAL[chr6--chr8]""]" | chr6:3455906-chr8:143441120 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| SLC20A2--GNA13 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SLC20A2^ENSG00000168575.10 | chr8:42541131:- | GNA13^ENSG00000120063.10 | chr17:65056613:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1324:46053:16203 | . | NO_LDAS | 0.0034 | GT | 1.4256 | AG | 0.9183 | "[""INTERCHROMOSOMAL[chr8--chr17]""]" | chr8:42541131-chr17:65056613 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| SLC16A9--INPP4B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SLC16A9^ENSG00000165449.12 | chr10:59709479:- | INPP4B^ENSG00000109452.12 | chr4:142173809:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2488:5191:1589 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr10--chr4]""]" | chr10:59709479-chr4:142173809 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| SLC16A7--CCDC91 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SLC16A7^ENSG00000118596.12 | chr12:59705018:+ | CCDC91^ENSG00000123106.10 | chr12:28305649:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1176:3476:19552 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr12:31.01Mb]""]" | chr12:59705018-chr12:28305649 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| SLC16A2--FAM177A1 | 1 | 0 | 0.2 | 0.0 | INCL_NON_REF_SPLICE | SLC16A2^ENSG00000147100.11 | chrX:74532575:+ | FAM177A1^ENSG00000151327.13 | chr14:35081022:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1250:22924:14228 | . | NO_LDAS | 0.0007 | GT | 1.2419 | AG | 0.9183 | "[""INTERCHROMOSOMAL[chrX--chr14]""]" | chrX:74532575-chr14:35081022 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| SLC15A4--COL4A2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SLC15A4^ENSG00000139370.12 | chr12:128823398:- | COL4A2^ENSG00000134871.19 | chr13:110424734:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2361:24105:22411 | . | NO_LDAS | 0.0034 | GT | 1.8323 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr12--chr13]""]" | chr12:128823398-chr13:110424734 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| SLC12A7--GSTO1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | SLC12A7^ENSG00000113504.21 | chr5:1060344:- | GSTO1^ENSG00000148834.13 | chr10:104259670:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2315:45681:22761 | . | NO_LDAS | 0.0017 | GT | 1.3996 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr5--chr10]""]" | chr5:1060344-chr10:104259670 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| SLC11A2--UPF3A | 1 | 0 | 0.33 | 0.0 | ONLY_REF_SPLICE | SLC11A2^ENSG00000110911.17 | chr12:51026315:- | UPF3A^ENSG00000169062.15 | chr13:114298840:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1335:6865:16287 | . | NO_LDAS | 0.0011 | GT | 1.6402 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr12--chr13]""]" | chr12:51026315-chr13:114298840 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| SLC10A7--RAPGEF2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SLC10A7^ENSG00000120519.15 | chr4:146503849:- | RAPGEF2^ENSG00000109756.9 | chr4:159304342:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1351:43384:29375 | . | NO_LDAS | 0.0034 | GT | 1.5301 | AG | 1.8323 | "[""INTRACHROMOSOMAL[chr4:12.58Mb]""]" | chr4:146503849-chr4:159304342 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| SLAMF6--APPL2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SLAMF6^ENSG00000162739.14 | chr1:160523144:- | APPL2^ENSG00000136044.12 | chr12:105229223:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2383:22382:22032 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr1--chr12]""]" | chr1:160523144-chr12:105229223 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| SIRT3--WDFY2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SIRT3^ENSG00000142082.15 | chr11:223809:- | WDFY2^ENSG00000139668.9 | chr13:51584742:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2484:28546:29403 | . | NO_LDAS | 0.0034 | GT | 1.1589 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr11--chr13]""]" | chr11:223809-chr13:51584742 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| SIRT2--PIK3C2B | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SIRT2^ENSG00000068903.20 | chr19:38880821:- | PIK3C2B^ENSG00000133056.13 | chr1:204494615:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1245:44977:22551 | . | NO_LDAS | 0.0034 | GT | 1.7465 | AG | 1.3753 | "[""INTERCHROMOSOMAL[chr19--chr1]""]" | chr19:38880821-chr1:204494615 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| SIN3B--UBN1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SIN3B^ENSG00000127511.10 | chr19:16871398:+ | UBN1^ENSG00000118900.15 | chr16:4868833:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2161:14866:26418 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr19--chr16]""]" | chr19:16871398-chr16:4868833 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| SHPK--BAZ2B | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SHPK^ENSG00000197417.9 | chr17:3610106:- | BAZ2B^ENSG00000123636.18 | chr2:159429260:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1470:49831:15096 | . | NO_LDAS | 0.0034 | GT | 1.8062 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr17--chr2]""]" | chr17:3610106-chr2:159429260 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| SH3RF2--AP3B1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SH3RF2^ENSG00000156463.18 | chr5:145938306:+ | AP3B1^ENSG00000132842.14 | chr5:78181662:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1204:18385:17128 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.5656 | "[""INTRACHROMOSOMAL[chr5:67.64Mb]""]" | chr5:145938306-chr5:78181662 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| SH3KBP1--CDKL3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SH3KBP1^ENSG00000147010.18 | chrX:19836151:- | CDKL3^ENSG00000006837.12 | chr5:134308466:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2278:25586:21724 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.1589 | "[""INTERCHROMOSOMAL[chrX--chr5]""]" | chrX:19836151-chr5:134308466 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| SH3BP5L--IGBP1P1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SH3BP5L^ENSG00000175137.11 | chr1:248824753:- | IGBP1P1^ENSG00000226677.3 | chr14:34939811:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1493:22981:25928 | . | NO_LDAS | 0.0034 | GT | 1.9219 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr1--chr14]""]" | chr1:248824753-chr14:34939811 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| SH2B2--HOXB13 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SH2B2^ENSG00000160999.10 | chr7:102321603:+ | HOXB13^ENSG00000159184.8 | chr17:48726328:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1301:3387:8889 | . | NO_LDAS | 0.0034 | GT | 0.9968 | AG | 1.5329 | "[""INTERCHROMOSOMAL[chr7--chr17]""]" | chr7:102321603-chr17:48726328 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| SETX--MAGI2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SETX^ENSG00000107290.14 | chr9:132330435:- | MAGI2^ENSG00000187391.22 | chr7:79410875:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2218:50608:9267 | . | NO_LDAS | 0.0034 | AT | 1.6402 | AC | 1.7232 | "[""INTERCHROMOSOMAL[chr9--chr7]""]" | chr9:132330435-chr7:79410875 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| SENP2--TRA2B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SENP2^ENSG00000163904.13 | chr3:185590169:+ | TRA2B^ENSG00000136527.18 | chr3:185923984:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1154:40382:28576 | . | YES_LDAS | 0.0034 | GT | 1.7232 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr3:0.28Mb]""]" | chr3:185590169-chr3:185923984 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| SENP2--KRT23 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SENP2^ENSG00000163904.13 | chr3:185630402:+ | KRT23^ENSG00000108244.17 | chr17:40936298:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2256:10829:12981 | . | NO_LDAS | 0.0034 | GT | 1.8323 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr3--chr17]""]" | chr3:185630402-chr17:40936298 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| SEMA5A--NID2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SEMA5A^ENSG00000112902.12 | chr5:9379861:- | NID2^ENSG00000087303.18 | chr14:52015273:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1205:29930:20393 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.371 | "[""INTERCHROMOSOMAL[chr5--chr14]""]" | chr5:9379861-chr14:52015273 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| SEMA4A--AC100803.3 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | SEMA4A^ENSG00000196189.13 | chr1:156158490:+ | AC100803.3^ENSG00000261655.1 | chr8:141354982:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1428:35455:17885 | . | NO_LDAS | 0.0017 | GT | 1.9219 | AG | 1.5058 | "[""INTERCHROMOSOMAL[chr1--chr8]""]" | chr1:156158490-chr8:141354982 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| SEC61A1--PTOV1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SEC61A1^ENSG00000058262.10 | chr3:128052501:+ | PTOV1^ENSG00000104960.15 | chr19:49855521:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1150:35083:8665 | . | NO_LDAS | 0.0034 | GC | 1.7968 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr3--chr19]""]" | chr3:128052501-chr19:49855521 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| SEC24B--CCDC91 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SEC24B^ENSG00000138802.11 | chr4:109473186:+ | CCDC91^ENSG00000123106.10 | chr12:28305649:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1168:41078:22775 | . | YES_LDAS | 0.0034 | GT | 1.5546 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr4--chr12]""]" | chr4:109473186-chr12:28305649 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| SEC14L6--AC005064.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SEC14L6^ENSG00000214491.8 | chr22:30546629:- | AC005064.1^ENSG00000234715.2 | chr7:103445594:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1163:30286:7922 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr22--chr7]""]" | chr22:30546629-chr7:103445594 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| SDCCAG8--ODF2L | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SDCCAG8^ENSG00000054282.16 | chr1:243426558:+ | ODF2L^ENSG00000122417.15 | chr1:86387086:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1127:24768:4615 | . | YES_LDAS | 0.0034 | GT | 1.6895 | AG | 1.8295 | "[""INTRACHROMOSOMAL[chr1:156.86Mb]""]" | chr1:243426558-chr1:86387086 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| SCEL--FAM184A | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SCEL^ENSG00000136155.17 | chr13:77612941:+ | FAM184A^ENSG00000111879.20 | chr6:119006576:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2204:41879:24947 | . | NO_LDAS | 0.0034 | GT | 1.7232 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr13--chr6]""]" | chr13:77612941-chr6:119006576 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| SCAPER--TAF2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SCAPER^ENSG00000140386.13 | chr15:76574158:- | TAF2^ENSG00000064313.12 | chr8:119785266:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1188:2044:25003 | . | YES_LDAS | 0.0034 | GT | 1.6402 | AG | 0.9056 | "[""INTERCHROMOSOMAL[chr15--chr8]""]" | chr15:76574158-chr8:119785266 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| SCAF11--ZBTB18 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SCAF11^ENSG00000139218.18 | chr12:45990353:- | ZBTB18^ENSG00000179456.10 | chr1:244053788:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1145:10886:24709 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr12--chr1]""]" | chr12:45990353-chr1:244053788 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| SBDSP1--AL590822.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SBDSP1^ENSG00000225648.5 | chr7:72829570:+ | AL590822.1^ENSG00000234396.3 | chr1:2212512:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1204:1502:24513 | . | NO_LDAS | 0.0034 | GT | 1.4295 | AG | 0.5665 | "[""INTERCHROMOSOMAL[chr7--chr1]""]" | chr7:72829570-chr1:2212512 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| SARNP--NAAA | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SARNP^ENSG00000205323.9 | chr12:55793157:- | NAAA^ENSG00000138744.16 | chr4:75931304:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2137:17253:3985 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr12--chr4]""]" | chr12:55793157-chr4:75931304 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| SAR1A--TYSND1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SAR1A^ENSG00000079332.15 | chr10:70152263:- | TYSND1^ENSG00000156521.14 | chr10:70140141:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1148:40779:18641 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8323 | "[""INTRACHROMOSOMAL[chr10:0.00Mb]"",""NEIGHBORS[589]""]" | chr10:70152263-chr10:70140141 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | ||||
| SAMM50--LINC01391 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SAMM50^ENSG00000100347.15 | chr22:43987464:+ | LINC01391^ENSG00000244578.1 | chr3:138940629:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2259:9470:10318 | . | NO_LDAS | 0.0034 | GT | 1.8323 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr22--chr3]""]" | chr22:43987464-chr3:138940629 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| SAMHD1--ARMC5 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | SAMHD1^ENSG00000101347.10 | chr20:36916959:- | ARMC5^ENSG00000140691.18 | chr16:31465259:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1164:23353:14130 | . | NO_LDAS | 0.0017 | AT | 1.8256 | AC | 1.8323 | "[""INTERCHROMOSOMAL[chr20--chr16]""]" | chr20:36916959-chr16:31465259 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| SAMD5--AL033504.1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SAMD5^ENSG00000203727.4 | chr6:147509387:+ | AL033504.1^ENSG00000227681.5 | chr6:147947472:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1428:4285:20477 | . | YES_LDAS | 0.0034 | GT | 1.8295 | AG | 1.5058 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr6:0.09Mb]"",""NEIGHBORS[90682]""]" | chr6:147509387-chr6:147947472 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 |
| SAFB--FGL2 | 1 | 0 | 0.25 | 0.0 | INCL_NON_REF_SPLICE | SAFB^ENSG00000160633.13 | chr19:5623394:+ | FGL2^ENSG00000127951.8 | chr7:77199709:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2306:13556:16385 | . | NO_LDAS | 0.0009 | GT | 1.6895 | AG | 1.371 | "[""INTERCHROMOSOMAL[chr19--chr7]""]" | chr19:5623394-chr7:77199709 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| SAE1--SARS2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SAE1^ENSG00000142230.13 | chr19:47169923:+ | SARS2^ENSG00000104835.15 | chr19:38916314:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1488:24065:23041 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr19:8.18Mb]""]" | chr19:47169923-chr19:38916314 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| SAE1--ENC1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SAE1^ENSG00000142230.13 | chr19:47150375:+ | ENC1^ENSG00000171617.15 | chr5:74636498:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1247:9486:9225 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr19--chr5]""]" | chr19:47150375-chr5:74636498 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| RUFY3--NEBL | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RUFY3^ENSG00000018189.13 | chr4:70784879:+ | NEBL^ENSG00000078114.19 | chr10:20814043:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1427:18377:27595 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr4--chr10]""]" | chr4:70784879-chr10:20814043 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| RTN3--NKX3-1 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | RTN3^ENSG00000133318.14 | chr11:63681683:+ | NKX3-1^ENSG00000167034.10 | chr8:23680497:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2161:19291:13373 | . | NO_LDAS | 0.0011 | GT | 1.5628 | AG | 1.1589 | "[""INTERCHROMOSOMAL[chr11--chr8]""]" | chr11:63681683-chr8:23680497 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| RTCA-AS1--SMIM13 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RTCA-AS1^ENSG00000224616.3 | chr1:100252394:- | SMIM13^ENSG00000224531.6 | chr6:11134542:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1173:5927:24835 | . | YES_LDAS | 0.0034 | GC | 1.9899 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr1--chr6]""]" | chr1:100252394-chr6:11134542 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| RSPH1--EN2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RSPH1^ENSG00000160188.10 | chr21:42485669:- | EN2^ENSG00000164778.4 | chr7:155463163:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1106:39209:1967 | . | NO_LDAS | 0.0034 | GT | 1.6895 | AG | 1.5656 | "[""INTERCHROMOSOMAL[chr21--chr7]""]" | chr21:42485669-chr7:155463163 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| RRAS--PPFIBP2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RRAS^ENSG00000126458.4 | chr19:49636824:- | PPFIBP2^ENSG00000166387.13 | chr11:7642353:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1335:12658:20939 | . | NO_LDAS | 0.0034 | GT | 1.8256 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr19--chr11]""]" | chr19:49636824-chr11:7642353 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| RPS8--SNAPC4 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RPS8^ENSG00000142937.12 | chr1:44776144:+ | SNAPC4^ENSG00000165684.4 | chr9:136378745:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1296:9511:18571 | . | NO_LDAS | 0.0034 | GT | 1.8256 | AG | 1.5546 | "[""INTERCHROMOSOMAL[chr1--chr9]""]" | chr1:44776144-chr9:136378745 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| RPS6P14--RPS6 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RPS6P14^ENSG00000225482.1 | chr10:48293330:+ | RPS6^ENSG00000137154.13 | chr9:19376385:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1169:25052:10234 | . | YES_LDAS | 0.0034 | GT | 1.2729 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr10--chr9]""]" | chr10:48293330-chr9:19376385 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 1 | |||
| RPS5--MED13 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RPS5^ENSG00000083845.9 | chr19:58394595:+ | MED13^ENSG00000108510.10 | chr17:61982955:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1171:25375:20939 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr19--chr17]""]" | chr19:58394595-chr17:61982955 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| RPS3AP11--SEPTIN7 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | RPS3AP11^ENSG00000230116.1 | chr1:42491744:+ | SEPTIN7^ENSG00000122545.20 | chr7:35832804:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1112:30795:8749 | . | NO_LDAS | 0.0011 | GT | 1.9329 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr1--chr7]""]" | chr1:42491744-chr7:35832804 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 |
| RPS29--RPS29P26 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RPS29^ENSG00000213741.11 | chr14:49585950:- | RPS29P26^ENSG00000239320.1 | chr19:39597994:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2390:23134:13779 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr14--chr19]""]" | chr14:49585950-chr19:39597994 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| RPS24P1--AC007182.2 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | RPS24P1^ENSG00000236477.1 | chrY:12245255:+ | AC007182.2^ENSG00000242951.1 | chr14:75596002:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2324:27236:12784 | . | NO_LDAS | 0.0017 | GT | 1.6895 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chrY--chr14]""]" | chrY:12245255-chr14:75596002 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| RPS19--CD79A | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RPS19^ENSG00000105372.8 | chr19:41861212:+ | CD79A^ENSG00000105369.10 | chr19:41878990:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1174:17164:19132 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.6895 | "[""INTRACHROMOSOMAL[chr19:0.00Mb]"",""NEIGHBORS[4354]""]" | chr19:41861212-chr19:41878990 | True | pair|recurrent | breakpoints; | read_through|ribosomal | genes|RPS19 | 0 | Blacklisted | FAIL | 1 | ||
| RPS16--RFLNA | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RPS16^ENSG00000105193.9 | chr19:39435669:- | RFLNA^ENSG00000178882.15 | chr12:124311890:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1314:17957:27119 | . | NO_LDAS | 0.0034 | GT | 1.8256 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr19--chr12]""]" | chr19:39435669-chr12:124311890 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| RPS15A--RPS15AP15 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RPS15A^ENSG00000134419.15 | chr16:18788063:- | RPS15AP15^ENSG00000223739.1 | chr2:65511947:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1296:43505:1168 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr16--chr2]""]" | chr16:18788063-chr2:65511947 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | ||||
| RPS15A--PPIA | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RPS15A^ENSG00000134419.15 | chr16:18788981:- | PPIA^ENSG00000196262.15 | chr7:44801287:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2305:7148:2233 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr16--chr7]""]" | chr16:18788981-chr7:44801287 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| RPS14--ELAVL4 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RPS14^ENSG00000164587.13 | chr5:150444236:- | ELAVL4^ENSG00000162374.18 | chr1:50201383:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2323:47534:11986 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 0.3534 | "[""INTERCHROMOSOMAL[chr5--chr1]""]" | chr5:150444236-chr1:50201383 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| RPS12--HBE1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RPS12^ENSG00000112306.8 | chr6:132817055:+ | HBE1^ENSG00000213931.7 | chr11:5269588:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2193:18984:14438 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr6--chr11]""]" | chr6:132817055-chr11:5269588 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| RPRD1A--KIAA1328 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RPRD1A^ENSG00000141425.18 | chr18:36067254:- | KIAA1328^ENSG00000150477.15 | chr18:36885557:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1229:21678:14424 | . | YES_LDAS | 0.0034 | GT | 1.6402 | AG | 1.3996 | "[""INTRACHROMOSOMAL[chr18:0.76Mb]""]" | chr18:36067254-chr18:36885557 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| RPL9P18--EPHX2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RPL9P18^ENSG00000213309.3 | chr6:63616280:- | EPHX2^ENSG00000120915.14 | chr8:27544517:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2237:33133:26530 | . | NO_LDAS | 0.0034 | GT | 1.5656 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr6--chr8]""]" | chr6:63616280-chr8:27544517 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| RPL7A--RPL7AP52 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | RPL7A^ENSG00000148303.17 | chr9:133350018:+ | RPL7AP52^ENSG00000225354.1 | chr10:94883083:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1391:5344:11663 | . | NO_LDAS | 0.0017 | GT | 1.7465 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr9--chr10]""]" | chr9:133350018-chr10:94883083 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| RPL7A--H2BC20P | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RPL7A^ENSG00000148303.17 | chr9:133350052:+ | H2BC20P^ENSG00000261716.2 | chr1:149849751:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1106:15166:4629 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr9--chr1]""]" | chr9:133350052-chr1:149849751 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | ||||
| RPL36A--RPL36AP54 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RPL36A^ENSG00000241343.10 | chrX:101391521:+ | RPL36AP54^ENSG00000226107.1 | chrX:134522767:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1320:22455:17927 | . | NO_LDAS | 0.0034 | GT | 1.2867 | AG | 1.8295 | "[""INTRACHROMOSOMAL[chrX:33.13Mb]""]" | chrX:101391521-chrX:134522767 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| RPL36--AP002528.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RPL36^ENSG00000130255.13 | chr19:5691667:+ | AP002528.1^ENSG00000287397.1 | chr6:101454123:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2196:23846:27960 | . | NO_LDAS | 0.0034 | GC | 1.8295 | AG | 1.4295 | "[""INTERCHROMOSOMAL[chr19--chr6]""]" | chr19:5691667-chr6:101454123 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| RPL23AP43--RPL23AP34 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | RPL23AP43^ENSG00000227337.1 | chr3:32786005:+ | RPL23AP34^ENSG00000225991.1 | chr2:28308249:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1420:36831:28702 | . | NO_LDAS | 0.0017 | GT | 1.8892 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr3--chr2]""]" | chr3:32786005-chr2:28308249 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| RPL23AP43--AL365356.2 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | RPL23AP43^ENSG00000227337.1 | chr3:32786005:+ | AL365356.2^ENSG00000228685.1 | chr10:5625022:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1420:36831:28702 | . | NO_LDAS | 0.0017 | GT | 1.8892 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr3--chr10]""]" | chr3:32786005-chr10:5625022 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| RPL22P8--RPL22P18 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | RPL22P8^ENSG00000237745.1 | chr2:107915126:+ | RPL22P18^ENSG00000230171.1 | chr10:80126126:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1483:39767:20197 | . | NO_LDAS | 0.0017 | AT | 1.9086 | AC | 1.7465 | "[""INTERCHROMOSOMAL[chr2--chr10]""]" | chr2:107915126-chr10:80126126 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| RPL22P16--RPL22P22 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | RPL22P16^ENSG00000213935.3 | chr7:4865586:- | RPL22P22^ENSG00000213653.4 | chrX:82506628:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1483:39767:20197 | . | NO_LDAS | 0.0017 | AT | 1.9656 | AC | 1.7465 | "[""INTERCHROMOSOMAL[chr7--chrX]""]" | chr7:4865586-chrX:82506628 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| RPL21P6--RPS6 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RPL21P6^ENSG00000239199.1 | chr14:55413802:- | RPS6^ENSG00000137154.13 | chr9:19376388:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1164:33781:25241 | . | NO_LDAS | 0.0034 | GT | 1.7968 | AG | 1.5628 | "[""INTERCHROMOSOMAL[chr14--chr9]""]" | chr14:55413802-chr9:19376388 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| RPL14P5--RPL14P1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RPL14P5^ENSG00000225661.7 | chrX:1009110:- | RPL14P1^ENSG00000139239.7 | chr12:62965905:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2128:9834:12742 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chrY--chr12]""]" | chrX:1009110-chr12:62965905 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 1 | |||
| RPL13AP3--EMC10 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | RPL13AP3^ENSG00000177350.6 | chr14:55766732:+ | EMC10^ENSG00000161671.17 | chr19:50488632:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1419:29266:1224 | . | NO_LDAS | 0.0017 | GT | 1.5656 | AG | 1.3996 | "[""INTERCHROMOSOMAL[chr14--chr19]""]" | chr14:55766732-chr19:50488632 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| RPL13A--NPHP4 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RPL13A^ENSG00000142541.18 | chr19:49490295:+ | NPHP4^ENSG00000131697.18 | chr1:5879491:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1145:21476:15475 | . | NO_LDAS | 0.0034 | GT | 1.7465 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr19--chr1]""]" | chr19:49490295-chr1:5879491 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| RPL12P8--RPL12P48 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RPL12P8^ENSG00000219932.6 | chr10:67874542:+ | RPL12P48^ENSG00000270865.1 | chr8:37983184:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1235:42024:18641 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr10--chr8]""]" | chr10:67874542-chr8:37983184 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| RPL10--RFXANK | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RPL10^ENSG00000147403.18 | chrX:154402974:+ | RFXANK^ENSG00000064490.14 | chr19:19193939:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2319:43262:11958 | . | NO_LDAS | 0.0034 | GT | 1.7968 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chrX--chr19]""]" | chrX:154402974-chr19:19193939 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| RORA--CHFR | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RORA^ENSG00000069667.16 | chr15:60592387:- | CHFR^ENSG00000072609.18 | chr12:132945797:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1237:5450:18319 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr15--chr12]""]" | chr15:60592387-chr12:132945797 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| RORA--B2M | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RORA^ENSG00000069667.16 | chr15:61229053:- | B2M^ENSG00000166710.21 | chr15:44715423:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1170:12698:22635 | . | YES_LDAS | 0.0034 | GT | 1.5656 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr15:15.77Mb]""]" | chr15:61229053-chr15:44715423 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| RORA--ARL14EP | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RORA^ENSG00000069667.16 | chr15:60592387:- | ARL14EP^ENSG00000152219.5 | chr11:30330886:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1435:31200:29599 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr15--chr11]""]" | chr15:60592387-chr11:30330886 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| ROCK2--GALNT5 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ROCK2^ENSG00000134318.14 | chr2:11197180:- | GALNT5^ENSG00000136542.9 | chr2:157312709:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2229:36669:28002 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.6402 | "[""INTRACHROMOSOMAL[chr2:145.91Mb]""]" | chr2:11197180-chr2:157312709 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| RNU6-48P--POLR2C | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RNU6-48P^ENSG00000206888.1 | chr1:27325325:+ | POLR2C^ENSG00000102978.13 | chr16:57470035:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1236:4236:23672 | . | NO_LDAS | 0.0034 | GT | 1.7232 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr1--chr16]""]" | chr1:27325325-chr16:57470035 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| RNU6-301P--RNU6-1067P | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | RNU6-301P^ENSG00000207004.1 | chr14:51724137:+ | RNU6-1067P^ENSG00000207483.1 | chr10:28667956:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2349:49969:4825 | . | NO_LDAS | 0.0011 | GT | 1.8892 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr14--chr10]""]" | chr14:51724137-chr10:28667956 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| RNU6-13P--SLC10A3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RNU6-13P^ENSG00000206975.1 | chr8:56917190:+ | SLC10A3^ENSG00000126903.16 | chrX:154489130:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1323:47582:2065 | . | YES_LDAS | 0.0034 | GT | 1.7232 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr8--chrX]""]" | chr8:56917190-chrX:154489130 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| RNU2-1--ARL4D | 1 | 0 | 0.08 | 0.0 | INCL_NON_REF_SPLICE | RNU2-1^ENSG00000274585.1 | chr17:43233751:- | ARL4D^ENSG00000175906.5 | chr17:43399661:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1340:26330:6255 | . | YES_LDAS | 0.0003 | GT | 1.4295 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr17:0.17Mb]""]" | chr17:43233751-chr17:43399661 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | ||||
| RNLS--XIST | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RNLS^ENSG00000184719.12 | chr10:88572903:- | XIST^ENSG00000229807.12 | chrX:73831274:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1490:47412:19342 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr10--chrX]""]" | chr10:88572903-chrX:73831274 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| RNF44--SNRK | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RNF44^ENSG00000146083.12 | chr5:176530848:- | SNRK^ENSG00000163788.14 | chr3:43348080:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1360:11274:18740 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.6729 | "[""INTERCHROMOSOMAL[chr5--chr3]""]" | chr5:176530848-chr3:43348080 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| RNF39--AL158071.3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RNF39^ENSG00000204618.9 | chr6:30075223:- | AL158071.3^ENSG00000237422.2 | chr9:91119273:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1401:8855:14130 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chr6--chr9]""]" | chr6:30075223-chr9:91119273 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| RNF34--CAB39 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RNF34^ENSG00000170633.16 | chr12:121417911:+ | CAB39^ENSG00000135932.11 | chr2:230759959:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1123:25674:29445 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr12--chr2]""]" | chr12:121417911-chr2:230759959 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| RNF220--EIF5A | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RNF220^ENSG00000187147.18 | chr1:44643357:+ | EIF5A^ENSG00000132507.18 | chr17:7312108:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1402:20634:16259 | . | NO_LDAS | 0.0034 | GT | 1.231 | AG | 0.3534 | "[""INTERCHROMOSOMAL[chr1--chr17]""]" | chr1:44643357-chr17:7312108 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| RNF214--SCAPER | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RNF214^ENSG00000167257.11 | chr11:117246948:+ | SCAPER^ENSG00000140386.13 | chr15:76862533:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2328:32041:2948 | . | YES_LDAS | 0.0034 | GT | 1.5628 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr11--chr15]""]" | chr11:117246948-chr15:76862533 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| RNF213--FAM72B | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RNF213^ENSG00000173821.19 | chr17:80289837:+ | FAM72B^ENSG00000188610.12 | chr1:121184133:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1428:37243:1448 | . | NO_LDAS | 0.0034 | GT | 1.5628 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr17--chr1]""]" | chr17:80289837-chr1:121184133 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| RNF19A--REV3L | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RNF19A^ENSG00000034677.13 | chr8:100259107:- | REV3L^ENSG00000009413.16 | chr6:111416472:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1303:23183:3242 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr8--chr6]""]" | chr8:100259107-chr6:111416472 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| RNF185--RNF5 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RNF185^ENSG00000138942.16 | chr22:31192702:+ | RNF5^ENSG00000204308.8 | chr6:32179651:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1470:22908:29669 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8295 | "[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr22--chr6]""]" | chr22:31192702-chr6:32179651 | False | 0 | Excluded | annotation | pattern: | HGNC_GENEFAM | FAIL | 1 | |||
| RNF170--CMTR1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RNF170^ENSG00000120925.16 | chr8:42887728:- | CMTR1^ENSG00000137200.13 | chr6:37458612:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1213:1485:3102 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr8--chr6]""]" | chr8:42887728-chr6:37458612 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| RNF152--AC105094.2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RNF152^ENSG00000176641.11 | chr18:61892795:- | AC105094.2^ENSG00000267175.5 | chr18:61693273:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2243:1785:15082 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.9219 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr18:0.06Mb]"",""NEIGHBORS[59235]""]" | chr18:61892795-chr18:61693273 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | ||||
| RNF130--TPSAB1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RNF130^ENSG00000113269.14 | chr5:179913748:- | TPSAB1^ENSG00000172236.18 | chr16:1241208:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1313:29404:4461 | . | NO_LDAS | 0.0034 | GT | 1.8323 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr5--chr16]""]" | chr5:179913748-chr16:1241208 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| RNF126--CDC16 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RNF126^ENSG00000070423.18 | chr19:663047:- | CDC16^ENSG00000130177.16 | chr13:114236645:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1114:24599:23153 | . | YES_LDAS | 0.0034 | GT | 1.3996 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr19--chr13]""]" | chr19:663047-chr13:114236645 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| RNASET2--KCNN2 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | RNASET2^ENSG00000026297.16 | chr6:166956926:- | KCNN2^ENSG00000080709.16 | chr5:114363053:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1116:46425:21388 | . | NO_LDAS | 0.0011 | GT | 1.371 | AG | 1.1589 | "[""INTERCHROMOSOMAL[chr6--chr5]""]" | chr6:166956926-chr5:114363053 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| RNASEH2B--THEM5 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RNASEH2B^ENSG00000136104.21 | chr13:50971818:+ | THEM5^ENSG00000196407.12 | chr1:151847349:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1307:44330:13443 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.6049 | "[""INTERCHROMOSOMAL[chr13--chr1]""]" | chr13:50971818-chr1:151847349 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| RNA5SP370--COL9A3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RNA5SP370^ENSG00000199415.1 | chr12:104125326:+ | COL9A3^ENSG00000092758.18 | chr20:62826807:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1120:8904:17801 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr12--chr20]""]" | chr12:104125326-chr20:62826807 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| RNA5SP150--RNA5SP242 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RNA5SP150^ENSG00000199839.1 | chr3:181822933:- | RNA5SP242^ENSG00000201041.1 | chr7:128697497:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2373:27034:22467 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr3--chr7]""]" | chr3:181822933-chr7:128697497 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| RN7SL471P--RN7SL610P | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | RN7SL471P^ENSG00000263426.2 | chr6:28977682:+ | RN7SL610P^ENSG00000243847.3 | chr2:23996883:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2265:31176:2822 | . | NO_LDAS | 0.0011 | GT | 1.5656 | AG | 1.9329 | "[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr6--chr2]""]" | chr6:28977682-chr2:23996883 | False | 0 | Excluded | annotation | pattern: | HGNC_GENEFAM | FAIL | 1 | |||
| RN7SL417P--RN7SL665P | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RN7SL417P^ENSG00000244056.3 | chr15:84394176:+ | RN7SL665P^ENSG00000264169.2 | chr9:130400392:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2314:32705:29655 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9656 | "[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr15--chr9]""]" | chr15:84394176-chr9:130400392 | False | 0 | Excluded | annotation | pattern: | HGNC_GENEFAM | FAIL | 1 | |||
| RN7SKP227--RN7SKP25 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | RN7SKP227^ENSG00000201315.1 | chr3:36685340:+ | RN7SKP25^ENSG00000199319.1 | chr3:142673830:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2331:7270:27693 | . | NO_LDAS | 0.0011 | GT | 1.8892 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr3:105.99Mb]""]" | chr3:36685340-chr3:142673830 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| RN7SKP227--RN7SKP246 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | RN7SKP227^ENSG00000201315.1 | chr3:36685340:+ | RN7SKP246^ENSG00000201423.1 | chr5:144535438:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2331:7270:27693 | . | NO_LDAS | 0.0011 | GT | 1.8892 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr3--chr5]""]" | chr3:36685340-chr5:144535438 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| RN7SKP227--RN7SKP186 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | RN7SKP227^ENSG00000201315.1 | chr3:36685340:+ | RN7SKP186^ENSG00000202241.1 | chr6:30864481:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2331:7270:27693 | . | NO_LDAS | 0.0011 | GT | 1.8892 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr3--chr6]""]" | chr3:36685340-chr6:30864481 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| RMND5B--EPHA10 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RMND5B^ENSG00000145916.19 | chr5:178147831:+ | EPHA10^ENSG00000183317.17 | chr1:37717579:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2137:39686:23027 | . | NO_LDAS | 0.0034 | GT | 1.8062 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr5--chr1]""]" | chr5:178147831-chr1:37717579 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| RIC1--AOPEP | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RIC1^ENSG00000107036.12 | chr9:5690038:+ | AOPEP^ENSG00000148120.17 | chr9:95060694:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2284:30836:22103 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr9:88.95Mb]""]" | chr9:5690038-chr9:95060694 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| RHOT2--AL356124.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RHOT2^ENSG00000140983.14 | chr16:668569:+ | AL356124.1^ENSG00000226149.6 | chr6:129523216:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1349:35099:15082 | . | NO_LDAS | 0.0034 | GT | 1.9899 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr16--chr6]""]" | chr16:668569-chr6:129523216 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| RHEBL1--CTSB | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RHEBL1^ENSG00000167550.11 | chr12:49064715:- | CTSB^ENSG00000164733.22 | chr8:11845222:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2112:48626:16175 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr12--chr8]""]" | chr12:49064715-chr8:11845222 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| RHBDF1--WDR91 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | RHBDF1^ENSG00000007384.15 | chr16:60079:- | WDR91^ENSG00000105875.14 | chr7:135209746:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1430:27317:25143 | . | NO_LDAS | 0.0011 | GT | 1.7819 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr16--chr7]""]" | chr16:60079-chr7:135209746 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| RGS3--E4F1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RGS3^ENSG00000138835.22 | chr9:113581025:+ | E4F1^ENSG00000167967.16 | chr16:2229570:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1418:22697:2177 | . | NO_LDAS | 0.0034 | GT | 1.5546 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr9--chr16]""]" | chr9:113581025-chr16:2229570 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| RGS3--AP006621.1 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | RGS3^ENSG00000138835.22 | chr9:113584073:+ | AP006621.1^ENSG00000255108.1 | chr11:824673:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1331:47542:10150 | . | NO_LDAS | 0.0011 | GT | 1.3996 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr9--chr11]""]" | chr9:113584073-chr11:824673 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| RGS22--TRMT13 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RGS22^ENSG00000132554.20 | chr8:100131132:- | TRMT13^ENSG00000122435.10 | chr1:100136882:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1206:34185:21710 | . | NO_LDAS | 0.0034 | GT | 1.9899 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr8--chr1]""]" | chr8:100131132-chr1:100136882 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| RFX1--AP000721.2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RFX1^ENSG00000132005.9 | chr19:13993525:- | AP000721.2^ENSG00000256824.1 | chr11:64103581:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1491:51012:22018 | . | NO_LDAS | 0.0034 | GT | 1.8062 | AG | 0.9056 | "[""INTERCHROMOSOMAL[chr19--chr11]""]" | chr19:13993525-chr11:64103581 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| REV3L--L3MBTL3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | REV3L^ENSG00000009413.16 | chr6:111482750:- | L3MBTL3^ENSG00000198945.8 | chr6:130022227:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1223:19817:21402 | . | YES_LDAS | 0.0034 | GT | 1.5219 | AG | 1.8295 | "[""INTRACHROMOSOMAL[chr6:18.53Mb]""]" | chr6:111482750-chr6:130022227 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| REST--NDUFB1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | REST^ENSG00000084093.19 | chr4:56912657:+ | NDUFB1^ENSG00000183648.11 | chr14:92117642:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1384:40811:9057 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr4--chr14]""]" | chr4:56912657-chr14:92117642 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| REPS1--HECA | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | REPS1^ENSG00000135597.19 | chr6:138987530:- | HECA^ENSG00000112406.5 | chr6:139166284:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2124:5636:21416 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr6:0.15Mb]""]" | chr6:138987530-chr6:139166284 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| RELL1--AC233699.1 | 1 | 0 | 0.25 | 0.0 | ONLY_REF_SPLICE | RELL1^ENSG00000181826.10 | chr4:37686200:- | AC233699.1^ENSG00000261499.2 | chr17:36315195:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1346:22600:14087 | . | NO_LDAS | 0.0009 | GT | 1.5058 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr4--chr17]""]" | chr4:37686200-chr17:36315195 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| RELCH--ZNF431 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RELCH^ENSG00000134444.15 | chr18:62232427:+ | ZNF431^ENSG00000196705.8 | chr19:21189865:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1277:15344:21864 | . | YES_LDAS | 0.0034 | GT | 1.7056 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr18--chr19]""]" | chr18:62232427-chr19:21189865 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| RDH13--CIRBP | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RDH13^ENSG00000160439.16 | chr19:55047387:- | CIRBP^ENSG00000099622.14 | chr19:1270928:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1334:33570:17394 | . | YES_LDAS | 0.0034 | GT | 1.6402 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr19:53.76Mb]""]" | chr19:55047387-chr19:1270928 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| RCOR3--EXOC4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RCOR3^ENSG00000117625.14 | chr1:211267870:+ | EXOC4^ENSG00000131558.15 | chr7:133288922:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1102:13426:28548 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr1--chr7]""]" | chr1:211267870-chr7:133288922 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| RCOR1--GARNL3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RCOR1^ENSG00000089902.10 | chr14:102593325:+ | GARNL3^ENSG00000136895.19 | chr9:127311636:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2391:45665:28030 | . | YES_LDAS | 0.0034 | GT | 1.7232 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr14--chr9]""]" | chr14:102593325-chr9:127311636 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| RCC1L--TOP2B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RCC1L^ENSG00000274523.5 | chr7:75052711:- | TOP2B^ENSG00000077097.15 | chr3:25645470:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1282:9478:8286 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr7--chr3]""]" | chr7:75052711-chr3:25645470 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| RC3H1--C12orf57 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RC3H1^ENSG00000135870.12 | chr1:173943442:- | C12orf57^ENSG00000111678.11 | chr12:6943435:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2354:32009:15839 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.5329 | "[""INTERCHROMOSOMAL[chr1--chr12]""]" | chr1:173943442-chr12:6943435 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| RBPJ--LIMCH1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RBPJ^ENSG00000168214.21 | chr4:26362628:+ | LIMCH1^ENSG00000064042.18 | chr4:41661420:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1255:23676:14017 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.7465 | "[""INTRACHROMOSOMAL[chr4:14.92Mb]""]" | chr4:26362628-chr4:41661420 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| RBMY2TP--CRAMP1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RBMY2TP^ENSG00000237269.1 | chrY:21430784:- | CRAMP1^ENSG00000007545.16 | chr16:1662490:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1408:5344:24611 | . | NO_LDAS | 0.0034 | GT | 1.6402 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chrY--chr16]""]" | chrY:21430784-chr16:1662490 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| RBMS3--OSBPL10 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RBMS3^ENSG00000144642.22 | chr3:29281756:+ | OSBPL10^ENSG00000144645.15 | chr3:31876512:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1265:6728:18487 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr3:1.65Mb]""]" | chr3:29281756-chr3:31876512 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| RBMS1--CLIP4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RBMS1^ENSG00000153250.20 | chr2:160367216:- | CLIP4^ENSG00000115295.20 | chr2:29121374:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2231:22859:6269 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr2:131.08Mb]""]" | chr2:160367216-chr2:29121374 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| RBM3--SSX4 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | RBM3^ENSG00000102317.18 | chrX:48576604:+ | SSX4^ENSG00000268009.6 | chrX:48384050:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1192:5587:16652 | . | NO_LDAS | 0.0017 | GT | 1.8892 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chrX:0.18Mb]""]" | chrX:48576604-chrX:48384050 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| RBBP4--TULP4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RBBP4^ENSG00000162521.19 | chr1:32657572:+ | TULP4^ENSG00000130338.13 | chr6:158461563:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1368:3451:21976 | . | NO_LDAS | 0.0034 | GT | 1.5628 | AG | 1.9219 | "[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr1--chr6]""]" | chr1:32657572-chr6:158461563 | False | 0 | Excluded | annotation | pattern: | HGNC_GENEFAM | FAIL | 1 | |||
| RB1CC1--PRKDC | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RB1CC1^ENSG00000023287.13 | chr8:52714075:- | PRKDC^ENSG00000253729.8 | chr8:47807326:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1345:4568:22201 | . | YES_LDAS | 0.0034 | GT | 1.7232 | AG | 1.7232 | "[""INTRACHROMOSOMAL[chr8:4.66Mb]""]" | chr8:52714075-chr8:47807326 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| RASGRF1--MCC | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RASGRF1^ENSG00000058335.16 | chr15:79090750:- | MCC^ENSG00000171444.18 | chr5:113085310:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1232:16929:11916 | . | NO_LDAS | 0.0034 | GT | 1.4566 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr15--chr5]""]" | chr15:79090750-chr5:113085310 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| RASGEF1A--SEC16A | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RASGEF1A^ENSG00000198915.12 | chr10:43196211:- | SEC16A^ENSG00000148396.18 | chr9:136441637:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1180:38538:8202 | . | NO_LDAS | 0.0034 | GT | 1.585 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr10--chr9]""]" | chr10:43196211-chr9:136441637 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| RAPGEF3--TMEM159 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RAPGEF3^ENSG00000079337.16 | chr12:47744599:- | TMEM159^ENSG00000011638.11 | chr16:21179488:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1460:2189:21724 | . | NO_LDAS | 0.0034 | GT | 1.8256 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr12--chr16]""]" | chr12:47744599-chr16:21179488 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| RAPGEF3--AC090857.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RAPGEF3^ENSG00000079337.16 | chr12:47749390:- | AC090857.1^ENSG00000254816.1 | chr11:21170096:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1226:50406:19090 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chr12--chr11]""]" | chr12:47749390-chr11:21170096 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| RAP1B--AC090114.3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RAP1B^ENSG00000127314.18 | chr12:68671670:+ | AC090114.3^ENSG00000280828.1 | chr7:128577953:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2372:35649:18950 | . | NO_LDAS | 0.0034 | GT | 1.5058 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr12--chr7]""]" | chr12:68671670-chr7:128577953 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| RANBP10--UBE2D2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RANBP10^ENSG00000141084.11 | chr16:67805428:- | UBE2D2^ENSG00000131508.16 | chr5:139600372:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2468:35536:17464 | . | NO_LDAS | 0.0034 | GT | 1.5628 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr16--chr5]""]" | chr16:67805428-chr5:139600372 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| RALGAPB--IHH | 1 | 0 | 0.17 | 0.0 | INCL_NON_REF_SPLICE | RALGAPB^ENSG00000170471.15 | chr20:38539825:+ | IHH^ENSG00000163501.7 | chr2:219060784:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1275:1324:3298 | . | NO_LDAS | 0.0006 | GT | 1.9656 | AG | 0.8366 | "[""INTERCHROMOSOMAL[chr20--chr2]""]" | chr20:38539825-chr2:219060784 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| RALGAPB--GSDMD | 1 | 0 | 0.17 | 0.0 | INCL_NON_REF_SPLICE | RALGAPB^ENSG00000170471.15 | chr20:38539825:+ | GSDMD^ENSG00000104518.11 | chr8:143553398:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1275:1324:3298 | . | NO_LDAS | 0.0006 | GT | 1.9656 | AG | 0.8366 | "[""INTERCHROMOSOMAL[chr20--chr8]""]" | chr20:38539825-chr8:143553398 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| RALGAPA2--TCOF1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RALGAPA2^ENSG00000188559.15 | chr20:20472894:- | TCOF1^ENSG00000070814.22 | chr5:150369529:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2246:28433:4237 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr20--chr5]""]" | chr20:20472894-chr5:150369529 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| RAD21--AL691420.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RAD21^ENSG00000164754.15 | chr8:116852024:- | AL691420.1^ENSG00000228714.4 | chr9:115325039:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1102:51676:2009 | . | NO_LDAS | 0.0034 | GT | 1.6049 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr8--chr9]""]" | chr8:116852024-chr9:115325039 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| RAD1--AC138409.2 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | RAD1^ENSG00000113456.19 | chr5:34908894:- | AC138409.2^ENSG00000215158.9 | chr5:34182867:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2180:42583:28828 | . | YES_LDAS | 0.0017 | GT | 1.9219 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr5:0.66Mb]""]" | chr5:34908894-chr5:34182867 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| RABL3--SLC38A9 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RABL3^ENSG00000144840.10 | chr3:120689272:- | SLC38A9^ENSG00000177058.12 | chr5:55652723:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1424:37486:27007 | . | NO_LDAS | 0.0034 | GT | 1.8062 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr3--chr5]""]" | chr3:120689272-chr5:55652723 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| RABGGTB--ZC3HAV1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RABGGTB^ENSG00000137955.16 | chr1:75787631:+ | ZC3HAV1^ENSG00000105939.14 | chr7:139047755:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1310:3985:19202 | . | NO_LDAS | 0.0034 | GT | 1.4566 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr1--chr7]""]" | chr1:75787631-chr7:139047755 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| RAB3GAP1--R3HDM1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RAB3GAP1^ENSG00000115839.18 | chr2:135153876:+ | R3HDM1^ENSG00000048991.16 | chr2:135631718:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2110:31305:22018 | . | YES_LDAS | 0.0034 | GT | 1.4295 | AG | 1.9086 | "[""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr2:0.36Mb]""]" | chr2:135153876-chr2:135631718 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| RAB30-DT--HADHB | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RAB30-DT^ENSG00000246067.8 | chr11:83106914:+ | HADHB^ENSG00000138029.14 | chr2:26254430:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1168:41798:1406 | . | NO_LDAS | 0.0034 | GC | 1.9086 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr11--chr2]""]" | chr11:83106914-chr2:26254430 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| RAB30--KREMEN1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RAB30^ENSG00000137502.10 | chr11:83060077:- | KREMEN1^ENSG00000183762.13 | chr22:29137342:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1394:48844:3999 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.5656 | "[""INTERCHROMOSOMAL[chr11--chr22]""]" | chr11:83060077-chr22:29137342 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 1 | |||
| RAB11FIP1--NME3 | 1 | 0 | 0.25 | 0.0 | INCL_NON_REF_SPLICE | RAB11FIP1^ENSG00000156675.16 | chr8:37872172:- | NME3^ENSG00000103024.7 | chr16:1771641:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1119:52048:6689 | . | NO_LDAS | 0.0009 | GC | 1.8295 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr8--chr16]""]" | chr8:37872172-chr16:1771641 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| PUM2--FRRS1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PUM2^ENSG00000055917.16 | chr2:20294376:- | FRRS1^ENSG00000156869.14 | chr1:99704395:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2287:12601:6465 | . | NO_LDAS | 0.0034 | GT | 1.8256 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr2--chr1]""]" | chr2:20294376-chr1:99704395 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| PTPRZ1--PTPRQ | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PTPRZ1^ENSG00000106278.12 | chr7:122040979:+ | PTPRQ^ENSG00000139304.16 | chr12:80673169:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1352:35496:21626 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.7465 | "[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr7--chr12]""]" | chr7:122040979-chr12:80673169 | False | 0 | Excluded | annotation | pattern: | HGNC_GENEFAM | FAIL | 1 | |||
| PTPRC--CSKMT | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PTPRC^ENSG00000081237.20 | chr1:198756155:+ | CSKMT^ENSG00000214756.8 | chr11:62667692:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1335:26880:5750 | . | NO_LDAS | 0.0034 | GT | 1.9899 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr1--chr11]""]" | chr1:198756155-chr11:62667692 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| PTPN2--FAM120A | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | PTPN2^ENSG00000175354.20 | chr18:12869025:- | FAM120A^ENSG00000048828.17 | chr9:93476256:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1193:35415:15517 | . | YES_LDAS | 0.0017 | GT | 1.9329 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr18--chr9]""]" | chr18:12869025-chr9:93476256 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| PTPN2--EIF4E | 1 | 0 | 0.33 | 0.0 | ONLY_REF_SPLICE | PTPN2^ENSG00000175354.20 | chr18:12869025:- | EIF4E^ENSG00000151247.13 | chr4:98901982:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2113:33295:20197 | . | YES_LDAS | 0.0011 | GT | 1.9329 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr18--chr4]""]" | chr18:12869025-chr4:98901982 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| PTPN14--MROH1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PTPN14^ENSG00000152104.12 | chr1:214390988:- | MROH1^ENSG00000179832.17 | chr8:144261307:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1172:31726:15713 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.5058 | "[""INTERCHROMOSOMAL[chr1--chr8]""]" | chr1:214390988-chr8:144261307 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 1 | |||
| PTPN13--AC010538.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PTPN13^ENSG00000163629.13 | chr4:86594789:+ | AC010538.1^ENSG00000275734.2 | chr16:89684543:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2213:11671:18277 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr4--chr16]""]" | chr4:86594789-chr16:89684543 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| PTPN1--RYR3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PTPN1^ENSG00000196396.10 | chr20:50510590:+ | RYR3^ENSG00000198838.14 | chr15:33580073:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1447:16322:16470 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr20--chr15]""]" | chr20:50510590-chr15:33580073 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| PTP4A3--ZNF653 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PTP4A3^ENSG00000184489.13 | chr8:141422273:+ | ZNF653^ENSG00000161914.10 | chr19:11505636:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2229:27543:11972 | . | NO_LDAS | 0.0034 | GT | 1.5628 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr8--chr19]""]" | chr8:141422273-chr19:11505636 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| PTMAP11--AC245052.4 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | PTMAP11^ENSG00000269907.1 | chr9:96910320:+ | AC245052.4^ENSG00000237017.1 | chr19:54124602:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1238:22900:10374 | . | NO_LDAS | 0.0017 | GT | 1.7056 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr9--chr19]""]" | chr9:96910320-chr19:54124602 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| PTDSS1--SPATA5 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PTDSS1^ENSG00000156471.13 | chr8:96273390:+ | SPATA5^ENSG00000145375.9 | chr4:123028186:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2255:8475:18684 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr8--chr4]""]" | chr8:96273390-chr4:123028186 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| PTBP1--PLB1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PTBP1^ENSG00000011304.22 | chr19:806556:+ | PLB1^ENSG00000163803.13 | chr2:28529382:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1288:30771:20673 | . | NO_LDAS | 0.0034 | GT | 1.7056 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr19--chr2]""]" | chr19:806556-chr2:28529382 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| PTBP1--C19orf25 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PTBP1^ENSG00000011304.22 | chr19:799443:+ | C19orf25^ENSG00000119559.17 | chr19:1461824:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1495:23118:14760 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.7232 | "[""INTRACHROMOSOMAL[chr19:0.65Mb]""]" | chr19:799443-chr19:1461824 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| PSMD13--ZNF544 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PSMD13^ENSG00000185627.18 | chr11:252879:+ | ZNF544^ENSG00000198131.14 | chr19:58260851:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1158:43416:26993 | . | NO_LDAS | 0.0034 | GT | 1.8256 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr11--chr19]""]" | chr11:252879-chr19:58260851 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| PSMC5--CHMP1AP1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PSMC5^ENSG00000087191.13 | chr17:63830935:+ | CHMP1AP1^ENSG00000226662.2 | chr1:27686996:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2424:2553:11061 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr17--chr1]""]" | chr17:63830935-chr1:27686996 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| PSMB7--NEK6 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PSMB7^ENSG00000136930.13 | chr9:124353559:- | NEK6^ENSG00000119408.17 | chr9:124347709:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1344:10522:19622 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr9:0.00Mb]"",""LOCAL_INVERSION:-:+:[158]""]" | chr9:124353559-chr9:124347709 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| PSMB3--AIMP1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PSMB3^ENSG00000277791.5 | chr17:38762509:+ | AIMP1^ENSG00000164022.17 | chr4:106319489:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2477:14187:15517 | . | NO_LDAS | 0.0034 | GT | 1.9899 | AG | 1.5546 | "[""INTERCHROMOSOMAL[chr17--chr4]""]" | chr17:38762509-chr4:106319489 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| PSMB1--EXOC2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PSMB1^ENSG00000008018.9 | chr6:170553130:- | EXOC2^ENSG00000112685.14 | chr6:637861:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2353:10514:28800 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.5656 | "[""INTRACHROMOSOMAL[chr6:169.84Mb]""]" | chr6:170553130-chr6:637861 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| PSMA7--CD93 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PSMA7^ENSG00000101182.15 | chr20:62137364:- | CD93^ENSG00000125810.10 | chr20:23082845:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2484:34792:12392 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.7056 | "[""INTRACHROMOSOMAL[chr20:39.05Mb]""]" | chr20:62137364-chr20:23082845 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| PSMA3-AS1--PTPRA | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PSMA3-AS1^ENSG00000257621.8 | chr14:58291635:- | PTPRA^ENSG00000132670.20 | chr20:2986765:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1180:47558:23406 | . | NO_LDAS | 0.0034 | GT | 1.6895 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr14--chr20]""]" | chr14:58291635-chr20:2986765 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| PSMA1--XKR5 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | PSMA1^ENSG00000129084.18 | chr11:14507656:- | XKR5^ENSG00000275591.5 | chr8:6821962:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2310:21694:11902 | . | NO_LDAS | 0.0017 | GT | 1.5058 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr11--chr8]""]" | chr11:14507656-chr8:6821962 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| PSG1--CEACAM5 | 1 | 0 | 0.11 | 0.0 | ONLY_REF_SPLICE | PSG1^ENSG00000231924.10 | chr19:42868756:- | CEACAM5^ENSG00000105388.16 | chr19:41718128:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1107:37696:10472 | . | NO_LDAS | 0.0004 | GT | 1.8323 | AG | 1.8062 | "[""DGD_PARALOGS"",""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr19:1.14Mb]""]" | chr19:42868756-chr19:41718128 | False | 0 | Excluded | annotation | pattern: | DGD_PARALOGS | FAIL | 1 | |||
| PRPF4B--NSD3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PRPF4B^ENSG00000112739.17 | chr6:4021466:+ | NSD3^ENSG00000147548.17 | chr8:38348215:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1172:21411:4909 | . | YES_LDAS | 0.0034 | GT | 1.5656 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr6--chr8]""]" | chr6:4021466-chr8:38348215 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| PRODH--ZDHHC5 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PRODH^ENSG00000100033.17 | chr22:18936015:- | ZDHHC5^ENSG00000156599.11 | chr11:57672021:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2215:21589:24471 | . | YES_LDAS | 0.0034 | GT | 1.5219 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr22--chr11]""]" | chr22:18936015-chr11:57672021 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| PRKDC--CHCHD7 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PRKDC^ENSG00000253729.8 | chr8:47885944:- | CHCHD7^ENSG00000170791.18 | chr8:56216433:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2404:6145:6913 | . | YES_LDAS | 0.0034 | GT | 1.7232 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr8:8.25Mb]""]" | chr8:47885944-chr8:56216433 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| PRKDC--BORCS5 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PRKDC^ENSG00000253729.8 | chr8:47840016:- | BORCS5^ENSG00000165714.11 | chr12:12465618:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1330:15149:19903 | . | NO_LDAS | 0.0034 | GT | 1.8323 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr8--chr12]""]" | chr8:47840016-chr12:12465618 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| PRKD1--PRKD3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PRKD1^ENSG00000184304.16 | chr14:29636290:- | PRKD3^ENSG00000115825.11 | chr2:37277989:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1180:1534:22439 | . | NO_LDAS | 0.0034 | GT | 1.6895 | AG | 1.6895 | "[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr14--chr2]""]" | chr14:29636290-chr2:37277989 | False | 0 | Excluded | annotation | pattern: | HGNC_GENEFAM | FAIL | 1 | |||
| PRKAG3--STARD3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PRKAG3^ENSG00000115592.11 | chr2:218826971:- | STARD3^ENSG00000131748.16 | chr17:39657775:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2130:18571:6213 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.5219 | "[""INTERCHROMOSOMAL[chr2--chr17]""]" | chr2:218826971-chr17:39657775 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| PRKAG3--DNHD1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PRKAG3^ENSG00000115592.11 | chr2:218826971:- | DNHD1^ENSG00000179532.13 | chr11:6533897:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1329:50778:4825 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr2--chr11]""]" | chr2:218826971-chr11:6533897 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| PRICKLE1--RBMS1 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | PRICKLE1^ENSG00000139174.12 | chr12:42589465:- | RBMS1^ENSG00000153250.20 | chr2:160367391:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1152:22074:1799 | . | YES_LDAS | 0.0017 | GT | 1.7465 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr12--chr2]""]" | chr12:42589465-chr2:160367391 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| PRH1--SCAPER | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PRH1^ENSG00000231887.7 | chr12:10973655:- | SCAPER^ENSG00000140386.13 | chr15:76804633:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1281:46506:23406 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr12--chr15]""]" | chr12:10973655-chr15:76804633 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| PPP2R5D--CHAT | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | PPP2R5D^ENSG00000112640.16 | chr6:42989688:+ | CHAT^ENSG00000070748.19 | chr10:49666230:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1134:17690:7320 | . | YES_LDAS | 0.0011 | GT | 1.7056 | AG | 1.1033 | "[""INTERCHROMOSOMAL[chr6--chr10]""]" | chr6:42989688-chr10:49666230 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| PPP2CB--C5orf46 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PPP2CB^ENSG00000104695.13 | chr8:30774833:- | C5orf46^ENSG00000178776.5 | chr5:147901773:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1183:42947:18389 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.3996 | "[""INTERCHROMOSOMAL[chr8--chr5]""]" | chr8:30774833-chr5:147901773 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| PPP1R9A--BOD1L1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PPP1R9A^ENSG00000158528.12 | chr7:95295009:+ | BOD1L1^ENSG00000038219.13 | chr4:13614702:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1361:8346:28548 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr7--chr4]""]" | chr7:95295009-chr4:13614702 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| PPP1R37--ZMYND8 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PPP1R37^ENSG00000104866.11 | chr19:45093527:+ | ZMYND8^ENSG00000101040.19 | chr20:47310204:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2106:34056:2065 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr19--chr20]""]" | chr19:45093527-chr20:47310204 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| PPP1R37--PDE2A | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PPP1R37^ENSG00000104866.11 | chr19:45100123:+ | PDE2A^ENSG00000186642.16 | chr11:72585382:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1110:40851:26474 | . | NO_LDAS | 0.0034 | GT | 1.8256 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr19--chr11]""]" | chr19:45100123-chr11:72585382 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| PPP1R12C--ZNF518A | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PPP1R12C^ENSG00000125503.13 | chr19:55093056:- | ZNF518A^ENSG00000177853.14 | chr10:96157488:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1171:7302:9169 | . | NO_LDAS | 0.0034 | GT | 1.6402 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr19--chr10]""]" | chr19:55093056-chr10:96157488 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| PPP1R12A--ANKS1B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PPP1R12A^ENSG00000058272.19 | chr12:79828320:- | ANKS1B^ENSG00000185046.18 | chr12:99825389:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1245:21913:6759 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8323 | "[""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr12:18.79Mb]""]" | chr12:79828320-chr12:99825389 | False | 0 | Excluded | annotation | pattern: | HGNC_GENEFAM | FAIL | 1 | |||
| PPP1CB--MDH2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PPP1CB^ENSG00000213639.10 | chr2:28752115:+ | MDH2^ENSG00000146701.12 | chr7:76048208:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2110:48569:21094 | . | NO_LDAS | 0.0034 | GC | 1.7465 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr2--chr7]""]" | chr2:28752115-chr7:76048208 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| PPME1--TCTN1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PPME1^ENSG00000214517.10 | chr11:74204445:+ | TCTN1^ENSG00000204852.17 | chr12:110616277:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1433:30715:22425 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr11--chr12]""]" | chr11:74204445-chr12:110616277 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| PPM1L--PPP2R3A | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PPM1L^ENSG00000163590.14 | chr3:160961910:+ | PPP2R3A^ENSG00000073711.11 | chr3:136026832:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2165:30092:22495 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.371 | "[""INTRACHROMOSOMAL[chr3:24.61Mb]""]" | chr3:160961910-chr3:136026832 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| PPIAP56--BAP1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | PPIAP56^ENSG00000267663.1 | chr18:12246996:+ | BAP1^ENSG00000163930.10 | chr3:52403201:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1111:26006:12728 | . | NO_LDAS | 0.0017 | GC | 1.7465 | AG | 1.4295 | "[""INTERCHROMOSOMAL[chr18--chr3]""]" | chr18:12246996-chr3:52403201 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| PPIAL4D--BAP1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | PPIAL4D^ENSG00000256374.2 | chr1:145241697:- | BAP1^ENSG00000163930.10 | chr3:52403201:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1111:26006:12728 | . | NO_LDAS | 0.0017 | GC | 1.8892 | AG | 1.4295 | "[""INTERCHROMOSOMAL[chr1--chr3]""]" | chr1:145241697-chr3:52403201 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| PPFIA4--TTC7A | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PPFIA4^ENSG00000143847.15 | chr1:203075980:+ | TTC7A^ENSG00000068724.17 | chr2:47049957:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1220:39719:21066 | . | NO_LDAS | 0.0034 | GT | 1.5546 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr1--chr2]""]" | chr1:203075980-chr2:47049957 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| POU6F1--TCTN2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | POU6F1^ENSG00000184271.17 | chr12:51204173:- | TCTN2^ENSG00000168778.13 | chr12:123679189:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1227:16986:14732 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr12:72.45Mb]""]" | chr12:51204173-chr12:123679189 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| POU2F2--TMC2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | POU2F2^ENSG00000028277.21 | chr19:42089238:- | TMC2^ENSG00000149488.14 | chr20:2641426:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1485:7221:17324 | . | NO_LDAS | 0.0034 | GT | 0.971 | AG | 1.2867 | "[""INTERCHROMOSOMAL[chr19--chr20]""]" | chr19:42089238-chr20:2641426 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| POU2F1--DAB1 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | POU2F1^ENSG00000143190.23 | chr1:167338258:+ | DAB1^ENSG00000173406.16 | chr1:58506209:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2360:30626:10332 | . | NO_LDAS | 0.0017 | GT | 1.7819 | AG | 1.9899 | "[""INTRACHROMOSOMAL[chr1:108.67Mb]""]" | chr1:167338258-chr1:58506209 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| POT1--IFT80 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | POT1^ENSG00000128513.16 | chr7:124928815:- | IFT80^ENSG00000068885.15 | chr3:160319939:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1449:23579:19594 | . | YES_LDAS | 0.0034 | GT | 1.6402 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr7--chr3]""]" | chr7:124928815-chr3:160319939 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| POLR2J--AL355870.2 | 1 | 0 | 0.25 | 0.0 | INCL_NON_REF_SPLICE | POLR2J^ENSG00000005075.15 | chr7:102474361:- | AL355870.2^ENSG00000286514.1 | chr10:13391370:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2202:49953:28002 | . | NO_LDAS | 0.0009 | GT | 1.8295 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr7--chr10]""]" | chr7:102474361-chr10:13391370 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| POLR2J--AC004980.3 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | POLR2J^ENSG00000005075.15 | chr7:102474393:- | AC004980.3^ENSG00000230305.2 | chr7:76527766:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1151:6744:22159 | . | YES_LDAS | 0.0017 | GT | 1.7465 | AG | 1.7465 | "[""INTRACHROMOSOMAL[chr7:25.94Mb]""]" | chr7:102474393-chr7:76527766 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| POLR2J--AC004951.2 | 1 | 0 | 0.33 | 0.0 | ONLY_REF_SPLICE | POLR2J^ENSG00000005075.15 | chr7:102474361:- | AC004951.2^ENSG00000239556.4 | chr7:43988247:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2143:41458:14214 | . | YES_LDAS | 0.0011 | GT | 1.8295 | AG | 1.7465 | "[""INTRACHROMOSOMAL[chr7:58.48Mb]""]" | chr7:102474361-chr7:43988247 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| PNPLA7--EMSY | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PNPLA7^ENSG00000130653.16 | chr9:137547309:- | EMSY^ENSG00000158636.16 | chr11:76544578:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1423:13928:21290 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.4295 | "[""INTERCHROMOSOMAL[chr9--chr11]""]" | chr9:137547309-chr11:76544578 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| PNMA8B--BARHL1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | PNMA8B^ENSG00000204851.7 | chr19:46493961:- | BARHL1^ENSG00000125492.10 | chr9:132589920:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1250:15133:28674 | . | NO_LDAS | 0.0017 | GT | 1.6729 | AG | 1.1033 | "[""INTERCHROMOSOMAL[chr19--chr9]""]" | chr19:46493961-chr9:132589920 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| PMM1--ANKZF1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PMM1^ENSG00000100417.12 | chr22:41584044:- | ANKZF1^ENSG00000163516.14 | chr2:219232619:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2125:31119:29375 | . | NO_LDAS | 0.0034 | GT | 1.9899 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr22--chr2]""]" | chr22:41584044-chr2:219232619 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| PLXNB3--CNNM2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PLXNB3^ENSG00000198753.12 | chrX:153778661:+ | CNNM2^ENSG00000148842.18 | chr10:103078688:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2257:5150:8160 | . | NO_LDAS | 0.0034 | GT | 1.5628 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chrX--chr10]""]" | chrX:153778661-chr10:103078688 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| PLXDC2--NEBL | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PLXDC2^ENSG00000120594.17 | chr10:20068239:+ | NEBL^ENSG00000078114.19 | chr10:20869841:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2149:48189:1743 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.7056 | "[""INTRACHROMOSOMAL[chr10:0.49Mb]""]" | chr10:20068239-chr10:20869841 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| PLPP3--PCNX2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PLPP3^ENSG00000162407.9 | chr1:56578878:- | PCNX2^ENSG00000135749.19 | chr1:233236980:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1292:30998:15517 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8323 | "[""INTRACHROMOSOMAL[chr1:176.34Mb]""]" | chr1:56578878-chr1:233236980 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| PLPP2--NAB1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PLPP2^ENSG00000141934.10 | chr19:291285:- | NAB1^ENSG00000138386.17 | chr2:190649846:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2340:33886:3901 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr19--chr2]""]" | chr19:291285-chr2:190649846 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| PLP2--ARPP21 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PLP2^ENSG00000102007.11 | chrX:49173441:+ | ARPP21^ENSG00000172995.16 | chr3:35641020:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2222:48844:23448 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chrX--chr3]""]" | chrX:49173441-chr3:35641020 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| PLEKHO1--RUNX1T1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PLEKHO1^ENSG00000023902.14 | chr1:150150036:+ | RUNX1T1^ENSG00000079102.16 | chr8:92103176:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2262:9705:2709 | . | NO_LDAS | 0.0034 | GT | 1.053 | AG | 1.053 | "[""INTERCHROMOSOMAL[chr1--chr8]""]" | chr1:150150036-chr8:92103176 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| PLEKHO1--AL356512.1 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | PLEKHO1^ENSG00000023902.14 | chr1:150150040:+ | AL356512.1^ENSG00000272195.1 | chr1:244970724:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2145:32478:2191 | . | NO_LDAS | 0.0011 | GT | 1.3753 | AG | 1.053 | "[""INTRACHROMOSOMAL[chr1:94.80Mb]""]" | chr1:150150040-chr1:244970724 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 1 | |||
| PLEKHD1--RAPGEF3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PLEKHD1^ENSG00000175985.10 | chr14:69528476:+ | RAPGEF3^ENSG00000079337.16 | chr12:47737181:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1113:23142:16231 | . | NO_LDAS | 0.0034 | GT | 0.7219 | AG | 1.5628 | "[""INTERCHROMOSOMAL[chr14--chr12]""]" | chr14:69528476-chr12:47737181 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| PLCD1--TRANK1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PLCD1^ENSG00000187091.14 | chr3:38024337:- | TRANK1^ENSG00000168016.15 | chr3:36908454:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1130:46846:27665 | . | YES_LDAS | 0.0034 | GT | 1.7232 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr3:1.06Mb]""]" | chr3:38024337-chr3:36908454 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| PKP4--CCDC148 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PKP4^ENSG00000144283.22 | chr2:158533316:+ | CCDC148^ENSG00000153237.18 | chr2:158250912:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2110:2489:4643 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9656 | "[""DEEPEST2019"",""ChimerSeq"",""INTRACHROMOSOMAL[chr2:0.00Mb]"",""LOCAL_INVERSION:+:-:[199]""]" | chr2:158533316-chr2:158250912 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| PKP4--AP002856.4 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PKP4^ENSG00000144283.22 | chr2:158680718:+ | AP002856.4^ENSG00000237612.1 | chr11:131251399:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1402:43351:12308 | . | NO_LDAS | 0.0034 | GT | 1.3383 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr2--chr11]""]" | chr2:158680718-chr11:131251399 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| PKNOX2--MEIS3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PKNOX2^ENSG00000165495.16 | chr11:125385722:+ | MEIS3^ENSG00000105419.18 | chr19:47417350:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2102:34072:23980 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9656 | "[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr11--chr19]""]" | chr11:125385722-chr19:47417350 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 |
| PITPNA--TACC1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PITPNA^ENSG00000174238.15 | chr17:1535441:- | TACC1^ENSG00000147526.20 | chr8:38843397:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1213:45762:10963 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr17--chr8]""]" | chr17:1535441-chr8:38843397 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| PIP5K1C--RRAS | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PIP5K1C^ENSG00000186111.11 | chr19:3661871:- | RRAS^ENSG00000126458.4 | chr19:49640123:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2105:37866:13821 | . | NO_LDAS | 0.0034 | GT | 1.6895 | AG | 1.5656 | "[""INTRACHROMOSOMAL[chr19:45.93Mb]""]" | chr19:3661871-chr19:49640123 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| PIP5K1A--RAI14 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PIP5K1A^ENSG00000143398.20 | chr1:151199081:+ | RAI14^ENSG00000039560.14 | chr5:34667259:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1253:3662:19762 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr1--chr5]""]" | chr1:151199081-chr5:34667259 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| PIP4K2B--EZH1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PIP4K2B^ENSG00000276293.5 | chr17:38777687:- | EZH1^ENSG00000108799.13 | chr17:42709937:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1431:20675:25802 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.8295 | "[""INTRACHROMOSOMAL[chr17:3.90Mb]""]" | chr17:38777687-chr17:42709937 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| PINX1--RP1L1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PINX1^ENSG00000254093.9 | chr8:10820193:- | RP1L1^ENSG00000183638.6 | chr8:10623220:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1298:18936:25536 | . | YES_LDAS | 0.0034 | GT | 1.8062 | AG | 1.4566 | "[""INTRACHROMOSOMAL[chr8:0.05Mb]"",""NEIGHBORS[52774]""]" | chr8:10820193-chr8:10623220 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 |
| PINK1--TNRC6B | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PINK1^ENSG00000158828.8 | chr1:20633606:+ | TNRC6B^ENSG00000100354.21 | chr22:40262152:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1280:1364:3816 | . | NO_LDAS | 0.0034 | GC | 1.7819 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr1--chr22]""]" | chr1:20633606-chr22:40262152 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| PIKFYVE--PCYT1A | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PIKFYVE^ENSG00000115020.17 | chr2:208340062:+ | PCYT1A^ENSG00000161217.12 | chr3:196239666:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1343:5094:29221 | . | NO_LDAS | 0.0034 | GT | 1.6402 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chr2--chr3]""]" | chr2:208340062-chr3:196239666 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| PIAS2--ZFPM2 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | PIAS2^ENSG00000078043.16 | chr18:46917356:- | ZFPM2^ENSG00000169946.14 | chr8:104703779:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2303:10223:27932 | . | NO_LDAS | 0.0017 | GT | 0.9968 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr18--chr8]""]" | chr18:46917356-chr8:104703779 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| PIAS2--TRIM24 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | PIAS2^ENSG00000078043.16 | chr18:46917356:- | TRIM24^ENSG00000122779.18 | chr7:138589618:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2303:10223:27932 | . | NO_LDAS | 0.0017 | GT | 0.9968 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr18--chr7]""]" | chr18:46917356-chr7:138589618 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| PI4KA--PDCD11 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PI4KA^ENSG00000241973.11 | chr22:20729632:- | PDCD11^ENSG00000148843.15 | chr10:103442399:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2426:35844:17913 | . | NO_LDAS | 0.0034 | GT | 1.5656 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr22--chr10]""]" | chr22:20729632-chr10:103442399 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| PHLDB3--CNTNAP1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PHLDB3^ENSG00000176531.10 | chr19:43497118:- | CNTNAP1^ENSG00000108797.12 | chr17:42684104:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1208:31669:1378 | . | NO_LDAS | 0.0034 | GT | 1.8256 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr19--chr17]""]" | chr19:43497118-chr17:42684104 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| PHF2P2--ZMYM2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PHF2P2^ENSG00000226057.7 | chr13:18951670:- | ZMYM2^ENSG00000121741.17 | chr13:19959958:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2330:25060:17675 | . | YES_LDAS | 0.0034 | GT | 1.7056 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr13:0.90Mb]""]" | chr13:18951670-chr13:19959958 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| PHBP11--KLK5 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PHBP11^ENSG00000227621.1 | chr1:223856813:- | KLK5^ENSG00000167754.13 | chr19:50952913:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1219:34662:26544 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr1--chr19]""]" | chr1:223856813-chr19:50952913 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| PGS1--SLC38A10 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PGS1^ENSG00000087157.19 | chr17:78378808:+ | SLC38A10^ENSG00000157637.13 | chr17:81253240:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1134:14486:21892 | . | YES_LDAS | 0.0034 | GT | 1.5219 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr17:2.82Mb]""]" | chr17:78378808-chr17:81253240 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| PFKP--IRAG1-AS1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PFKP^ENSG00000067057.18 | chr10:3082461:+ | IRAG1-AS1^ENSG00000177112.8 | chr11:10594117:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1223:34768:21598 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr10--chr11]""]" | chr10:3082461-chr11:10594117 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| PFKL--PFKM | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PFKL^ENSG00000141959.17 | chr21:44313143:+ | PFKM^ENSG00000152556.17 | chr12:48134232:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1119:12949:20883 | . | NO_LDAS | 0.0034 | GT | 1.7465 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr21--chr12]""]" | chr21:44313143-chr12:48134232 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| PELI2--SIPA1L1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PELI2^ENSG00000139946.10 | chr14:56178464:+ | SIPA1L1^ENSG00000197555.9 | chr14:71587571:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1461:26030:7053 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr14:15.02Mb]""]" | chr14:56178464-chr14:71587571 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| PELI1--MGAT4A | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PELI1^ENSG00000197329.12 | chr2:64144081:- | MGAT4A^ENSG00000071073.13 | chr2:98678471:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2205:34315:24765 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8323 | "[""INTRACHROMOSOMAL[chr2:34.47Mb]""]" | chr2:64144081-chr2:98678471 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| PEA15--NECTIN2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PEA15^ENSG00000162734.13 | chr1:160213510:+ | NECTIN2^ENSG00000130202.10 | chr19:44871871:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1138:27746:17198 | . | NO_LDAS | 0.0034 | GT | 0.9968 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr1--chr19]""]" | chr1:160213510-chr19:44871871 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| PDLIM7--PRSS27 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PDLIM7^ENSG00000196923.14 | chr5:177491911:- | PRSS27^ENSG00000172382.10 | chr16:2715685:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1209:9681:17268 | . | NO_LDAS | 0.0034 | GC | 1.053 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr5--chr16]""]" | chr5:177491911-chr16:2715685 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| PDLIM2--KNOP1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PDLIM2^ENSG00000120913.23 | chr8:22589741:+ | KNOP1^ENSG00000103550.14 | chr16:19710478:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1494:22188:9365 | . | NO_LDAS | 0.0034 | GT | 1.5329 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chr8--chr16]""]" | chr8:22589741-chr16:19710478 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| PDE4D--MMP24OS | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PDE4D^ENSG00000113448.19 | chr5:59893414:- | MMP24OS^ENSG00000126005.17 | chr20:35277800:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2326:39824:22873 | . | NO_LDAS | 0.0034 | GT | 1.2419 | AG | 1.1033 | "[""INTERCHROMOSOMAL[chr5--chr20]""]" | chr5:59893414-chr20:35277800 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| PDCD6IPP2--SENP3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PDCD6IPP2^ENSG00000261377.5 | chr15:28857965:+ | SENP3^ENSG00000161956.13 | chr17:7564841:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1325:10392:3340 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr15--chr17]""]" | chr15:28857965-chr17:7564841 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| PDAP1--FOXN3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PDAP1^ENSG00000106244.13 | chr7:99404862:- | FOXN3^ENSG00000053254.16 | chr14:89125106:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1305:42138:4321 | . | NO_LDAS | 0.0034 | GT | 1.5219 | AG | 1.2729 | "[""INTERCHROMOSOMAL[chr7--chr14]""]" | chr7:99404862-chr14:89125106 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| PCMTD1--PXDNL | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PCMTD1^ENSG00000168300.14 | chr8:51831444:- | PXDNL^ENSG00000147485.13 | chr8:51654760:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2470:32211:24849 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8256 | "[""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr8:0.01Mb]"",""NEIGHBORS[8130]""]" | chr8:51831444-chr8:51654760 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 |
| PCDHGB1--PCDHGA10 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PCDHGB1^ENSG00000254221.2 | chr5:141352669:+ | PCDHGA10^ENSG00000253846.2 | chr5:141494807:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1171:28635:24765 | . | YES_LDAS | 0.0034 | GT | 1.6895 | AG | 1.3383 | "[""DGD_PARALOGS"",""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr5:0.06Mb]"",""NEIGHBORS[60294]""]" | chr5:141352669-chr5:141494807 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 1 | |||
| PCDH7--DPH6 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PCDH7^ENSG00000169851.15 | chr4:30920375:+ | DPH6^ENSG00000134146.12 | chr15:35454813:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1442:49815:9323 | . | YES_LDAS | 0.0034 | GC | 1.5058 | AG | 1.2867 | "[""INTERCHROMOSOMAL[chr4--chr15]""]" | chr4:30920375-chr15:35454813 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| PATL1--CYP2R1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PATL1^ENSG00000166889.14 | chr11:59666853:- | CYP2R1^ENSG00000186104.11 | chr11:14885917:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1395:45058:29081 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.7968 | "[""INTRACHROMOSOMAL[chr11:44.74Mb]""]" | chr11:59666853-chr11:14885917 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| PARN--HNRNPC | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PARN^ENSG00000140694.17 | chr16:14555654:- | HNRNPC^ENSG00000092199.18 | chr14:21234229:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1138:17277:28997 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr16--chr14]""]" | chr16:14555654-chr14:21234229 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| PARK7--TENM2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PARK7^ENSG00000116288.13 | chr1:7969404:+ | TENM2^ENSG00000145934.16 | chr5:168126802:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2162:40827:19062 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr1--chr5]""]" | chr1:7969404-chr5:168126802 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| PARD3B--FCHO2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PARD3B^ENSG00000116117.18 | chr2:205301701:+ | FCHO2^ENSG00000157107.14 | chr5:73006445:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2316:10676:13303 | . | NO_LDAS | 0.0034 | GT | 1.8323 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr2--chr5]""]" | chr2:205301701-chr5:73006445 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| PARD3B--ARHGEF3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PARD3B^ENSG00000116117.18 | chr2:204546119:+ | ARHGEF3^ENSG00000163947.12 | chr3:56773816:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1138:11493:25255 | . | YES_LDAS | 0.0034 | GT | 1.5219 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr2--chr3]""]" | chr2:204546119-chr3:56773816 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| PALB2--CENPN | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PALB2^ENSG00000083093.10 | chr16:23629204:- | CENPN^ENSG00000166451.14 | chr16:81014136:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1384:10223:23840 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 1.8323 | "[""INTRACHROMOSOMAL[chr16:57.37Mb]""]" | chr16:23629204-chr16:81014136 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| PAK3--TUBGCP4 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | PAK3^ENSG00000077264.16 | chrX:111103183:+ | TUBGCP4^ENSG00000137822.13 | chr15:43404398:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1155:38368:7684 | . | NO_LDAS | 0.0017 | GT | 1.6895 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chrX--chr15]""]" | chrX:111103183-chr15:43404398 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| PACERR--BSX | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PACERR^ENSG00000273129.2 | chr1:186680890:+ | BSX^ENSG00000188909.5 | chr11:122977771:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1229:17811:2906 | . | NO_LDAS | 0.0034 | GT | 0.8366 | AG | 1.1589 | "[""INTERCHROMOSOMAL[chr1--chr11]""]" | chr1:186680890-chr11:122977771 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| P2RY2--LRRC8E | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | P2RY2^ENSG00000175591.12 | chr11:73235005:+ | LRRC8E^ENSG00000171017.11 | chr19:7899546:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1338:48205:15671 | . | NO_LDAS | 0.0034 | GC | 1.6402 | AG | 1.5628 | "[""INTERCHROMOSOMAL[chr11--chr19]""]" | chr11:73235005-chr19:7899546 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| OXSR1--P2RY14 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | OXSR1^ENSG00000172939.9 | chr3:38165946:+ | P2RY14^ENSG00000174944.9 | chr3:151219642:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2294:7868:8665 | . | YES_LDAS | 0.0034 | GT | 1.8295 | AG | 1.6895 | "[""INTRACHROMOSOMAL[chr3:112.96Mb]""]" | chr3:38165946-chr3:151219642 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| OSGEPL1--ORMDL1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | OSGEPL1^ENSG00000128694.12 | chr2:189752849:- | ORMDL1^ENSG00000128699.14 | chr2:189771902:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1333:12423:12910 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr2:0.01Mb]"",""LOCAL_REARRANGEMENT:-:[7040]""]" | chr2:189752849-chr2:189771902 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| OS9--SLC25A25-AS1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | OS9^ENSG00000135506.16 | chr12:57715916:+ | SLC25A25-AS1^ENSG00000234771.3 | chr9:128108996:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1145:39686:7474 | . | NO_LDAS | 0.0034 | GT | 1.8295 | AG | 1.053 | "[""INTERCHROMOSOMAL[chr12--chr9]""]" | chr12:57715916-chr9:128108996 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ORAI1--AC022509.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ORAI1^ENSG00000276045.3 | chr12:121626887:+ | AC022509.1^ENSG00000255750.6 | chr12:26231678:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1432:47647:22691 | . | NO_LDAS | 0.0034 | GT | 1.053 | AG | 1.2419 | "[""INTRACHROMOSOMAL[chr12:95.31Mb]""]" | chr12:121626887-chr12:26231678 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| OR4E1--MICU1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | OR4E1^ENSG00000276240.2 | chr14:21669437:- | MICU1^ENSG00000107745.19 | chr10:72475297:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2157:17237:17212 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr14--chr10]""]" | chr14:21669437-chr10:72475297 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| OPHN1--HIPK2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | OPHN1^ENSG00000079482.14 | chrX:68432867:- | HIPK2^ENSG00000064393.16 | chr7:139717015:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1214:38392:23560 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chrX--chr7]""]" | chrX:68432867-chr7:139717015 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| OGT--RNU5B-1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | OGT^ENSG00000147162.14 | chrX:71554592:+ | RNU5B-1^ENSG00000200156.1 | chr15:65304697:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1259:10813:24947 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chrX--chr15]""]" | chrX:71554592-chr15:65304697 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| OGDH--TRAK2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | OGDH^ENSG00000105953.15 | chr7:44676149:+ | TRAK2^ENSG00000115993.13 | chr2:201401088:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1144:33392:17703 | . | NO_LDAS | 0.0034 | GT | 1.5329 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr7--chr2]""]" | chr7:44676149-chr2:201401088 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ODF3B--RPS28 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ODF3B^ENSG00000177989.13 | chr22:50530012:- | RPS28^ENSG00000233927.5 | chr19:8321511:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1311:49022:27960 | . | NO_LDAS | 0.0034 | GT | 1.231 | AG | 1.231 | "[""INTERCHROMOSOMAL[chr22--chr19]""]" | chr22:50530012-chr19:8321511 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| OAZ1--FAM78A | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | OAZ1^ENSG00000104904.12 | chr19:2269744:+ | FAM78A^ENSG00000126882.13 | chr9:131261350:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1126:7148:17815 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr19--chr9]""]" | chr19:2269744-chr9:131261350 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| OAS1--OAS3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | OAS1^ENSG00000089127.15 | chr12:112917700:+ | OAS3^ENSG00000111331.14 | chr12:112946743:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2225:42688:10767 | . | NO_LDAS | 0.0034 | GT | 1.8062 | AG | 1.8295 | "[""INTRACHROMOSOMAL[chr12:0.00Mb]"",""NEIGHBORS[4832]""]" | chr12:112917700-chr12:112946743 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| NXPE3--CD47 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NXPE3^ENSG00000144815.16 | chr3:101807126:+ | CD47^ENSG00000196776.17 | chr3:108080344:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1387:10433:15236 | . | NO_LDAS | 0.0034 | GT | 1.6402 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr3:6.21Mb]""]" | chr3:101807126-chr3:108080344 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| NXNL1--RC3H1 | 1 | 0 | 0.17 | 0.0 | INCL_NON_REF_SPLICE | NXNL1^ENSG00000171773.3 | chr19:17455654:- | RC3H1^ENSG00000135870.12 | chr1:173982860:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1413:10627:20954 | . | NO_LDAS | 0.0006 | GT | 1.1589 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr19--chr1]""]" | chr19:17455654-chr1:173982860 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| NXNL1--C2CD2 | 1 | 0 | 0.17 | 0.0 | INCL_NON_REF_SPLICE | NXNL1^ENSG00000171773.3 | chr19:17455654:- | C2CD2^ENSG00000157617.17 | chr21:41942182:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1130:26556:29263 | . | NO_LDAS | 0.0006 | GT | 1.1589 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr19--chr21]""]" | chr19:17455654-chr21:41942182 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| NUTF2--DGLUCY | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NUTF2^ENSG00000102898.12 | chr16:67846985:+ | DGLUCY^ENSG00000133943.21 | chr14:91157639:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1237:11533:22999 | . | YES_LDAS | 0.0034 | GT | 1.6895 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr16--chr14]""]" | chr16:67846985-chr14:91157639 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| NUP50--WASHC2A | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | NUP50^ENSG00000093000.19 | chr22:45184664:+ | WASHC2A^ENSG00000099290.17 | chr10:50097681:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1474:27454:3186 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr22--chr10]""]" | chr22:45184664-chr10:50097681 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| NUF2--MFHAS1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | NUF2^ENSG00000143228.13 | chr1:163321923:+ | MFHAS1^ENSG00000147324.11 | chr8:8893550:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1118:10336:28352 | . | NO_LDAS | 0.0017 | GT | 1.7819 | AG | 1.2729 | "[""INTERCHROMOSOMAL[chr1--chr8]""]" | chr1:163321923-chr8:8893550 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| NUDT3--NUDT4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NUDT3^ENSG00000272325.2 | chr6:34293451:- | NUDT4^ENSG00000173598.14 | chr12:93399177:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2465:40180:6871 | . | NO_LDAS | 0.0034 | GT | 1.8323 | AG | 1.2867 | "[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr6--chr12]""]" | chr6:34293451-chr12:93399177 | False | 0 | Excluded | annotation | pattern: | HGNC_GENEFAM | FAIL | 1 | |||
| NUDT14--SALL3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | NUDT14^ENSG00000183828.15 | chr14:105181224:- | SALL3^ENSG00000256463.8 | chr18:78993747:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2302:43861:23532 | . | NO_LDAS | 0.0034 | GT | 1.3383 | AG | 1.5219 | "[""INTERCHROMOSOMAL[chr14--chr18]""]" | chr14:105181224-chr18:78993747 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| NUCB2--CDC42P6 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | NUCB2^ENSG00000070081.17 | chr11:17260890:+ | CDC42P6^ENSG00000237350.1 | chr4:22728000:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2155:40099:26208 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr11--chr4]""]" | chr11:17260890-chr4:22728000 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| NUAK2--NUAK1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NUAK2^ENSG00000163545.11 | chr1:205308165:- | NUAK1^ENSG00000074590.14 | chr12:106072843:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1206:6307:29725 | . | NO_LDAS | 0.0034 | GT | 1.7465 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr1--chr12]""]" | chr1:205308165-chr12:106072843 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| NTN1--ABR | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NTN1^ENSG00000065320.9 | chr17:9182969:+ | ABR^ENSG00000159842.15 | chr17:1125367:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1181:25278:25900 | . | NO_LDAS | 0.0034 | GT | 1.7968 | AG | 1.9899 | "[""INTRACHROMOSOMAL[chr17:7.79Mb]""]" | chr17:9182969-chr17:1125367 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| NT5C2--PLEKHM3 | 1 | 0 | 0.17 | 0.0 | ONLY_REF_SPLICE | NT5C2^ENSG00000076685.19 | chr10:103197765:- | PLEKHM3^ENSG00000178385.15 | chr2:207908577:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1285:16654:7095 | . | NO_LDAS | 0.0006 | GT | 1.8892 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr10--chr2]""]" | chr10:103197765-chr2:207908577 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| NSD1--FAR1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NSD1^ENSG00000165671.21 | chr5:177136030:+ | FAR1^ENSG00000197601.13 | chr11:13727556:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1222:6121:26600 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr5--chr11]""]" | chr5:177136030-chr11:13727556 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| NSD1--BMP2K | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NSD1^ENSG00000165671.21 | chr5:177192019:+ | BMP2K^ENSG00000138756.19 | chr4:78878734:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1335:21816:5414 | . | YES_LDAS | 0.0034 | GT | 1.5546 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr5--chr4]""]" | chr5:177192019-chr4:78878734 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| NRIP3--AC008786.1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | NRIP3^ENSG00000175352.11 | chr11:9003966:- | AC008786.1^ENSG00000286853.1 | chr5:58145716:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1396:19138:15769 | . | NO_LDAS | 0.0017 | GT | 1.3383 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr11--chr5]""]" | chr11:9003966-chr5:58145716 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| NRDE2--CPLANE1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NRDE2^ENSG00000119720.18 | chr14:90298260:- | CPLANE1^ENSG00000197603.16 | chr5:37175986:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1103:36766:23013 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr14--chr5]""]" | chr14:90298260-chr5:37175986 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| NRDC--INO80C | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NRDC^ENSG00000078618.22 | chr1:51790533:- | INO80C^ENSG00000153391.16 | chr18:35478349:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1231:43958:8511 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr1--chr18]""]" | chr1:51790533-chr18:35478349 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| NRBP1--NRBP2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NRBP1^ENSG00000115216.14 | chr2:27434762:+ | NRBP2^ENSG00000185189.18 | chr8:143839408:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1472:19567:17240 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr2--chr8]""]" | chr2:27434762-chr8:143839408 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| NR3C1--USP22 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NR3C1^ENSG00000113580.15 | chr5:143404376:- | USP22^ENSG00000124422.12 | chr17:21028674:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1432:33069:9519 | . | NO_LDAS | 0.0034 | GT | 1.371 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr5--chr17]""]" | chr5:143404376-chr17:21028674 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| NPNT--AL022323.3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | NPNT^ENSG00000168743.13 | chr4:105895623:+ | AL022323.3^ENSG00000279110.1 | chr22:25061816:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1273:25990:4881 | . | NO_LDAS | 0.0034 | GC | 1.6729 | AG | 1.3753 | "[""INTERCHROMOSOMAL[chr4--chr22]""]" | chr4:105895623-chr22:25061816 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| NPHP3--STRN3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NPHP3^ENSG00000113971.20 | chr3:132721963:- | STRN3^ENSG00000196792.12 | chr14:30956242:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2375:31621:9618 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr3--chr14]""]" | chr3:132721963-chr14:30956242 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| NORAD--TUT7 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | NORAD^ENSG00000260032.2 | chr20:36048516:- | TUT7^ENSG00000083223.18 | chr9:86323747:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1188:31378:4041 | . | YES_LDAS | 0.0034 | GT | 1.4295 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr20--chr9]""]" | chr20:36048516-chr9:86323747 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| NME2--NME1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NME2^ENSG00000243678.12 | chr17:51168343:+ | NME1^ENSG00000239672.8 | chr17:51161160:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1381:45770:17198 | . | YES_LDAS | 0.0034 | GT | 1.8062 | AG | 1.5546 | "[""DGD_PARALOGS"",""INTRACHROMOSOMAL[chr17:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[3007]""]" | chr17:51168343-chr17:51161160 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | ||||
| NLK--PDLIM1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NLK^ENSG00000087095.13 | chr17:28043331:+ | PDLIM1^ENSG00000107438.9 | chr10:95247366:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1483:13815:16694 | . | NO_LDAS | 0.0034 | GT | 1.3996 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr17--chr10]""]" | chr17:28043331-chr10:95247366 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| NIPBL--BASP1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NIPBL^ENSG00000164190.19 | chr5:36976402:+ | BASP1^ENSG00000176788.9 | chr5:17275208:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1278:32640:2247 | . | NO_LDAS | 0.0034 | GT | 1.6729 | AG | 1.8892 | "[""DEEPEST2019"",""TumorFusionsNAR2018"",""INTRACHROMOSOMAL[chr5:19.60Mb]""]" | chr5:36976402-chr5:17275208 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| NIBAN2--NIBAN1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NIBAN2^ENSG00000136830.12 | chr9:127517826:- | NIBAN1^ENSG00000135842.17 | chr1:184823742:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1408:4916:18964 | . | NO_LDAS | 0.0034 | GT | 1.6402 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr9--chr1]""]" | chr9:127517826-chr1:184823742 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| NFKB2--GPR153 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | NFKB2^ENSG00000077150.20 | chr10:102399462:+ | GPR153^ENSG00000158292.7 | chr1:6249640:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1112:51894:25732 | . | NO_LDAS | 0.0034 | GT | 1.5546 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr10--chr1]""]" | chr10:102399462-chr1:6249640 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| NEU1--DUS1L | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | NEU1^ENSG00000204386.12 | chr6:31861308:- | DUS1L^ENSG00000169718.18 | chr17:82061983:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1284:30609:4251 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr6--chr17]""]" | chr6:31861308-chr17:82061983 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| NEO1--COPS2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | NEO1^ENSG00000067141.17 | chr15:73178427:+ | COPS2^ENSG00000166200.15 | chr15:49119142:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1133:1485:22074 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.8295 | "[""INTRACHROMOSOMAL[chr15:23.90Mb]""]" | chr15:73178427-chr15:49119142 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| NEK9--RUFY3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | NEK9^ENSG00000119638.14 | chr14:75091434:- | RUFY3^ENSG00000018189.13 | chr4:70704817:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1298:16250:1238 | . | NO_LDAS | 0.0034 | GT | 1.053 | AG | 1.2419 | "[""INTERCHROMOSOMAL[chr14--chr4]""]" | chr14:75091434-chr4:70704817 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| NEK9--MROH1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | NEK9^ENSG00000119638.14 | chr14:75121119:- | MROH1^ENSG00000179832.17 | chr8:144192988:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1155:41871:2513 | . | NO_LDAS | 0.0034 | GT | 1.5656 | AG | 1.3383 | "[""INTERCHROMOSOMAL[chr14--chr8]""]" | chr14:75121119-chr8:144192988 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| NEDD9--PPM1B-DT | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | NEDD9^ENSG00000111859.17 | chr6:11188239:- | PPM1B-DT^ENSG00000273106.1 | chr2:44168703:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1435:27940:2794 | . | NO_LDAS | 0.0034 | AT | 1.5546 | AC | 1.053 | "[""INTERCHROMOSOMAL[chr6--chr2]""]" | chr6:11188239-chr2:44168703 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| NEDD8P1--MDP1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | NEDD8P1^ENSG00000226970.2 | chr1:84244518:+ | MDP1^ENSG00000213920.9 | chr14:24215797:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2171:48286:3929 | . | YES_LDAS | 0.0034 | GT | 1.7056 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr1--chr14]""]" | chr1:84244518-chr14:24215797 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| NECTIN4--KRT23 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | NECTIN4^ENSG00000143217.9 | chr1:161074213:- | KRT23^ENSG00000108244.17 | chr17:40925484:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2214:49694:17016 | . | NO_LDAS | 0.0034 | GT | 1.8295 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr1--chr17]""]" | chr1:161074213-chr17:40925484 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| NECTIN3--CD96 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NECTIN3^ENSG00000177707.11 | chr3:111192413:+ | CD96^ENSG00000153283.13 | chr3:111364513:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1329:23830:21542 | . | NO_LDAS | 0.0034 | GT | 1.8256 | AG | 1.9086 | "[""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr3:0.02Mb]"",""NEIGHBORS[17156]""]" | chr3:111192413-chr3:111364513 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 |
| NDUFS5--NDUFS5P2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | NDUFS5^ENSG00000168653.11 | chr1:39034556:+ | NDUFS5P2^ENSG00000234226.5 | chr1:96584461:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1111:31960:2471 | . | NO_LDAS | 0.0034 | GT | 1.9899 | AG | 1.371 | "[""INTRACHROMOSOMAL[chr1:57.55Mb]""]" | chr1:39034556-chr1:96584461 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | ||||
| NDUFS1--SMG8 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | NDUFS1^ENSG00000023228.14 | chr2:206117069:- | SMG8^ENSG00000167447.13 | chr17:59212341:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1298:1550:19244 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.3996 | "[""INTERCHROMOSOMAL[chr2--chr17]""]" | chr2:206117069-chr17:59212341 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| NDUFB4P11--AC087564.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | NDUFB4P11^ENSG00000259374.2 | chr14:103140655:+ | AC087564.1^ENSG00000285367.1 | chr16:51441063:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2203:5830:13737 | . | YES_LDAS | 0.0034 | GT | 0.9968 | AG | 0.9968 | "[""INTERCHROMOSOMAL[chr14--chr16]""]" | chr14:103140655-chr16:51441063 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| NDUFB2--KCNK9 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | NDUFB2^ENSG00000090266.13 | chr7:140697221:+ | KCNK9^ENSG00000169427.8 | chr8:139703108:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1393:37356:4755 | . | NO_LDAS | 0.0017 | GT | 0.8366 | AG | 0.9183 | "[""INTERCHROMOSOMAL[chr7--chr8]""]" | chr7:140697221-chr8:139703108 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| NDUFB2--ITIH5 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | NDUFB2^ENSG00000090266.13 | chr7:140697221:+ | ITIH5^ENSG00000123243.15 | chr10:7562828:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2167:31305:12042 | . | NO_LDAS | 0.0034 | GT | 0.8366 | AG | 1.231 | "[""INTERCHROMOSOMAL[chr7--chr10]""]" | chr7:140697221-chr10:7562828 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| NDUFAF6--LGALS3 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | NDUFAF6^ENSG00000156170.13 | chr8:95044595:+ | LGALS3^ENSG00000131981.16 | chr14:55137370:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1155:40981:2766 | . | NO_LDAS | 0.0017 | GT | 1.9329 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr8--chr14]""]" | chr8:95044595-chr14:55137370 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| NDST1--IL17RD | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | NDST1^ENSG00000070614.15 | chr5:150521192:+ | IL17RD^ENSG00000144730.19 | chr3:57097806:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1146:45730:24555 | . | YES_LDAS | 0.0034 | GT | 1.5219 | AG | 1.4566 | "[""INTERCHROMOSOMAL[chr5--chr3]""]" | chr5:150521192-chr3:57097806 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| NDRG4--LEF1 | 1 | 0 | 0.25 | 0.0 | INCL_NON_REF_SPLICE | NDRG4^ENSG00000103034.14 | chr16:58464269:+ | LEF1^ENSG00000138795.10 | chr4:108167748:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1166:17342:22999 | . | NO_LDAS | 0.0009 | GT | 1.2419 | AG | 1.3753 | "[""INTERCHROMOSOMAL[chr16--chr4]""]" | chr16:58464269-chr4:108167748 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| NDRG2--HECW1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | NDRG2^ENSG00000165795.23 | chr14:21019116:- | HECW1^ENSG00000002746.15 | chr7:43500748:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1395:2068:25493 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr14--chr7]""]" | chr14:21019116-chr7:43500748 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| NCOA4--TIMM23 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NCOA4^ENSG00000266412.6 | chr10:46009411:- | TIMM23^ENSG00000265354.4 | chr10:46003203:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1157:40447:29277 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.7968 | "[""INTRACHROMOSOMAL[chr10:0.00Mb]"",""LOCAL_INVERSION:-:+:[1346]""]" | chr10:46009411-chr10:46003203 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| NCCRP1--RPL13A | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | NCCRP1^ENSG00000188505.5 | chr19:39197319:+ | RPL13A^ENSG00000142541.18 | chr19:49490262:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1125:25488:6675 | . | NO_LDAS | 0.0011 | GT | 1.4566 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr19:10.29Mb]""]" | chr19:39197319-chr19:49490262 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| NBR2--AC005670.3 | 1 | 0 | 0.33 | 0.0 | ONLY_REF_SPLICE | NBR2^ENSG00000198496.12 | chr17:43138922:+ | AC005670.3^ENSG00000262879.6 | chr17:47033381:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1102:49006:28016 | . | YES_LDAS | 0.0011 | GT | 1.9329 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr17:3.83Mb]""]" | chr17:43138922-chr17:47033381 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| NBR1--WDR4P2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | NBR1^ENSG00000188554.15 | chr17:43186453:+ | WDR4P2^ENSG00000229462.1 | chr2:68447861:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1474:34501:9281 | . | NO_LDAS | 0.0034 | GT | 1.7465 | AG | 1.6049 | "[""INTERCHROMOSOMAL[chr17--chr2]""]" | chr17:43186453-chr2:68447861 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| NBPF9--AC021218.1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | NBPF9^ENSG00000269713.7 | chr1:149059700:- | AC021218.1^ENSG00000204876.4 | chr7:155964566:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1465:40447:27679 | . | YES_LDAS | 0.0017 | GT | 1.5546 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr1--chr7]""]" | chr1:149059700-chr7:155964566 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| NBPF9--AC021218.1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | NBPF9^ENSG00000269713.7 | chr1:149056512:- | AC021218.1^ENSG00000204876.4 | chr7:155964566:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1465:40447:27679 | . | YES_LDAS | 0.0017 | GT | 1.5546 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr1--chr7]""]" | chr1:149056512-chr7:155964566 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| NBPF12--ANKS1A | 1 | 0 | 0.04 | 0.0 | ONLY_REF_SPLICE | NBPF12^ENSG00000268043.7 | chr1:146989746:+ | ANKS1A^ENSG00000064999.15 | chr6:35017473:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1206:33311:2822 | . | YES_LDAS | 0.0001 | GT | 1.9086 | AG | 1.585 | "[""INTERCHROMOSOMAL[chr1--chr6]""]" | chr1:146989746-chr6:35017473 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| NBPF12--ANKS1A | 1 | 0 | 0.04 | 0.0 | ONLY_REF_SPLICE | NBPF12^ENSG00000268043.7 | chr1:146984985:+ | ANKS1A^ENSG00000064999.15 | chr6:35017473:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1206:33311:2822 | . | YES_LDAS | 0.0001 | GT | 1.9086 | AG | 1.585 | "[""INTERCHROMOSOMAL[chr1--chr6]""]" | chr1:146984985-chr6:35017473 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| NBPF10--AC113618.2 | 1 | 0 | 0.2 | 0.0 | INCL_NON_REF_SPLICE | NBPF10^ENSG00000271425.9 | chr1:146156480:- | AC113618.2^ENSG00000286160.2 | chr2:238715915:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1450:18054:11705 | . | NO_LDAS | 0.0007 | GT | 1.9219 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr1--chr2]""]" | chr1:146156480-chr2:238715915 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| NBPF1--PIGF | 1 | 0 | 0.08 | 0.0 | INCL_NON_REF_SPLICE | NBPF1^ENSG00000219481.10 | chr1:16589899:- | PIGF^ENSG00000151665.13 | chr2:46615181:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1363:37356:24036 | . | YES_LDAS | 0.0003 | GT | 1.8892 | AG | 1.5329 | "[""INTERCHROMOSOMAL[chr1--chr2]""]" | chr1:16589899-chr2:46615181 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| NBPF1--PIGF | 1 | 0 | 0.08 | 0.0 | INCL_NON_REF_SPLICE | NBPF1^ENSG00000219481.10 | chr1:16583594:- | PIGF^ENSG00000151665.13 | chr2:46615181:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1363:37356:24036 | . | YES_LDAS | 0.0003 | GT | 1.8892 | AG | 1.5329 | "[""INTERCHROMOSOMAL[chr1--chr2]""]" | chr1:16583594-chr2:46615181 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| NBPF1--PIGF | 1 | 0 | 0.08 | 0.0 | INCL_NON_REF_SPLICE | NBPF1^ENSG00000219481.10 | chr1:16577317:- | PIGF^ENSG00000151665.13 | chr2:46615181:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1363:37356:24036 | . | YES_LDAS | 0.0003 | GT | 1.8892 | AG | 1.5329 | "[""INTERCHROMOSOMAL[chr1--chr2]""]" | chr1:16577317-chr2:46615181 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| NBAS--PDE6A | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | NBAS^ENSG00000151779.13 | chr2:15328303:- | PDE6A^ENSG00000132915.11 | chr5:149867234:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2462:29841:17240 | . | NO_LDAS | 0.0017 | GT | 1.8062 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr2--chr5]""]" | chr2:15328303-chr5:149867234 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| NAIP--NUCKS1 | 1 | 0 | 0.2 | 0.0 | ONLY_REF_SPLICE | NAIP^ENSG00000249437.8 | chr5:70998724:- | NUCKS1^ENSG00000069275.13 | chr1:205729621:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1288:20529:18740 | . | YES_LDAS | 0.0007 | GT | 1.9329 | AG | 1.5656 | "[""INTERCHROMOSOMAL[chr5--chr1]""]" | chr5:70998724-chr1:205729621 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| NAGA--CACTIN | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | NAGA^ENSG00000198951.12 | chr22:42070591:- | CACTIN^ENSG00000105298.14 | chr19:3626700:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2178:1340:25690 | . | NO_LDAS | 0.0034 | GT | 1.4295 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr22--chr19]""]" | chr22:42070591-chr19:3626700 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| NACA4P--GABRG3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | NACA4P^ENSG00000228224.3 | chr8:101369401:+ | GABRG3^ENSG00000182256.13 | chr15:27532895:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1131:21055:7684 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chr8--chr15]""]" | chr8:101369401-chr15:27532895 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| NAA25--CCDC152 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | NAA25^ENSG00000111300.10 | chr12:112039500:- | CCDC152^ENSG00000198865.10 | chr5:42801160:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2490:46741:8735 | . | NO_LDAS | 0.0017 | GT | 1.9656 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr12--chr5]""]" | chr12:112039500-chr5:42801160 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| MYOM2--ZNF629 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MYOM2^ENSG00000036448.10 | chr8:2057712:+ | ZNF629^ENSG00000102870.6 | chr16:30783613:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1367:2327:27035 | . | NO_LDAS | 0.0034 | GT | 1.7232 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr8--chr16]""]" | chr8:2057712-chr16:30783613 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| MYOCD--AP000547.3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MYOCD^ENSG00000141052.18 | chr17:12752589:+ | AP000547.3^ENSG00000283633.1 | chr22:16612894:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1338:13548:24190 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.3996 | "[""INTERCHROMOSOMAL[chr17--chr22]""]" | chr17:12752589-chr22:16612894 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| MYO5B--AFG3L2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MYO5B^ENSG00000167306.20 | chr18:50194767:- | AFG3L2^ENSG00000141385.10 | chr18:12371691:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1163:26888:28941 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.7232 | "[""INTRACHROMOSOMAL[chr18:37.45Mb]""]" | chr18:50194767-chr18:12371691 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| MYO1E--C5orf51 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MYO1E^ENSG00000157483.9 | chr15:59178422:- | C5orf51^ENSG00000205765.9 | chr5:41920086:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1315:49103:21766 | . | NO_LDAS | 0.0034 | GT | 1.8295 | AG | 1.5058 | "[""INTERCHROMOSOMAL[chr15--chr5]""]" | chr15:59178422-chr5:41920086 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| MYO1B--GOLPH3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MYO1B^ENSG00000128641.19 | chr2:191245591:+ | GOLPH3^ENSG00000113384.14 | chr5:32173909:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1425:28013:1659 | . | NO_LDAS | 0.0034 | GC | 1.6402 | AG | 1.5058 | "[""INTERCHROMOSOMAL[chr2--chr5]""]" | chr2:191245591-chr5:32173909 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| MYO10--EDARADD | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MYO10^ENSG00000145555.15 | chr5:16702543:- | EDARADD^ENSG00000186197.15 | chr1:236502869:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1262:10239:3662 | . | NO_LDAS | 0.0034 | GT | 1.6402 | AG | 0.8366 | "[""INTERCHROMOSOMAL[chr5--chr1]""]" | chr5:16702543-chr1:236502869 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| MYLK--AARS2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MYLK^ENSG00000065534.19 | chr3:123700519:- | AARS2^ENSG00000124608.5 | chr6:44301266:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2432:25739:20281 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr3--chr6]""]" | chr3:123700519-chr6:44301266 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| MYB--HBS1L | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MYB^ENSG00000118513.19 | chr6:135181536:+ | HBS1L^ENSG00000112339.15 | chr6:135002842:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1225:33239:9421 | . | NO_LDAS | 0.0034 | GT | 1.5656 | AG | 1.8295 | "[""INTRACHROMOSOMAL[chr6:0.08Mb]"",""LOCAL_INVERSION:+:-:[78252]""]" | chr6:135181536-chr6:135002842 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| MXRA5--SHC3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MXRA5^ENSG00000101825.8 | chrX:3320530:- | SHC3^ENSG00000148082.10 | chr9:89037402:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2320:39314:5652 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chrX--chr9]""]" | chrX:3320530-chr9:89037402 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| MUCL1--SGCE | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MUCL1^ENSG00000172551.11 | chr12:54856877:+ | SGCE^ENSG00000127990.19 | chr7:94624237:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1101:48496:21136 | . | NO_LDAS | 0.0034 | GT | 1.6895 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr12--chr7]""]" | chr12:54856877-chr7:94624237 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| MTURN--TNS3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MTURN^ENSG00000180354.16 | chr7:30158161:+ | TNS3^ENSG00000136205.17 | chr7:47439594:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1104:23757:10711 | . | YES_LDAS | 0.0034 | GC | 1.8892 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr7:17.11Mb]""]" | chr7:30158161-chr7:47439594 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| MTND6P22--THRB | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MTND6P22^ENSG00000270230.1 | chr5:100046965:+ | THRB^ENSG00000151090.20 | chr3:24165363:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1238:23312:21542 | . | NO_LDAS | 0.0034 | GT | 1.8323 | AG | 1.5546 | "[""INTERCHROMOSOMAL[chr5--chr3]""]" | chr5:100046965-chr3:24165363 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| MTCL1--NFATC3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MTCL1^ENSG00000168502.17 | chr18:8798291:+ | NFATC3^ENSG00000072736.19 | chr16:68214329:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1318:20141:1757 | . | YES_LDAS | 0.0034 | GT | 1.4295 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr18--chr16]""]" | chr18:8798291-chr16:68214329 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| MT1X--XPO7 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | MT1X^ENSG00000187193.9 | chr16:56683230:+ | XPO7^ENSG00000130227.17 | chr8:22002130:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2166:28627:21108 | . | NO_LDAS | 0.0017 | GT | 1.9086 | AG | 1.5301 | "[""INTERCHROMOSOMAL[chr16--chr8]""]" | chr16:56683230-chr8:22002130 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| MT1DP--MT1G | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | MT1DP^ENSG00000205361.8 | chr16:56644176:+ | MT1G^ENSG00000125144.14 | chr16:56666970:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1459:7245:24765 | . | YES_LDAS | 0.0017 | GT | 1.9086 | AG | 1.5656 | "[""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr16:0.02Mb]"",""LOCAL_INVERSION:+:-:[21944]""]" | chr16:56644176-chr16:56666970 | False | 0 | Excluded | annotation | pattern: | HGNC_GENEFAM | FAIL | 1 | |||
| MST1L--LINC01902 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | MST1L^ENSG00000186715.11 | chr1:16758675:- | LINC01902^ENSG00000283503.2 | chr18:39887131:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1183:46474:6535 | . | NO_LDAS | 0.0017 | GT | 1.5546 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr1--chr18]""]" | chr1:16758675-chr18:39887131 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| MSANTD2--NCALD | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MSANTD2^ENSG00000120458.13 | chr11:124772994:- | NCALD^ENSG00000104490.18 | chr8:101687633:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1184:48456:4839 | . | NO_LDAS | 0.0034 | GT | 1.9219 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr11--chr8]""]" | chr11:124772994-chr8:101687633 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| MROH8--TNFAIP8 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MROH8^ENSG00000101353.15 | chr20:37179349:- | TNFAIP8^ENSG00000145779.8 | chr5:119392816:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2268:38311:27315 | . | NO_LDAS | 0.0034 | GC | 1.8295 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr20--chr5]""]" | chr20:37179349-chr5:119392816 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| MRAS--DONSON | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MRAS^ENSG00000158186.13 | chr3:138402565:+ | DONSON^ENSG00000159147.18 | chr21:33577704:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1318:3451:26937 | . | NO_LDAS | 0.0034 | GT | 1.5219 | AG | 0.971 | "[""INTERCHROMOSOMAL[chr3--chr21]""]" | chr3:138402565-chr21:33577704 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| MPZL1--LEF1 | 1 | 0 | 0.25 | 0.0 | INCL_NON_REF_SPLICE | MPZL1^ENSG00000197965.12 | chr1:167722026:+ | LEF1^ENSG00000138795.10 | chr4:108167748:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1166:17342:22999 | . | NO_LDAS | 0.0009 | GT | 1.5546 | AG | 1.3753 | "[""INTERCHROMOSOMAL[chr1--chr4]""]" | chr1:167722026-chr4:108167748 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| MPP7--USP16 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MPP7^ENSG00000150054.18 | chr10:28058491:- | USP16^ENSG00000156256.15 | chr21:29042777:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1415:13653:17731 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr10--chr21]""]" | chr10:28058491-chr21:29042777 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| MPP6--ALG9 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MPP6^ENSG00000105926.16 | chr7:24573593:+ | ALG9^ENSG00000086848.15 | chr11:111786520:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1128:29946:3915 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr7--chr11]""]" | chr7:24573593-chr11:111786520 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| MOV10L1--AL133380.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MOV10L1^ENSG00000073146.16 | chr22:50090059:+ | AL133380.1^ENSG00000251508.1 | chr1:233295617:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1198:1218:28926 | . | NO_LDAS | 0.0034 | GT | 1.231 | AG | 1.053 | "[""INTERCHROMOSOMAL[chr22--chr1]""]" | chr22:50090059-chr1:233295617 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| MORN1--ZNF581 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MORN1^ENSG00000116151.14 | chr1:2357432:- | ZNF581^ENSG00000171425.10 | chr19:55644553:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1393:29671:7530 | . | YES_LDAS | 0.0034 | GT | 1.5656 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr1--chr19]""]" | chr1:2357432-chr19:55644553 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| MNT--INCENP | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | MNT^ENSG00000070444.15 | chr17:2394043:- | INCENP^ENSG00000149503.13 | chr11:62146707:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1257:46992:21920 | . | NO_LDAS | 0.0017 | GT | 1.9656 | AG | 1.4566 | "[""INTERCHROMOSOMAL[chr17--chr11]""]" | chr17:2394043-chr11:62146707 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 1 | |||
| MNAT1--PIKFYVE | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MNAT1^ENSG00000020426.11 | chr14:60879835:+ | PIKFYVE^ENSG00000115020.17 | chr2:208312236:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1206:30334:7137 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.6729 | "[""INTERCHROMOSOMAL[chr14--chr2]""]" | chr14:60879835-chr2:208312236 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| MMP24OS--PDE4D | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MMP24OS^ENSG00000126005.17 | chr20:35272005:- | PDE4D^ENSG00000113448.19 | chr5:58993465:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1101:21338:27203 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr20--chr5]""]" | chr20:35272005-chr5:58993465 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| MITF--SEC61A2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MITF^ENSG00000187098.17 | chr3:69739701:+ | SEC61A2^ENSG00000065665.21 | chr10:12169258:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1230:4107:1420 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr3--chr10]""]" | chr3:69739701-chr10:12169258 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| MIR99AHG--CXADR | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MIR99AHG^ENSG00000215386.13 | chr21:16419741:+ | CXADR^ENSG00000154639.19 | chr21:17547027:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1109:42308:8987 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr21:0.87Mb]""]" | chr21:16419741-chr21:17547027 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| MIR7-3HG--LAPTM4A | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MIR7-3HG^ENSG00000176840.12 | chr19:4769376:+ | LAPTM4A^ENSG00000068697.7 | chr2:20041011:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2114:31960:13625 | . | NO_LDAS | 0.0034 | GT | 1.7968 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr19--chr2]""]" | chr19:4769376-chr2:20041011 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| MIR500A--DGCR8 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MIR500A^ENSG00000207785.1 | chrX:50008470:+ | DGCR8^ENSG00000128191.16 | chr22:20086353:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2170:9365:17759 | . | NO_LDAS | 0.0034 | GT | 1.7968 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chrX--chr22]""]" | chrX:50008470-chr22:20086353 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| MIR3681HG--CLOCK | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MIR3681HG^ENSG00000224184.6 | chr2:12314405:+ | CLOCK^ENSG00000134852.15 | chr4:55510004:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2210:4713:6731 | . | NO_LDAS | 0.0034 | GT | 1.7465 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr2--chr4]""]" | chr2:12314405-chr4:55510004 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| MIR3178--HCCS | 1 | 0 | 0.25 | 0.0 | INCL_NON_REF_SPLICE | MIR3178^ENSG00000266232.1 | chr16:2531979:- | HCCS^ENSG00000004961.15 | chrX:11111357:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1123:6121:24667 | . | NO_LDAS | 0.0009 | GT | 1.5329 | AG | 0.9183 | "[""INTERCHROMOSOMAL[chr16--chrX]""]" | chr16:2531979-chrX:11111357 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| MIPEPP3--DLG1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MIPEPP3^ENSG00000233325.3 | chr13:21301618:+ | DLG1^ENSG00000075711.21 | chr3:197282845:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1241:42194:8735 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.5628 | "[""INTERCHROMOSOMAL[chr13--chr3]""]" | chr13:21301618-chr3:197282845 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| MIPEP--TNFRSF19 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MIPEP^ENSG00000027001.10 | chr13:23836240:- | TNFRSF19^ENSG00000127863.16 | chr13:23667980:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1147:48642:29151 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.5058 | "[""TumorFusionsNAR2018"",""INTRACHROMOSOMAL[chr13:0.05Mb]"",""LOCAL_INVERSION:-:+:[54085]""]" | chr13:23836240-chr13:23667980 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| MINDY4--AHR | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MINDY4^ENSG00000106125.14 | chr7:30791574:+ | AHR^ENSG00000106546.14 | chr7:17309936:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1205:49920:7768 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.8323 | "[""INTRACHROMOSOMAL[chr7:13.43Mb]""]" | chr7:30791574-chr7:17309936 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| MIER2--DAB1 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | MIER2^ENSG00000105556.11 | chr19:340514:- | DAB1^ENSG00000173406.16 | chr1:58506209:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2360:30626:10332 | . | NO_LDAS | 0.0017 | GT | 1.7819 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr19--chr1]""]" | chr19:340514-chr1:58506209 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| MIA3--MYSM1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MIA3^ENSG00000154305.18 | chr1:222645685:+ | MYSM1^ENSG00000162601.11 | chr1:58685251:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1429:24137:21794 | . | YES_LDAS | 0.0034 | GT | 1.9219 | AG | 1.9899 | "[""INTRACHROMOSOMAL[chr1:163.92Mb]""]" | chr1:222645685-chr1:58685251 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| MFSD14B--PRELP | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MFSD14B^ENSG00000148110.16 | chr9:94438528:+ | PRELP^ENSG00000188783.6 | chr1:203489677:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2326:25076:4531 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr9--chr1]""]" | chr9:94438528-chr1:203489677 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| MFSD14A--FRRS1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MFSD14A^ENSG00000156875.14 | chr1:100038316:+ | FRRS1^ENSG00000156869.14 | chr1:99715672:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2372:14656:23868 | . | NO_LDAS | 0.0034 | GT | 1.5058 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr1:0.27Mb]""]" | chr1:100038316-chr1:99715672 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| MFN2--GID4 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MFN2^ENSG00000116688.18 | chr1:11992690:+ | GID4^ENSG00000141034.10 | chr17:18066731:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1342:6954:18768 | . | NO_LDAS | 0.0034 | GT | 1.5058 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr1--chr17]""]" | chr1:11992690-chr17:18066731 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| METTL21A--PLEKHM3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | METTL21A^ENSG00000144401.14 | chr2:207621806:- | PLEKHM3^ENSG00000178385.15 | chr2:207977586:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1126:36976:13597 | . | YES_LDAS | 0.0034 | GT | 1.5656 | AG | 1.6402 | "[""TumorFusionsNAR2018"",""ChimerSeq"",""INTRACHROMOSOMAL[chr2:0.20Mb]""]" | chr2:207621806-chr2:207977586 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| METAP2--FGD5P1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | METAP2^ENSG00000111142.14 | chr12:95476178:+ | FGD5P1^ENSG00000275340.1 | chr3:13935453:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1481:7974:11733 | . | NO_LDAS | 0.0034 | GT | 1.5058 | AG | 1.5546 | "[""INTERCHROMOSOMAL[chr12--chr3]""]" | chr12:95476178-chr3:13935453 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| MEPCE--TUBGCP6 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MEPCE^ENSG00000146834.14 | chr7:100428890:+ | TUBGCP6^ENSG00000128159.12 | chr22:50222554:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1322:11048:21234 | . | NO_LDAS | 0.0034 | GT | 1.4716 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr7--chr22]""]" | chr7:100428890-chr22:50222554 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| MEIS2--PBRM1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MEIS2^ENSG00000134138.20 | chr15:37083771:- | PBRM1^ENSG00000163939.18 | chr3:52668645:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1117:16533:6185 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr15--chr3]""]" | chr15:37083771-chr3:52668645 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| MED6--TRAPPC6B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MED6^ENSG00000133997.12 | chr14:70593296:- | TRAPPC6B^ENSG00000182400.15 | chr14:39159550:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2296:20990:2892 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8323 | "[""INTRACHROMOSOMAL[chr14:31.41Mb]""]" | chr14:70593296-chr14:39159550 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| MED20--USP49 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MED20^ENSG00000124641.16 | chr6:41907016:- | USP49^ENSG00000164663.14 | chr6:41871637:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2422:41733:28926 | . | YES_LDAS | 0.0034 | GT | 1.5656 | AG | 1.4295 | "[""Babiceanu_Normal"",""INTRACHROMOSOMAL[chr6:0.01Mb]"",""NEIGHBORS[9993]""]" | chr6:41907016-chr6:41871637 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | ||||
| MED20--USP49 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MED20^ENSG00000124641.16 | chr6:41906776:- | USP49^ENSG00000164663.14 | chr6:41871637:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1106:6275:4531 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.4295 | "[""Babiceanu_Normal"",""INTRACHROMOSOMAL[chr6:0.01Mb]"",""NEIGHBORS[9993]""]" | chr6:41906776-chr6:41871637 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | ||||
| MED14--HDAC8 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MED14^ENSG00000180182.11 | chrX:40726746:- | HDAC8^ENSG00000147099.21 | chrX:72351838:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1379:49006:14031 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.7465 | "[""INTRACHROMOSOMAL[chrX:31.59Mb]""]" | chrX:40726746-chrX:72351838 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| MED13--ZFAND6 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MED13^ENSG00000108510.10 | chr17:62063067:- | ZFAND6^ENSG00000086666.19 | chr15:80120328:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1165:39921:25451 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr17--chr15]""]" | chr17:62063067-chr15:80120328 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| ME3--AL359764.2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ME3^ENSG00000151376.18 | chr11:86671762:- | AL359764.2^ENSG00000287516.1 | chr1:241430227:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2278:42486:9463 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr11--chr1]""]" | chr11:86671762-chr1:241430227 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| MDS2--PLEKHM3 | 1 | 0 | 0.17 | 0.0 | ONLY_REF_SPLICE | MDS2^ENSG00000197880.9 | chr1:23628597:+ | PLEKHM3^ENSG00000178385.15 | chr2:207908577:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1285:16654:7095 | . | NO_LDAS | 0.0006 | GT | 1.8892 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr1--chr2]""]" | chr1:23628597-chr2:207908577 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| MDGA1--AL110114.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MDGA1^ENSG00000112139.17 | chr6:37632334:- | AL110114.1^ENSG00000286787.1 | chr20:1037980:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1147:9163:16456 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr6--chr20]""]" | chr6:37632334-chr20:1037980 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| MCFD2--DMWD | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | MCFD2^ENSG00000180398.13 | chr2:46909019:- | DMWD^ENSG00000185800.12 | chr19:45789309:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1422:20845:25311 | . | NO_LDAS | 0.0017 | GT | 1.7819 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chr2--chr19]""]" | chr2:46909019-chr19:45789309 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| MCC--TCF12 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MCC^ENSG00000171444.18 | chr5:113294329:- | TCF12^ENSG00000140262.18 | chr15:57091789:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1390:29202:6549 | . | NO_LDAS | 0.0034 | GT | 1.8295 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr5--chr15]""]" | chr5:113294329-chr15:57091789 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| MAU2--SUGP1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MAU2^ENSG00000129933.21 | chr19:19354445:+ | SUGP1^ENSG00000105705.16 | chr19:19276674:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1241:48747:15909 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr19:0.00Mb]"",""LOCAL_INVERSION:+:-:[320]""]" | chr19:19354445-chr19:19276674 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| MATR3--EXOC6B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MATR3^ENSG00000015479.20 | chr5:139293772:+ | EXOC6B^ENSG00000144036.16 | chr2:72741469:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1425:14340:20715 | . | YES_LDAS | 0.0034 | GT | 1.8295 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr5--chr2]""]" | chr5:139293772-chr2:72741469 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| MAST4--FNIP1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MAST4^ENSG00000069020.18 | chr5:66899982:+ | FNIP1^ENSG00000217128.12 | chr5:131677872:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1223:28538:3298 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8323 | "[""INTRACHROMOSOMAL[chr5:64.47Mb]""]" | chr5:66899982-chr5:131677872 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| MAST4--EPN1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MAST4^ENSG00000069020.18 | chr5:67165448:+ | EPN1^ENSG00000063245.15 | chr19:55695148:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1439:30529:13415 | . | NO_LDAS | 0.0034 | GT | 1.8256 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr5--chr19]""]" | chr5:67165448-chr19:55695148 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| MASP1--PTK7 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | MASP1^ENSG00000127241.18 | chr3:187253240:- | PTK7^ENSG00000112655.16 | chr6:43132042:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1147:26880:17689 | . | NO_LDAS | 0.0011 | GT | 1.5058 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr3--chr6]""]" | chr3:187253240-chr6:43132042 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| MARF1--AC003973.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MARF1^ENSG00000166783.22 | chr16:15635656:- | AC003973.1^ENSG00000269504.3 | chr19:22022244:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2117:29234:21290 | . | NO_LDAS | 0.0034 | GT | 1.9219 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr16--chr19]""]" | chr16:15635656-chr19:22022244 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| MAPK8--ARHGAP22 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MAPK8^ENSG00000107643.16 | chr10:48325933:+ | ARHGAP22^ENSG00000128805.15 | chr10:48479764:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1119:8742:25536 | . | NO_LDAS | 0.0034 | GT | 1.6402 | AG | 1.5546 | "[""INTRACHROMOSOMAL[chr10:0.01Mb]"",""LOCAL_INVERSION:+:-:[6676]""]" | chr10:48325933-chr10:48479764 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| MAPK3--SHISAL1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MAPK3^ENSG00000102882.12 | chr16:30116636:- | SHISAL1^ENSG00000138944.8 | chr22:44247036:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1159:46943:5806 | . | YES_LDAS | 0.0034 | GT | 1.7056 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr16--chr22]""]" | chr16:30116636-chr22:44247036 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| MAP4K2--SOX13 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MAP4K2^ENSG00000168067.12 | chr11:64788067:- | SOX13^ENSG00000143842.15 | chr1:204114563:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1382:32769:8132 | . | NO_LDAS | 0.0034 | GT | 1.8295 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr11--chr1]""]" | chr11:64788067-chr1:204114563 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| MAP3K9--APBB1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MAP3K9^ENSG00000006432.16 | chr14:70809046:- | APBB1^ENSG00000166313.19 | chr11:6410879:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1357:1607:5806 | . | NO_LDAS | 0.0034 | GT | 1.1589 | AG | 1.3383 | "[""INTERCHROMOSOMAL[chr14--chr11]""]" | chr14:70809046-chr11:6410879 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| MAP3K6--AC087239.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MAP3K6^ENSG00000142733.17 | chr1:27355409:- | AC087239.1^ENSG00000278743.1 | chr12:25385932:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1324:44872:10010 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.2419 | "[""INTERCHROMOSOMAL[chr1--chr12]""]" | chr1:27355409-chr12:25385932 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| MAP2K4--STX8 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MAP2K4^ENSG00000065559.15 | chr17:12021001:+ | STX8^ENSG00000170310.15 | chr17:9505162:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1222:21864:11803 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr17:2.44Mb]""]" | chr17:12021001-chr17:9505162 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| MAN2B2--ZNF302 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MAN2B2^ENSG00000013288.9 | chr4:6589160:+ | ZNF302^ENSG00000089335.21 | chr19:34685096:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1391:29978:8511 | . | NO_LDAS | 0.0034 | GT | 1.7465 | AG | 1.5301 | "[""INTERCHROMOSOMAL[chr4--chr19]""]" | chr4:6589160-chr19:34685096 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| MAN2B1--IFNLR1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MAN2B1^ENSG00000104774.13 | chr19:12649906:- | IFNLR1^ENSG00000185436.12 | chr1:24156276:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1228:49888:17941 | . | NO_LDAS | 0.0034 | GT | 1.053 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr19--chr1]""]" | chr19:12649906-chr1:24156276 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| MAN2A2--SH3PXD2A | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MAN2A2^ENSG00000196547.15 | chr15:90916256:+ | SH3PXD2A^ENSG00000107957.16 | chr10:103661114:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1231:16193:13555 | . | YES_LDAS | 0.0034 | GT | 1.8295 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr15--chr10]""]" | chr15:90916256-chr10:103661114 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| MAML2--SBF2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MAML2^ENSG00000184384.14 | chr11:96341383:- | SBF2^ENSG00000133812.17 | chr11:10193987:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1133:51943:28030 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8323 | "[""INTRACHROMOSOMAL[chr11:85.68Mb]""]" | chr11:96341383-chr11:10193987 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| MAMDC2--THAP9-AS1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MAMDC2^ENSG00000165072.10 | chr9:70170627:+ | THAP9-AS1^ENSG00000251022.6 | chr4:82894847:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1185:40156:26586 | . | YES_LDAS | 0.0034 | GT | 1.9899 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr9--chr4]""]" | chr9:70170627-chr4:82894847 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| MAGI3--ADAMTS15 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MAGI3^ENSG00000081026.19 | chr1:113590658:+ | ADAMTS15^ENSG00000166106.3 | chr11:130476074:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1222:51579:21710 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr1--chr11]""]" | chr1:113590658-chr11:130476074 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| MACROH2A2--KDM2A | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MACROH2A2^ENSG00000099284.15 | chr10:70065189:+ | KDM2A^ENSG00000173120.15 | chr11:67180079:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1288:3920:14970 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr10--chr11]""]" | chr10:70065189-chr11:67180079 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| LZTS2--AACS | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LZTS2^ENSG00000107816.17 | chr10:100999902:+ | AACS^ENSG00000081760.17 | chr12:125065594:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1233:10611:24204 | . | NO_LDAS | 0.0034 | GT | 1.2867 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr10--chr12]""]" | chr10:100999902-chr12:125065594 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| LYST--EXOC2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LYST^ENSG00000143669.14 | chr1:235830226:- | EXOC2^ENSG00000112685.14 | chr6:532610:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1405:25893:29179 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr1--chr6]""]" | chr1:235830226-chr6:532610 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| LYRM4--ZFAND3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LYRM4^ENSG00000214113.11 | chr6:5216618:- | ZFAND3^ENSG00000156639.12 | chr6:37929959:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1106:8483:4853 | . | YES_LDAS | 0.0034 | GT | 1.9899 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr6:32.56Mb]""]" | chr6:5216618-chr6:37929959 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| LYPLA1--ATP6V1H | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LYPLA1^ENSG00000120992.18 | chr8:54100908:- | ATP6V1H^ENSG00000047249.18 | chr8:53772167:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1147:40301:11677 | . | YES_LDAS | 0.0034 | GT | 1.8062 | AG | 1.5329 | "[""INTRACHROMOSOMAL[chr8:0.20Mb]""]" | chr8:54100908-chr8:53772167 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| LSM8--CDC42P6 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LSM8^ENSG00000128534.8 | chr7:118185408:+ | CDC42P6^ENSG00000237350.1 | chr4:22728000:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1319:17981:10570 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr7--chr4]""]" | chr7:118185408-chr4:22728000 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| LRRC69--OTUD6B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LRRC69^ENSG00000214954.8 | chr8:91200792:+ | OTUD6B^ENSG00000155100.11 | chr8:91078356:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1464:1316:4013 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.6402 | "[""DEEPEST2019"",""INTRACHROMOSOMAL[chr8:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[14737]""]" | chr8:91200792-chr8:91078356 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| LRRC59--FHIT | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LRRC59^ENSG00000108829.10 | chr17:50385189:- | FHIT^ENSG00000189283.10 | chr3:61042055:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1292:23231:4727 | . | NO_LDAS | 0.0034 | GT | 1.5058 | AG | 1.1589 | "[""INTERCHROMOSOMAL[chr17--chr3]""]" | chr17:50385189-chr3:61042055 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| LRRC40--AC000068.1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LRRC40^ENSG00000066557.6 | chr1:70205390:- | AC000068.1^ENSG00000185065.6 | chr22:19448442:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2431:18968:10094 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr1--chr22]""]" | chr1:70205390-chr22:19448442 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| LRRC37A4P--PLEKHM1 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | LRRC37A4P^ENSG00000214425.8 | chr17:45508485:- | PLEKHM1^ENSG00000225190.11 | chr17:45482525:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1266:15910:26236 | . | YES_LDAS | 0.0017 | GT | 1.6895 | AG | 1.7968 | "[""INTRACHROMOSOMAL[chr17:0.02Mb]"",""NEIGHBORS[15992]""]" | chr17:45508485-chr17:45482525 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| LRRC1--CNTNAP3 | 1 | 0 | 0.33 | 0.0 | ONLY_REF_SPLICE | LRRC1^ENSG00000137269.15 | chr6:53899891:+ | CNTNAP3^ENSG00000106714.17 | chr9:39078920:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1122:48383:14998 | . | NO_LDAS | 0.0011 | GT | 1.9086 | AG | 1.5329 | "[""INTERCHROMOSOMAL[chr6--chr9]""]" | chr6:53899891-chr9:39078920 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| LRPPRC--TET3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LRPPRC^ENSG00000138095.19 | chr2:43995799:- | TET3^ENSG00000187605.16 | chr2:74080498:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1146:12852:4629 | . | YES_LDAS | 0.0034 | GT | 1.2729 | AG | 1.3996 | "[""INTRACHROMOSOMAL[chr2:29.99Mb]""]" | chr2:43995799-chr2:74080498 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| LRPAP1--EIF4B | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LRPAP1^ENSG00000163956.13 | chr4:3517703:- | EIF4B^ENSG00000063046.18 | chr12:53038393:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1189:16703:25536 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.4295 | "[""INTERCHROMOSOMAL[chr4--chr12]""]" | chr4:3517703-chr12:53038393 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| LRP8--WDR1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LRP8^ENSG00000157193.18 | chr1:53245477:- | WDR1^ENSG00000071127.17 | chr4:10097891:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1464:11161:12294 | . | NO_LDAS | 0.0034 | GT | 0.971 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr1--chr4]""]" | chr1:53245477-chr4:10097891 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| LRP10--MTCYBP43 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LRP10^ENSG00000197324.9 | chr14:22872337:+ | MTCYBP43^ENSG00000250624.1 | chr4:30884711:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1270:10004:1434 | . | NO_LDAS | 0.0034 | GT | 1.2729 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr14--chr4]""]" | chr14:22872337-chr4:30884711 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| LPCAT1--COBL | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | LPCAT1^ENSG00000153395.10 | chr5:1467268:- | COBL^ENSG00000106078.19 | chr7:51026658:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1118:32624:5806 | . | NO_LDAS | 0.0011 | GT | 1.4566 | AG | 1.5656 | "[""INTERCHROMOSOMAL[chr5--chr7]""]" | chr5:1467268-chr7:51026658 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| LOXL4--ACAD8 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LOXL4^ENSG00000138131.4 | chr10:98252408:- | ACAD8^ENSG00000151498.12 | chr11:134259608:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1187:26055:24639 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr10--chr11]""]" | chr10:98252408-chr11:134259608 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| LMOD2--ABCA3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LMOD2^ENSG00000170807.12 | chr7:123661986:+ | ABCA3^ENSG00000167972.14 | chr16:2300092:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1117:28126:22565 | . | NO_LDAS | 0.0034 | GT | 1.2729 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr7--chr16]""]" | chr7:123661986-chr16:2300092 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| LMO7--RIF1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LMO7^ENSG00000136153.20 | chr13:75858103:+ | RIF1^ENSG00000080345.18 | chr2:151463494:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2181:10312:10598 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr13--chr2]""]" | chr13:75858103-chr2:151463494 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| LMNB2--TPD52L2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LMNB2^ENSG00000176619.13 | chr19:2438163:- | TPD52L2^ENSG00000101150.18 | chr20:63891452:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1416:22657:12981 | . | NO_LDAS | 0.0034 | GT | 1.7465 | AG | 1.2729 | "[""INTERCHROMOSOMAL[chr19--chr20]""]" | chr19:2438163-chr20:63891452 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| LMAN2--ZNF346 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LMAN2^ENSG00000169223.15 | chr5:177334284:- | ZNF346^ENSG00000113761.12 | chr5:177062058:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1377:30820:19861 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr5:0.25Mb]""]" | chr5:177334284-chr5:177062058 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| LINC02802--AC245060.4 | 1 | 0 | 0.33 | 0.0 | ONLY_REF_SPLICE | LINC02802^ENSG00000232527.8 | chr1:144250225:- | AC245060.4^ENSG00000272779.1 | chr22:22303224:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2177:48254:7908 | . | YES_LDAS | 0.0011 | GT | 1.9329 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr1--chr22]""]" | chr1:144250225-chr22:22303224 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| LINC02709--LAMA4 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | LINC02709^ENSG00000245522.2 | chr11:9756187:- | LAMA4^ENSG00000112769.20 | chr6:112148259:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2101:32591:15363 | . | NO_LDAS | 0.0011 | GT | 1.8295 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr11--chr6]""]" | chr11:9756187-chr6:112148259 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| LINC02651--AC004951.2 | 1 | 0 | 0.33 | 0.0 | ONLY_REF_SPLICE | LINC02651^ENSG00000235645.2 | chr10:69691145:+ | AC004951.2^ENSG00000239556.4 | chr7:43988247:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2220:37146:6465 | . | NO_LDAS | 0.0011 | GT | 1.9086 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr10--chr7]""]" | chr10:69691145-chr7:43988247 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| LINC02506--SCNM1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LINC02506^ENSG00000251129.2 | chr4:32155406:+ | SCNM1^ENSG00000163156.12 | chr1:151166471:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1342:45260:27301 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.5628 | "[""INTERCHROMOSOMAL[chr4--chr1]""]" | chr4:32155406-chr1:151166471 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | ||||
| LINC02475--ACTN4P1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LINC02475^ENSG00000251350.2 | chr4:44020113:+ | ACTN4P1^ENSG00000213493.3 | chr4:116598857:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1401:17568:5400 | . | NO_LDAS | 0.0034 | GT | 1.6895 | AG | 1.7968 | "[""INTRACHROMOSOMAL[chr4:72.58Mb]""]" | chr4:44020113-chr4:116598857 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| LINC02370--IRAG1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LINC02370^ENSG00000230294.4 | chr12:131347531:+ | IRAG1^ENSG00000072952.19 | chr11:10606772:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1236:27721:3116 | . | NO_LDAS | 0.0034 | GC | 1.9656 | AG | 1.5546 | "[""INTERCHROMOSOMAL[chr12--chr11]""]" | chr12:131347531-chr11:10606772 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| LINC01620--KDM6A | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LINC01620^ENSG00000168746.8 | chr20:44452023:- | KDM6A^ENSG00000147050.16 | chrX:45034931:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2344:5498:24513 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr20--chrX]""]" | chr20:44452023-chrX:45034931 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| LINC01591--DHX34 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LINC01591^ENSG00000254083.6 | chr8:135234535:+ | DHX34^ENSG00000134815.19 | chr19:47381980:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2415:8419:26180 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr8--chr19]""]" | chr8:135234535-chr19:47381980 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| LINC01570--PYGB | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LINC01570^ENSG00000260338.2 | chr16:5616243:- | PYGB^ENSG00000100994.12 | chr20:25276646:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1138:7496:17072 | . | NO_LDAS | 0.0034 | GT | 1.371 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr16--chr20]""]" | chr16:5616243-chr20:25276646 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| LINC01502--ZIC1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | LINC01502^ENSG00000237339.5 | chr9:135586774:+ | ZIC1^ENSG00000152977.10 | chr3:147410068:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1235:7771:10094 | . | NO_LDAS | 0.0017 | GT | 1.4256 | AG | 0.6998 | "[""INTERCHROMOSOMAL[chr9--chr3]""]" | chr9:135586774-chr3:147410068 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| LINC01502--CHN2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LINC01502^ENSG00000237339.5 | chr9:135586774:+ | CHN2^ENSG00000106069.23 | chr7:29398060:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1151:47995:10654 | . | NO_LDAS | 0.0034 | GT | 1.4256 | AG | 0.3534 | "[""INTERCHROMOSOMAL[chr9--chr7]""]" | chr9:135586774-chr7:29398060 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| LINC01446--MFSD12 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LINC01446^ENSG00000205628.4 | chr7:53811629:- | MFSD12^ENSG00000161091.13 | chr19:3546088:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2144:41555:13961 | . | NO_LDAS | 0.0034 | GT | 1.9219 | AG | 1.5546 | "[""INTERCHROMOSOMAL[chr7--chr19]""]" | chr7:53811629-chr19:3546088 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| LINC01342--NR1D2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LINC01342^ENSG00000223823.1 | chr1:1140968:+ | NR1D2^ENSG00000174738.13 | chr3:23945513:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1242:48472:10528 | . | NO_LDAS | 0.0034 | GT | 1.5329 | AG | 0.9183 | "[""INTERCHROMOSOMAL[chr1--chr3]""]" | chr1:1140968-chr3:23945513 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 1 | |||
| LINC01278--CLEC16A | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LINC01278^ENSG00000235437.8 | chrX:63560825:- | CLEC16A^ENSG00000038532.16 | chr16:10977225:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2285:19364:22747 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chrX--chr16]""]" | chrX:63560825-chr16:10977225 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| LINC01252--PAN3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LINC01252^ENSG00000247157.7 | chr12:11549721:+ | PAN3^ENSG00000152520.14 | chr13:28256292:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1426:24882:2569 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr12--chr13]""]" | chr12:11549721-chr13:28256292 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| LINC01191--MEAK7 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LINC01191^ENSG00000234199.3 | chr2:114000406:+ | MEAK7^ENSG00000140950.16 | chr16:84489363:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2459:38004:7193 | . | NO_LDAS | 0.0034 | GT | 1.8256 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr2--chr16]""]" | chr2:114000406-chr16:84489363 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| LINC01176--GOLGA8H | 1 | 0 | 0.09 | 0.0 | INCL_NON_REF_SPLICE | LINC01176^ENSG00000281404.2 | chr7:30403885:+ | GOLGA8H^ENSG00000261794.1 | chr15:30614146:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1232:16929:3032 | . | NO_LDAS | 0.0003 | GT | 1.5628 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr7--chr15]""]" | chr7:30403885-chr15:30614146 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| LINC01138--PLEKHM3 | 1 | 0 | 0.17 | 0.0 | ONLY_REF_SPLICE | LINC01138^ENSG00000274020.4 | chr1:148343862:- | PLEKHM3^ENSG00000178385.15 | chr2:207908577:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1285:16654:7095 | . | NO_LDAS | 0.0006 | GT | 1.8892 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr1--chr2]""]" | chr1:148343862-chr2:207908577 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| LINC01122--C16orf70 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LINC01122^ENSG00000233723.9 | chr2:58461849:+ | C16orf70^ENSG00000125149.12 | chr16:67144182:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2375:34946:12602 | . | NO_LDAS | 0.0034 | GT | 1.6729 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr2--chr16]""]" | chr2:58461849-chr16:67144182 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| LINC01033--SHTN1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LINC01033^ENSG00000249069.8 | chr5:54390933:+ | SHTN1^ENSG00000187164.20 | chr10:116921516:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1221:38885:24274 | . | YES_LDAS | 0.0034 | GT | 1.9899 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr5--chr10]""]" | chr5:54390933-chr10:116921516 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| LINC01019--RBMS3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LINC01019^ENSG00000248118.2 | chr5:3531753:- | RBMS3^ENSG00000144642.22 | chr3:29868858:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1417:50535:2191 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr5--chr3]""]" | chr5:3531753-chr3:29868858 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| LINC00888--PSME3 | 1 | 0 | 0.25 | 0.0 | INCL_NON_REF_SPLICE | LINC00888^ENSG00000240024.5 | chr3:183447815:+ | PSME3^ENSG00000131467.11 | chr17:42833488:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1411:41871:27455 | . | NO_LDAS | 0.0009 | GT | 0.9056 | AG | 1.3383 | "[""INTERCHROMOSOMAL[chr3--chr17]""]" | chr3:183447815-chr17:42833488 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| LINC00888--DDI2 | 1 | 0 | 0.25 | 0.0 | INCL_NON_REF_SPLICE | LINC00888^ENSG00000240024.5 | chr3:183447815:+ | DDI2^ENSG00000197312.12 | chr1:15617537:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1411:41871:27455 | . | NO_LDAS | 0.0009 | GT | 0.9056 | AG | 1.3383 | "[""INTERCHROMOSOMAL[chr3--chr1]""]" | chr3:183447815-chr1:15617537 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| LINC00888--DCUN1D4 | 1 | 0 | 0.25 | 0.0 | INCL_NON_REF_SPLICE | LINC00888^ENSG00000240024.5 | chr3:183447815:+ | DCUN1D4^ENSG00000109184.15 | chr4:51843659:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1411:41871:27455 | . | NO_LDAS | 0.0009 | GT | 0.9056 | AG | 1.3383 | "[""INTERCHROMOSOMAL[chr3--chr4]""]" | chr3:183447815-chr4:51843659 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| LINC00703--PCNX2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LINC00703^ENSG00000224382.2 | chr10:4409967:+ | PCNX2^ENSG00000135749.19 | chr1:233198958:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1297:26079:25662 | . | NO_LDAS | 0.0034 | GT | 1.231 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr10--chr1]""]" | chr10:4409967-chr1:233198958 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| LINC00494--C3 | 1 | 0 | 0.2 | 0.0 | INCL_NON_REF_SPLICE | LINC00494^ENSG00000235621.9 | chr20:48359898:+ | C3^ENSG00000125730.17 | chr19:6719287:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2274:13863:26362 | . | NO_LDAS | 0.0007 | GT | 1.6729 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr20--chr19]""]" | chr20:48359898-chr19:6719287 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| LINC00411--MBTPS1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LINC00411^ENSG00000229599.2 | chr13:100938891:- | MBTPS1^ENSG00000140943.17 | chr16:84056135:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2427:23644:22060 | . | NO_LDAS | 0.0034 | GT | 1.8062 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr13--chr16]""]" | chr13:100938891-chr16:84056135 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| LIN7C--BRD9 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LIN7C^ENSG00000148943.12 | chr11:27499359:- | BRD9^ENSG00000028310.18 | chr5:879889:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1133:51878:1182 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.585 | "[""INTERCHROMOSOMAL[chr11--chr5]""]" | chr11:27499359-chr5:879889 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| LIMK2--RPS6KB1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LIMK2^ENSG00000182541.18 | chr22:31278386:+ | RPS6KB1^ENSG00000108443.14 | chr17:59910596:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2203:38513:8244 | . | NO_LDAS | 0.0034 | GT | 1.7968 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr22--chr17]""]" | chr22:31278386-chr17:59910596 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| LIMK2--FSCN3 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | LIMK2^ENSG00000182541.18 | chr22:31278353:+ | FSCN3^ENSG00000106328.10 | chr7:127601971:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1217:49572:7306 | . | NO_LDAS | 0.0011 | GC | 1.8892 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr22--chr7]""]" | chr22:31278353-chr7:127601971 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| LGI3--AC114774.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LGI3^ENSG00000168481.9 | chr8:22151831:- | AC114774.1^ENSG00000251501.1 | chr4:43587209:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1496:31232:8525 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr8--chr4]""]" | chr8:22151831-chr4:43587209 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| LFNG--TTYH3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LFNG^ENSG00000106003.13 | chr7:2520293:+ | TTYH3^ENSG00000136295.15 | chr7:2661668:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1229:21168:15643 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr7:0.10Mb]""]" | chr7:2520293-chr7:2661668 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | ||||
| LEPROTL1--PIBF1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LEPROTL1^ENSG00000104660.19 | chr8:30104991:+ | PIBF1^ENSG00000083535.16 | chr13:72792447:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1405:25658:21542 | . | NO_LDAS | 0.0034 | GC | 1.8892 | AG | 1.5656 | "[""INTERCHROMOSOMAL[chr8--chr13]""]" | chr8:30104991-chr13:72792447 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| LDHA--PAIP2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LDHA^ENSG00000134333.14 | chr11:18403010:+ | PAIP2^ENSG00000120727.13 | chr5:139369430:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2294:9770:26474 | . | NO_LDAS | 0.0034 | GT | 1.9219 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr11--chr5]""]" | chr11:18403010-chr5:139369430 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| LAMA3--STAM2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LAMA3^ENSG00000053747.17 | chr18:23751092:+ | STAM2^ENSG00000115145.10 | chr2:152175692:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1486:30901:21850 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr18--chr2]""]" | chr18:23751092-chr2:152175692 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| KY--MGARP | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | KY^ENSG00000174611.12 | chr3:134620749:- | MGARP^ENSG00000137463.5 | chr4:139266387:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1404:31815:8609 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr3--chr4]""]" | chr3:134620749-chr4:139266387 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| KTN1-AS1--HPGD | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | KTN1-AS1^ENSG00000186615.11 | chr14:55579198:- | HPGD^ENSG00000164120.14 | chr4:174522554:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2459:35747:21360 | . | NO_LDAS | 0.0034 | GT | 1.9899 | AG | 1.2729 | "[""INTERCHROMOSOMAL[chr14--chr4]""]" | chr14:55579198-chr4:174522554 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| KRT8P28--KRT3 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | KRT8P28^ENSG00000223810.2 | chr1:151950570:- | KRT3^ENSG00000186442.7 | chr12:52795457:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1479:5385:24036 | . | YES_LDAS | 0.0011 | GT | 1.9086 | AG | 1.5301 | "[""INTERCHROMOSOMAL[chr1--chr12]""]" | chr1:151950570-chr12:52795457 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| KRT8P11--INSM2 | 1 | 0 | 0.17 | 0.0 | INCL_NON_REF_SPLICE | KRT8P11^ENSG00000255815.3 | chr9:99306539:+ | INSM2^ENSG00000168348.4 | chr14:35534719:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1187:29897:23111 | . | NO_LDAS | 0.0006 | GT | 1.7465 | AG | 1.3383 | "[""INTERCHROMOSOMAL[chr9--chr14]""]" | chr9:99306539-chr14:35534719 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| KRT87P--PAIP2B | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | KRT87P^ENSG00000135477.11 | chr12:52258825:- | PAIP2B^ENSG00000124374.9 | chr2:71190012:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1192:20262:22621 | . | NO_LDAS | 0.0034 | GT | 1.5546 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr12--chr2]""]" | chr12:52258825-chr2:71190012 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| KRT6B--KRT78 | 1 | 0 | 0.25 | 0.0 | ONLY_REF_SPLICE | KRT6B^ENSG00000185479.6 | chr12:52451539:- | KRT78^ENSG00000170423.13 | chr12:52848121:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2226:51805:22271 | . | YES_LDAS | 0.0009 | GT | 1.9329 | AG | 1.7465 | "[""DGD_PARALOGS"",""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr12:0.39Mb]""]" | chr12:52451539-chr12:52848121 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | ||||
| KRT6A--KRT87P | 1 | 0 | 0.33 | 0.0 | ONLY_REF_SPLICE | KRT6A^ENSG00000205420.11 | chr12:52491112:- | KRT87P^ENSG00000135477.11 | chr12:52254364:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1424:45487:9365 | . | NO_LDAS | 0.0011 | GT | 1.9086 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr12:0.23Mb]""]" | chr12:52491112-chr12:52254364 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| KPNA3--F13B | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | KPNA3^ENSG00000102753.10 | chr13:49746949:- | F13B^ENSG00000143278.5 | chr1:197039384:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2394:24590:10220 | . | NO_LDAS | 0.0034 | GT | 1.7968 | AG | 1.5546 | "[""INTERCHROMOSOMAL[chr13--chr1]""]" | chr13:49746949-chr1:197039384 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| KLHL18--VPS13C | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | KLHL18^ENSG00000114648.12 | chr3:47283094:+ | VPS13C^ENSG00000129003.19 | chr15:61978749:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2252:34153:10556 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr3--chr15]""]" | chr3:47283094-chr15:61978749 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| KLHDC7B--MMP24OS | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | KLHDC7B^ENSG00000130487.9 | chr22:50547851:+ | MMP24OS^ENSG00000126005.17 | chr20:35277869:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1164:45091:8342 | . | NO_LDAS | 0.0017 | GT | 1.5546 | AG | 1.4256 | "[""INTERCHROMOSOMAL[chr22--chr20]""]" | chr22:50547851-chr20:35277869 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| KLF6--IPMK | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | KLF6^ENSG00000067082.15 | chr10:3784913:- | IPMK^ENSG00000151151.6 | chr10:58237814:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1344:40366:6381 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr10:54.41Mb]""]" | chr10:3784913-chr10:58237814 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| KIFC3--LINC00266-1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | KIFC3^ENSG00000140859.16 | chr16:57761164:- | LINC00266-1^ENSG00000149656.8 | chr20:64290283:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1244:6121:14690 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.6729 | "[""INTERCHROMOSOMAL[chr16--chr20]""]" | chr16:57761164-chr20:64290283 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| KIFC2--AP005229.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | KIFC2^ENSG00000167702.13 | chr8:144472484:+ | AP005229.1^ENSG00000267051.1 | chr18:11367178:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2222:7359:1813 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr8--chr18]""]" | chr8:144472484-chr18:11367178 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| KIFBP--PLEKHM3 | 1 | 0 | 0.17 | 0.0 | ONLY_REF_SPLICE | KIFBP^ENSG00000198954.9 | chr10:68995278:+ | PLEKHM3^ENSG00000178385.15 | chr2:207908577:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1285:16654:7095 | . | NO_LDAS | 0.0006 | GT | 1.8892 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr10--chr2]""]" | chr10:68995278-chr2:207908577 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| KIF7--TRAFD1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | KIF7^ENSG00000166813.16 | chr15:89646910:- | TRAFD1^ENSG00000135148.12 | chr12:112152838:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1231:47833:5134 | . | NO_LDAS | 0.0017 | GT | 1.5628 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr15--chr12]""]" | chr15:89646910-chr12:112152838 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| KIF5B--H3C14 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | KIF5B^ENSG00000170759.11 | chr10:32034690:- | H3C14^ENSG00000203811.1 | chr1:149840420:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1391:33061:6591 | . | NO_LDAS | 0.0017 | GT | 1.9086 | AG | 1.6729 | "[""INTERCHROMOSOMAL[chr10--chr1]""]" | chr10:32034690-chr1:149840420 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| KIF4A--DBNL | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | KIF4A^ENSG00000090889.12 | chrX:70420544:+ | DBNL^ENSG00000136279.21 | chr7:44059354:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1229:10813:1182 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chrX--chr7]""]" | chrX:70420544-chr7:44059354 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| KIF3C--GTF2I | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | KIF3C^ENSG00000084731.15 | chr2:25951803:- | GTF2I^ENSG00000263001.7 | chr7:74758780:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1186:36847:16203 | . | NO_LDAS | 0.0011 | GT | 1.9656 | AG | 1.5546 | "[""INTERCHROMOSOMAL[chr2--chr7]""]" | chr2:25951803-chr7:74758780 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| KIF2A--IPO11 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | KIF2A^ENSG00000068796.19 | chr5:62306536:+ | IPO11^ENSG00000086200.17 | chr5:62437274:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2319:22762:5344 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8892 | "[""ChimerSeq"",""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr5:0.01Mb]"",""NEIGHBORS[12947]""]" | chr5:62306536-chr5:62437274 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| KIF1C--KIF1B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | KIF1C^ENSG00000129250.12 | chr17:5007342:+ | KIF1B^ENSG00000054523.18 | chr1:10292047:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1121:35415:8735 | . | NO_LDAS | 0.0034 | GT | 1.7968 | AG | 1.8323 | "[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr17--chr1]""]" | chr17:5007342-chr1:10292047 | False | 0 | Excluded | annotation | pattern: | HGNC_GENEFAM | FAIL | 1 | |||
| KIF16B--THUMPD3-AS1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | KIF16B^ENSG00000089177.19 | chr20:16494291:- | THUMPD3-AS1^ENSG00000206573.9 | chr3:9391826:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1138:26839:27988 | . | YES_LDAS | 0.0034 | GT | 1.5329 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chr20--chr3]""]" | chr20:16494291-chr3:9391826 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| KIF13B--HBE1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | KIF13B^ENSG00000197892.13 | chr8:29190997:- | HBE1^ENSG00000213931.7 | chr11:5269588:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1108:17164:6577 | . | NO_LDAS | 0.0034 | GT | 1.6402 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr8--chr11]""]" | chr8:29190997-chr11:5269588 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| KIAA0753--PITPNM3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | KIAA0753^ENSG00000198920.11 | chr17:6589779:- | PITPNM3^ENSG00000091622.16 | chr17:6538082:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1158:11323:12826 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.5058 | "[""Babiceanu_Normal"",""INTRACHROMOSOMAL[chr17:0.02Mb]"",""NEIGHBORS[21592]""]" | chr17:6589779-chr17:6538082 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | ||||
| KDSR--FAM107B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | KDSR^ENSG00000119537.18 | chr18:63344410:- | FAM107B^ENSG00000065809.14 | chr10:14530515:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2208:46959:24022 | . | YES_LDAS | 0.0034 | GT | 1.2419 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr18--chr10]""]" | chr18:63344410-chr10:14530515 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| KDM5B--DLG2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | KDM5B^ENSG00000117139.18 | chr1:202750655:- | DLG2^ENSG00000150672.18 | chr11:83532724:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2117:45811:5442 | . | NO_LDAS | 0.0034 | GT | 1.6895 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr1--chr11]""]" | chr1:202750655-chr11:83532724 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| KDM5A--LDB2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | KDM5A^ENSG00000073614.13 | chr12:350621:- | LDB2^ENSG00000169744.13 | chr4:16759260:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1115:10012:18291 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr12--chr4]""]" | chr12:350621-chr4:16759260 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| KDM3A--GPR21 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | KDM3A^ENSG00000115548.17 | chr2:86480245:+ | GPR21^ENSG00000188394.8 | chr9:123034525:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1109:45932:23083 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr2--chr9]""]" | chr2:86480245-chr9:123034525 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| KCTD8--C5orf24 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | KCTD8^ENSG00000183783.7 | chr4:44447924:- | C5orf24^ENSG00000181904.9 | chr5:134846259:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1166:25812:11243 | . | NO_LDAS | 0.0034 | GC | 0.9183 | AG | 1.4566 | "[""INTERCHROMOSOMAL[chr4--chr5]""]" | chr4:44447924-chr5:134846259 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| KCTD20--CDK10 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | KCTD20^ENSG00000112078.14 | chr6:36443111:+ | CDK10^ENSG00000185324.22 | chr16:89690553:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1143:38060:28814 | . | NO_LDAS | 0.0034 | GT | 1.371 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr6--chr16]""]" | chr6:36443111-chr16:89690553 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| KCNQ4--MVP | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | KCNQ4^ENSG00000117013.17 | chr1:40783791:+ | MVP^ENSG00000013364.19 | chr16:29836722:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2441:17593:18417 | . | NO_LDAS | 0.0034 | GT | 1.5546 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr1--chr16]""]" | chr1:40783791-chr16:29836722 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| KCNJ4--C11orf98 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | KCNJ4^ENSG00000168135.4 | chr22:38427582:- | C11orf98^ENSG00000278615.5 | chr11:62663327:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1126:41782:18333 | . | NO_LDAS | 0.0034 | GT | 1.5301 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr22--chr11]""]" | chr22:38427582-chr11:62663327 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| KCNIP1--GLG1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | KCNIP1^ENSG00000182132.14 | chr5:170718789:+ | GLG1^ENSG00000090863.12 | chr16:74467842:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1332:43788:27133 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr5--chr16]""]" | chr5:170718789-chr16:74467842 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| KCNH8--OXSR1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | KCNH8^ENSG00000183960.9 | chr3:19347965:+ | OXSR1^ENSG00000172939.9 | chr3:38183003:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1357:16776:17282 | . | YES_LDAS | 0.0034 | GT | 1.3753 | AG | 1.7968 | "[""INTRACHROMOSOMAL[chr3:18.63Mb]""]" | chr3:19347965-chr3:38183003 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| KCNE1--SPPL2B | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | KCNE1^ENSG00000180509.12 | chr21:34449588:- | SPPL2B^ENSG00000005206.17 | chr19:2344364:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1456:14866:12014 | . | NO_LDAS | 0.0017 | GT | 1.9086 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr21--chr19]""]" | chr21:34449588-chr19:2344364 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| KCNB1--LRP6 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | KCNB1^ENSG00000158445.10 | chr20:49295736:- | LRP6^ENSG00000070018.9 | chr12:12203359:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1142:19332:29333 | . | NO_LDAS | 0.0011 | GT | 1.7056 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr20--chr12]""]" | chr20:49295736-chr12:12203359 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| KBTBD7--NELFB | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | KBTBD7^ENSG00000120696.9 | chr13:41194459:- | NELFB^ENSG00000188986.9 | chr9:137255322:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2444:1340:2794 | . | NO_LDAS | 0.0034 | GT | 1.3996 | AG | 1.5546 | "[""INTERCHROMOSOMAL[chr13--chr9]""]" | chr13:41194459-chr9:137255322 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| KAZN--PRKAR1B | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | KAZN^ENSG00000189337.17 | chr1:14924541:+ | PRKAR1B^ENSG00000188191.15 | chr7:726922:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2390:43440:26783 | . | NO_LDAS | 0.0017 | GT | 1.4295 | AG | 1.2419 | "[""INTERCHROMOSOMAL[chr1--chr7]""]" | chr1:14924541-chr7:726922 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| KAT14--RAD51AP2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | KAT14^ENSG00000149474.14 | chr20:18162513:+ | RAD51AP2^ENSG00000214842.5 | chr2:17515906:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2481:19049:25171 | . | NO_LDAS | 0.0034 | GT | 1.6895 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr20--chr2]""]" | chr20:18162513-chr2:17515906 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| KAT14--PLCB4 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | KAT14^ENSG00000149474.14 | chr20:18137976:+ | PLCB4^ENSG00000101333.18 | chr20:9401490:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1187:10991:9982 | . | NO_LDAS | 0.0034 | GT | 1.7968 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr20:8.66Mb]""]" | chr20:18137976-chr20:9401490 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| JAZF1--NFE2L3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | JAZF1^ENSG00000153814.13 | chr7:28180463:- | NFE2L3^ENSG00000050344.9 | chr7:26177943:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1295:30520:14326 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr7:1.64Mb]""]" | chr7:28180463-chr7:26177943 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| IYD--TAF12 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | IYD^ENSG00000009765.15 | chr6:150369076:+ | TAF12^ENSG00000120656.12 | chr1:28605460:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1124:26961:9646 | . | NO_LDAS | 0.0034 | GT | 1.7232 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr6--chr1]""]" | chr6:150369076-chr1:28605460 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| IWS1--HS6ST1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | IWS1^ENSG00000163166.15 | chr2:127526636:- | HS6ST1^ENSG00000136720.7 | chr2:128268870:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1168:17447:22929 | . | NO_LDAS | 0.0034 | GT | 1.8256 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr2:0.71Mb]""]" | chr2:127526636-chr2:128268870 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| IVD--NOC2L | 1 | 0 | 0.2 | 0.0 | INCL_NON_REF_SPLICE | IVD^ENSG00000128928.10 | chr15:40416103:+ | NOC2L^ENSG00000188976.11 | chr1:945599:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1276:2764:9716 | . | NO_LDAS | 0.0007 | GT | 1.9086 | AG | 1.5628 | "[""INTERCHROMOSOMAL[chr15--chr1]""]" | chr15:40416103-chr1:945599 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ITSN2--AC009065.5 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ITSN2^ENSG00000198399.15 | chr2:24299909:- | AC009065.5^ENSG00000261123.1 | chr16:2094967:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2420:45527:11902 | . | NO_LDAS | 0.0034 | GT | 1.5329 | AG | 1.371 | "[""INTERCHROMOSOMAL[chr2--chr16]""]" | chr2:24299909-chr16:2094967 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ITPKC--AC104758.2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ITPKC^ENSG00000086544.3 | chr19:40737769:+ | AC104758.2^ENSG00000260776.6 | chr15:77915902:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1287:48165:24877 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr19--chr15]""]" | chr19:40737769-chr15:77915902 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 1 | |||
| ITPKB--SIPA1L2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ITPKB^ENSG00000143772.9 | chr1:226735527:- | SIPA1L2^ENSG00000116991.11 | chr1:232574222:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1209:47364:25676 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8256 | "[""INTRACHROMOSOMAL[chr1:5.66Mb]""]" | chr1:226735527-chr1:232574222 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| ITPKB--IFT172 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ITPKB^ENSG00000143772.9 | chr1:226737374:- | IFT172^ENSG00000138002.16 | chr2:27445340:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1446:22697:4307 | . | NO_LDAS | 0.0034 | GT | 1.2867 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr1--chr2]""]" | chr1:226737374-chr2:27445340 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ITPK1--COX4I1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | ITPK1^ENSG00000100605.17 | chr14:93115855:- | COX4I1^ENSG00000131143.10 | chr16:85801205:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1284:31596:17927 | . | NO_LDAS | 0.0017 | GT | 1.2419 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr14--chr16]""]" | chr14:93115855-chr16:85801205 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ITGB5--PHBP13 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ITGB5^ENSG00000082781.12 | chr3:124773749:- | PHBP13^ENSG00000234835.1 | chr13:35251615:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1432:7601:8511 | . | NO_LDAS | 0.0034 | GC | 1.6402 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr3--chr13]""]" | chr3:124773749-chr13:35251615 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ITGA9--FAM118B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ITGA9^ENSG00000144668.12 | chr3:37542585:+ | FAM118B^ENSG00000197798.9 | chr11:126250506:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1121:14397:13555 | . | YES_LDAS | 0.0034 | GT | 1.9219 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr3--chr11]""]" | chr3:37542585-chr11:126250506 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| ITGA5--REV1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ITGA5^ENSG00000161638.11 | chr12:54418981:- | REV1^ENSG00000135945.10 | chr2:99464985:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2131:35900:1981 | . | YES_LDAS | 0.0034 | GT | 1.5301 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr12--chr2]""]" | chr12:54418981-chr2:99464985 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| ITGA4--WIPF1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ITGA4^ENSG00000115232.14 | chr2:181457851:+ | WIPF1^ENSG00000115935.18 | chr2:174585611:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1343:38384:20463 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr2:6.77Mb]""]" | chr2:181457851-chr2:174585611 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| ITFG2--LRRFIP1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ITFG2^ENSG00000111203.13 | chr12:2836956:+ | LRRFIP1^ENSG00000124831.19 | chr2:237779422:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2325:39258:19987 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr12--chr2]""]" | chr12:2836956-chr2:237779422 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| ISY1--SCART1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ISY1^ENSG00000240682.10 | chr3:129161032:- | SCART1^ENSG00000214279.13 | chr10:133467198:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1123:26475:19594 | . | NO_LDAS | 0.0034 | GT | 1.585 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr3--chr10]""]" | chr3:129161032-chr10:133467198 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| IST1--SF3B3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | IST1^ENSG00000182149.21 | chr16:71923380:+ | SF3B3^ENSG00000189091.13 | chr16:70571095:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1483:49856:13485 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr16:1.27Mb]""]" | chr16:71923380-chr16:70571095 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| IST1--AC016949.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | IST1^ENSG00000182149.21 | chr16:71922684:+ | AC016949.1^ENSG00000230732.4 | chr3:196913007:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1375:26249:2331 | . | NO_LDAS | 0.0034 | GT | 1.7465 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr16--chr3]""]" | chr16:71922684-chr3:196913007 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ISOC2--FECH | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | ISOC2^ENSG00000063241.8 | chr19:55453026:- | FECH^ENSG00000066926.12 | chr18:57573365:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1266:9939:6983 | . | NO_LDAS | 0.0017 | GT | 1.9656 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr19--chr18]""]" | chr19:55453026-chr18:57573365 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| IRGQ--PRKAR1B | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | IRGQ^ENSG00000167378.8 | chr19:43592632:- | PRKAR1B^ENSG00000188191.15 | chr7:726922:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1151:50333:18571 | . | NO_LDAS | 0.0034 | GT | 1.6402 | AG | 1.2419 | "[""INTERCHROMOSOMAL[chr19--chr7]""]" | chr19:43592632-chr7:726922 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| IPO9--VAMP8 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | IPO9^ENSG00000198700.10 | chr1:201878990:+ | VAMP8^ENSG00000118640.11 | chr2:85579012:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2242:14510:17563 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr1--chr2]""]" | chr1:201878990-chr2:85579012 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| IPO5--ZAN | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | IPO5^ENSG00000065150.21 | chr13:97976786:+ | ZAN^ENSG00000146839.19 | chr7:100736873:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1121:18709:23994 | . | NO_LDAS | 0.0017 | GT | 1.5219 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr13--chr7]""]" | chr13:97976786-chr7:100736873 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| IPO5--SLC6A10P | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | IPO5^ENSG00000065150.21 | chr13:97976786:+ | SLC6A10P^ENSG00000214617.9 | chr16:32881420:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1121:18709:23994 | . | NO_LDAS | 0.0017 | GT | 1.5219 | AG | 1.3753 | "[""INTERCHROMOSOMAL[chr13--chr16]""]" | chr13:97976786-chr16:32881420 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| IPO5--AL357874.3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | IPO5^ENSG00000065150.21 | chr13:97976786:+ | AL357874.3^ENSG00000288586.1 | chr9:35604741:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1105:13014:22705 | . | NO_LDAS | 0.0034 | GT | 1.5219 | AG | 1.3753 | "[""INTERCHROMOSOMAL[chr13--chr9]""]" | chr13:97976786-chr9:35604741 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| INSR--TBC1D5 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | INSR^ENSG00000171105.14 | chr19:7184361:- | TBC1D5^ENSG00000131374.14 | chr3:17740703:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1331:2715:27455 | . | NO_LDAS | 0.0034 | GT | 1.3996 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr19--chr3]""]" | chr19:7184361-chr3:17740703 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| INPP4A--GTF2F1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | INPP4A^ENSG00000040933.16 | chr2:98554493:+ | GTF2F1^ENSG00000125651.14 | chr19:6383495:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1158:9664:11411 | . | NO_LDAS | 0.0034 | GT | 1.3383 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr2--chr19]""]" | chr2:98554493-chr19:6383495 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| INO80--AC025470.2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | INO80^ENSG00000128908.17 | chr15:40985338:- | AC025470.2^ENSG00000250961.2 | chr5:57395120:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1144:18919:28086 | . | NO_LDAS | 0.0034 | GT | 1.6895 | AG | 1.5546 | "[""INTERCHROMOSOMAL[chr15--chr5]""]" | chr15:40985338-chr5:57395120 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| INMT--MINDY4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | INMT^ENSG00000241644.2 | chr7:30753938:+ | MINDY4^ENSG00000106125.14 | chr7:30778432:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2477:39508:2738 | . | NO_LDAS | 0.0034 | GT | 1.7056 | AG | 1.7968 | "[""INTRACHROMOSOMAL[chr7:0.01Mb]"",""NEIGHBORS[13815]""]" | chr7:30753938-chr7:30778432 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | ||||
| INAFM2--NTN1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | INAFM2^ENSG00000259330.3 | chr15:40323859:+ | NTN1^ENSG00000065320.9 | chr17:9022395:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2152:40414:26026 | . | NO_LDAS | 0.0034 | GT | 1.231 | AG | 1.3996 | "[""INTERCHROMOSOMAL[chr15--chr17]""]" | chr15:40323859-chr17:9022395 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| IL34--AC020763.4 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | IL34^ENSG00000157368.11 | chr16:70660145:+ | AC020763.4^ENSG00000279569.1 | chr16:70662091:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1263:36337:1841 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.5656 | "[""INTRACHROMOSOMAL[chr16:0.00Mb]"",""NEIGHBORS[985]""]" | chr16:70660145-chr16:70662091 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | ||||
| IL2RB--RTL8C | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | IL2RB^ENSG00000100385.14 | chr22:37126768:- | RTL8C^ENSG00000134590.14 | chrX:135032950:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1201:25141:6997 | . | NO_LDAS | 0.0034 | GT | 1.2366 | AG | 1.2419 | "[""INTERCHROMOSOMAL[chr22--chrX]""]" | chr22:37126768-chrX:135032950 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| IL17RA--SREBF2 | 1 | 0 | 0.14 | 0.0 | INCL_NON_REF_SPLICE | IL17RA^ENSG00000177663.14 | chr22:17108611:+ | SREBF2^ENSG00000198911.12 | chr22:41833304:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2153:46814:11691 | . | NO_LDAS | 0.0005 | GT | 1.231 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr22:24.72Mb]""]" | chr22:17108611-chr22:41833304 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| IKBKE--JMJD7 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | IKBKE^ENSG00000263528.8 | chr1:206476810:+ | JMJD7^ENSG00000243789.11 | chr15:41836475:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2465:45107:18712 | . | NO_LDAS | 0.0034 | GT | 1.5628 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr1--chr15]""]" | chr1:206476810-chr15:41836475 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| IGDCC4--LRP5 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | IGDCC4^ENSG00000103742.12 | chr15:65396907:- | LRP5^ENSG00000162337.12 | chr11:68425172:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1139:40957:9001 | . | YES_LDAS | 0.0034 | GT | 1.6402 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr15--chr11]""]" | chr15:65396907-chr11:68425172 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| IFT80--THBS3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | IFT80^ENSG00000068885.15 | chr3:160391546:- | THBS3^ENSG00000169231.13 | chr1:155206406:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2188:42089:25816 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr3--chr1]""]" | chr3:160391546-chr1:155206406 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | ||||
| IFT172--INTS8 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | IFT172^ENSG00000138002.16 | chr2:27447515:- | INTS8^ENSG00000164941.14 | chr8:94859511:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1205:4721:10612 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr2--chr8]""]" | chr2:27447515-chr8:94859511 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| IFT122--AL133375.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | IFT122^ENSG00000163913.12 | chr3:129514072:+ | AL133375.1^ENSG00000245261.1 | chr6:43223135:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2413:37025:26124 | . | NO_LDAS | 0.0034 | GT | 1.6402 | AG | 1.5329 | "[""INTERCHROMOSOMAL[chr3--chr6]""]" | chr3:129514072-chr6:43223135 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| IER2--SRP14 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | IER2^ENSG00000160888.7 | chr19:13152229:+ | SRP14^ENSG00000140319.11 | chr15:40036421:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2140:45091:28800 | . | NO_LDAS | 0.0034 | GT | 1.6895 | AG | 1.585 | "[""INTERCHROMOSOMAL[chr19--chr15]""]" | chr19:13152229-chr15:40036421 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| HYOU1--LINC02782 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | HYOU1^ENSG00000149428.19 | chr11:119049018:- | LINC02782^ENSG00000231510.1 | chr1:5090623:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1140:10538:20575 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.5329 | "[""INTERCHROMOSOMAL[chr11--chr1]""]" | chr11:119049018-chr1:5090623 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| HYI--GOLGA8VP | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | HYI^ENSG00000178922.18 | chr1:43452899:- | GOLGA8VP^ENSG00000259236.1 | chr15:101774893:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1447:25925:2443 | . | NO_LDAS | 0.0011 | GT | 1.9329 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr1--chr15]""]" | chr1:43452899-chr15:101774893 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| HSPA7--HSPA8P4 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | HSPA7^ENSG00000225217.1 | chr1:161607629:+ | HSPA8P4^ENSG00000248610.1 | chr5:130141361:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1189:7035:7474 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr1--chr5]""]" | chr1:161607629-chr5:130141361 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| HSF4--DPP9 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | HSF4^ENSG00000102878.17 | chr16:67169348:+ | DPP9^ENSG00000142002.18 | chr19:4705970:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1216:42340:27876 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr16--chr19]""]" | chr16:67169348-chr19:4705970 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| HSD52--TCEA1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | HSD52^ENSG00000224609.8 | chr1:59146866:- | TCEA1^ENSG00000187735.14 | chr8:54022301:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2265:10676:26979 | . | NO_LDAS | 0.0017 | GT | 1.053 | AG | 0.9183 | "[""INTERCHROMOSOMAL[chr1--chr8]""]" | chr1:59146866-chr8:54022301 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| HSD17B12--EXT2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | HSD17B12^ENSG00000149084.13 | chr11:43840064:+ | EXT2^ENSG00000151348.15 | chr11:44171611:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1235:26395:23854 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.5301 | "[""INTRACHROMOSOMAL[chr11:0.24Mb]""]" | chr11:43840064-chr11:44171611 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| HRAS--TMEM132D | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | HRAS^ENSG00000174775.17 | chr11:535286:- | TMEM132D^ENSG00000151952.16 | chr12:129081995:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1272:39266:21234 | . | NO_LDAS | 0.0034 | GT | 1.053 | AG | 1.231 | "[""INTERCHROMOSOMAL[chr11--chr12]""]" | chr11:535286-chr12:129081995 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| HOXA11-AS--LTN1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | HOXA11-AS^ENSG00000240990.10 | chr7:27184620:+ | LTN1^ENSG00000198862.14 | chr21:28960832:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2359:35933:10893 | . | NO_LDAS | 0.0017 | GT | 1.2867 | AG | 0.8366 | "[""INTERCHROMOSOMAL[chr7--chr21]""]" | chr7:27184620-chr21:28960832 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| HOXA10--NEK6 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | HOXA10^ENSG00000253293.5 | chr7:27174141:- | NEK6^ENSG00000119408.17 | chr9:124257949:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2196:23167:18319 | . | NO_LDAS | 0.0034 | GT | 1.1589 | AG | 1.1589 | "[""INTERCHROMOSOMAL[chr7--chr9]""]" | chr7:27174141-chr9:124257949 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| HOXA10--ABHD17B | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | HOXA10^ENSG00000253293.5 | chr7:27174141:- | ABHD17B^ENSG00000107362.14 | chr9:71911010:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2403:16598:11397 | . | NO_LDAS | 0.0017 | GT | 1.1589 | AG | 1.1589 | "[""INTERCHROMOSOMAL[chr7--chr9]""]" | chr7:27174141-chr9:71911010 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| HNRNPM--ARRDC3-AS1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | HNRNPM^ENSG00000099783.12 | chr19:8471427:+ | ARRDC3-AS1^ENSG00000281357.3 | chr5:91611842:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1374:49985:3648 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.4295 | "[""INTERCHROMOSOMAL[chr19--chr5]""]" | chr19:8471427-chr5:91611842 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| HNRNPK--OR4Q3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | HNRNPK^ENSG00000165119.21 | chr9:83971686:- | OR4Q3^ENSG00000182652.4 | chr14:19747780:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1493:33174:6395 | . | NO_LDAS | 0.0034 | GT | 1.8062 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr9--chr14]""]" | chr9:83971686-chr14:19747780 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 1 | |||
| HNRNPF--RCOR1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | HNRNPF^ENSG00000169813.16 | chr10:43387146:- | RCOR1^ENSG00000089902.10 | chr14:102593266:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2405:26872:14284 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr10--chr14]""]" | chr10:43387146-chr14:102593266 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| HNRNPA3--PLCD4 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | HNRNPA3^ENSG00000170144.21 | chr2:177222657:+ | PLCD4^ENSG00000115556.14 | chr2:218629022:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1311:8378:22495 | . | NO_LDAS | 0.0034 | GT | 1.053 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr2:41.38Mb]""]" | chr2:177222657-chr2:218629022 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| HMGXB4--NUCKS1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | HMGXB4^ENSG00000100281.14 | chr22:35283991:+ | NUCKS1^ENSG00000069275.13 | chr1:205729621:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1338:7610:11299 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.5656 | "[""INTERCHROMOSOMAL[chr22--chr1]""]" | chr22:35283991-chr1:205729621 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| HMGN1--BATF3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | HMGN1^ENSG00000205581.11 | chr21:39348292:- | BATF3^ENSG00000123685.9 | chr1:212697065:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1119:6218:14634 | . | YES_LDAS | 0.0034 | GT | 1.5219 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr21--chr1]""]" | chr21:39348292-chr1:212697065 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| HMG20B--STK24P1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | HMG20B^ENSG00000064961.19 | chr19:3575660:+ | STK24P1^ENSG00000230079.1 | chrX:136296077:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1366:37284:1659 | . | NO_LDAS | 0.0034 | GT | 1.4716 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr19--chrX]""]" | chr19:3575660-chrX:136296077 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| HLF--HSP90AB3P | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | HLF^ENSG00000108924.14 | chr17:55265062:+ | HSP90AB3P^ENSG00000183199.6 | chr4:87892536:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1366:26306:2822 | . | NO_LDAS | 0.0034 | GT | 0.9056 | AG | 1.2729 | "[""INTERCHROMOSOMAL[chr17--chr4]""]" | chr17:55265062-chr4:87892536 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| HLA-A--SECTM1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | HLA-A^ENSG00000206503.13 | chr6:29945095:+ | SECTM1^ENSG00000141574.8 | chr17:82329322:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1284:51603:15447 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr6--chr17]""]" | chr6:29945095-chr17:82329322 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| HLA-A--CCNL2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | HLA-A^ENSG00000206503.13 | chr6:29943543:+ | CCNL2^ENSG00000221978.12 | chr1:1398299:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1188:20505:26460 | . | NO_LDAS | 0.0034 | GT | 1.7056 | AG | 1.5656 | "[""INTERCHROMOSOMAL[chr6--chr1]""]" | chr6:29943543-chr1:1398299 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| HIP1R--PLEKHA8 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | HIP1R^ENSG00000130787.14 | chr12:122859536:+ | PLEKHA8^ENSG00000106086.20 | chr7:30118043:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1254:52088:10374 | . | NO_LDAS | 0.0034 | GT | 1.6729 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr12--chr7]""]" | chr12:122859536-chr7:30118043 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| HIKESHI--PICALM | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | HIKESHI^ENSG00000149196.16 | chr11:86306482:+ | PICALM^ENSG00000073921.18 | chr11:85959060:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1197:14980:15769 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.7056 | "[""DEEPEST2019"",""INTRACHROMOSOMAL[chr11:0.23Mb]""]" | chr11:86306482-chr11:85959060 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| HEXD-IT1--AP000911.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | HEXD-IT1^ENSG00000279066.1 | chr17:82426087:+ | AP000911.1^ENSG00000254648.1 | chr11:134037024:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1163:40892:18221 | . | NO_LDAS | 0.0034 | GT | 1.2729 | AG | 1.053 | "[""INTERCHROMOSOMAL[chr17--chr11]""]" | chr17:82426087-chr11:134037024 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| HENMT1--TMEM80 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | HENMT1^ENSG00000162639.16 | chr1:108661041:- | TMEM80^ENSG00000177042.15 | chr11:698873:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1213:37737:10066 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr1--chr11]""]" | chr1:108661041-chr11:698873 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| HELZ--LRRFIP1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | HELZ^ENSG00000198265.12 | chr17:67107169:- | LRRFIP1^ENSG00000124831.19 | chr2:237813592:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1266:20796:3396 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.5329 | "[""INTERCHROMOSOMAL[chr17--chr2]""]" | chr17:67107169-chr2:237813592 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| HECW1--DDX19A | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | HECW1^ENSG00000002746.15 | chr7:43484193:+ | DDX19A^ENSG00000168872.17 | chr16:70371372:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2405:35795:1659 | . | NO_LDAS | 0.0017 | GT | 1.9329 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr7--chr16]""]" | chr7:43484193-chr16:70371372 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| HEATR3--SYNE3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | HEATR3^ENSG00000155393.13 | chr16:50066468:+ | SYNE3^ENSG00000176438.12 | chr14:95411010:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1406:25173:25325 | . | NO_LDAS | 0.0034 | GT | 1.5219 | AG | 1.5546 | "[""INTERCHROMOSOMAL[chr16--chr14]""]" | chr16:50066468-chr14:95411010 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| HDGF--SIAH1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | HDGF^ENSG00000143321.19 | chr1:156751343:- | SIAH1^ENSG00000196470.12 | chr16:48362430:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2260:29590:29669 | . | YES_LDAS | 0.0034 | GT | 1.5628 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr1--chr16]""]" | chr1:156751343-chr16:48362430 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| HCFC2--CUL1 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | HCFC2^ENSG00000111727.12 | chr12:104102165:+ | CUL1^ENSG00000055130.17 | chr7:148698583:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1169:15700:3760 | . | NO_LDAS | 0.0011 | GT | 1.8323 | AG | 0.9968 | "[""INTERCHROMOSOMAL[chr12--chr7]""]" | chr12:104102165-chr7:148698583 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| HAUS1--TXNDC12 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | HAUS1^ENSG00000152240.13 | chr18:46105368:+ | TXNDC12^ENSG00000117862.13 | chr1:52021012:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1151:35067:3396 | . | NO_LDAS | 0.0034 | GT | 1.7968 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr18--chr1]""]" | chr18:46105368-chr1:52021012 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| HARS1--AL603783.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | HARS1^ENSG00000170445.16 | chr5:140690855:- | AL603783.1^ENSG00000287823.1 | chr6:170093548:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1141:51563:20057 | . | NO_LDAS | 0.0034 | GT | 1.5628 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr5--chr6]""]" | chr5:140690855-chr6:170093548 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| HACE1--MBOAT1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | HACE1^ENSG00000085382.12 | chr6:104771193:- | MBOAT1^ENSG00000172197.11 | chr6:20152769:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1187:21735:1518 | . | YES_LDAS | 0.0034 | GT | 1.1033 | AG | 1.5058 | "[""INTRACHROMOSOMAL[chr6:84.52Mb]""]" | chr6:104771193-chr6:20152769 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| HABP4--AP001172.1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | HABP4^ENSG00000130956.14 | chr9:96458541:+ | AP001172.1^ENSG00000270071.3 | chr21:16296700:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1266:11760:21290 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr9--chr21]""]" | chr9:96458541-chr21:16296700 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| H6PD--ARHGAP4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | H6PD^ENSG00000049239.13 | chr1:9245561:+ | ARHGAP4^ENSG00000089820.16 | chrX:153907962:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1140:31645:2093 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr1--chrX]""]" | chr1:9245561-chrX:153907962 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| H2BC5--CCNB3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | H2BC5^ENSG00000158373.8 | chr6:26158559:+ | CCNB3^ENSG00000147082.18 | chrX:50285127:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2325:15570:10991 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr6--chrX]""]" | chr6:26158559-chrX:50285127 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| H2AZP1--AL109766.1 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | H2AZP1^ENSG00000213440.2 | chr21:44046434:- | AL109766.1^ENSG00000259137.1 | chr14:44120506:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1155:4179:21780 | . | NO_LDAS | 0.0011 | GT | 1.9656 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr21--chr14]""]" | chr21:44046434-chr14:44120506 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| GUSBP13--NAIP | 1 | 0 | 0.11 | 0.0 | ONLY_REF_SPLICE | GUSBP13^ENSG00000198237.8 | chr5:69920867:+ | NAIP^ENSG00000249437.8 | chr5:71003857:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2184:7383:9674 | . | YES_LDAS | 0.0004 | GT | 1.9329 | AG | 1.8295 | "[""INTRACHROMOSOMAL[chr5:1.05Mb]""]" | chr5:69920867-chr5:71003857 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| GUSBP1--PDZD2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | GUSBP1^ENSG00000183666.17 | chr5:21461866:+ | PDZD2^ENSG00000133401.16 | chr5:32048539:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1329:23709:14578 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8323 | "[""INTRACHROMOSOMAL[chr5:10.05Mb]""]" | chr5:21461866-chr5:32048539 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| GUCY1A1--GPBP1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | GUCY1A1^ENSG00000164116.17 | chr4:155733644:+ | GPBP1^ENSG00000062194.16 | chr5:57246300:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2176:4964:24204 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr4--chr5]""]" | chr4:155733644-chr5:57246300 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| GTF3C2--KDSR | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | GTF3C2^ENSG00000115207.13 | chr2:27356739:- | KDSR^ENSG00000119537.18 | chr18:63362868:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2345:47825:11397 | . | YES_LDAS | 0.0034 | GT | 1.8295 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr2--chr18]""]" | chr2:27356739-chr18:63362868 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| GTF2IRD2--EIF2S1 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | GTF2IRD2^ENSG00000196275.14 | chr7:74851367:- | EIF2S1^ENSG00000134001.15 | chr14:67364767:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1132:47655:21948 | . | NO_LDAS | 0.0017 | GT | 1.6402 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr7--chr14]""]" | chr7:74851367-chr14:67364767 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| GTF2IP14--AC024405.2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | GTF2IP14^ENSG00000226002.1 | chr7:65091952:+ | AC024405.2^ENSG00000254840.1 | chr11:50315415:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1316:10522:28674 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr7--chr11]""]" | chr7:65091952-chr11:50315415 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| GTDC1--ARHGAP15 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | GTDC1^ENSG00000121964.14 | chr2:143970653:- | ARHGAP15^ENSG00000075884.14 | chr2:143435601:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1121:49888:9253 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.7465 | "[""INTRACHROMOSOMAL[chr2:0.17Mb]""]" | chr2:143970653-chr2:143435601 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| GSDMC--RNF41 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | GSDMC^ENSG00000147697.9 | chr8:129776102:- | RNF41^ENSG00000181852.18 | chr12:56207749:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1198:26184:26460 | . | YES_LDAS | 0.0034 | GT | 1.7232 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr8--chr12]""]" | chr8:129776102-chr12:56207749 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| GRM4--HMGN1 | 1 | 0 | 0.25 | 0.0 | INCL_NON_REF_SPLICE | GRM4^ENSG00000124493.14 | chr6:34103581:- | HMGN1^ENSG00000205581.11 | chr21:39348323:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2270:23328:21626 | . | NO_LDAS | 0.0009 | GT | 1.7232 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr6--chr21]""]" | chr6:34103581-chr21:39348323 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| GRK5--NEUROD2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | GRK5^ENSG00000198873.12 | chr10:119207663:+ | NEUROD2^ENSG00000171532.5 | chr17:39607877:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1370:19793:18698 | . | NO_LDAS | 0.0034 | GT | 1.0389 | AG | 1.231 | "[""INTERCHROMOSOMAL[chr10--chr17]""]" | chr10:119207663-chr17:39607877 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| GRK1--DOCK9 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | GRK1^ENSG00000185974.7 | chr13:113735911:+ | DOCK9^ENSG00000088387.19 | chr13:98955551:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2251:43262:1112 | . | NO_LDAS | 0.0034 | GT | 1.5219 | AG | 1.7465 | "[""INTRACHROMOSOMAL[chr13:14.58Mb]""]" | chr13:113735911-chr13:98955551 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| GRHL2--TTK | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | GRHL2^ENSG00000083307.12 | chr8:101492789:+ | TTK^ENSG00000112742.10 | chr6:80022324:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1269:20740:9772 | . | NO_LDAS | 0.0034 | GT | 1.7465 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr8--chr6]""]" | chr8:101492789-chr6:80022324 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| GPRIN2--NPY4R | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | GPRIN2^ENSG00000204175.5 | chr10:46554585:- | NPY4R^ENSG00000204174.8 | chr10:46462694:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1146:13289:11523 | . | YES_LDAS | 0.0017 | GT | 1.6402 | AG | 1.9219 | "[""INTRACHROMOSOMAL[chr10:0.08Mb]"",""NEIGHBORS[83086]""]" | chr10:46554585-chr10:46462694 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | ||||
| GPR61--MESD | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | GPR61^ENSG00000156097.12 | chr1:109545530:+ | MESD^ENSG00000117899.11 | chr15:80977733:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2395:27381:27385 | . | NO_LDAS | 0.0034 | GT | 1.3996 | AG | 1.6729 | "[""INTERCHROMOSOMAL[chr1--chr15]""]" | chr1:109545530-chr15:80977733 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| GPR52--AL136982.4 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | GPR52^ENSG00000203737.5 | chr1:174448038:+ | AL136982.4^ENSG00000261011.1 | chr10:87008355:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2184:26265:22817 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr1--chr10]""]" | chr1:174448038-chr10:87008355 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| GPR153--GREB1L | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | GPR153^ENSG00000158292.7 | chr1:6260866:- | GREB1L^ENSG00000141449.15 | chr18:21499858:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1219:20068:12896 | . | NO_LDAS | 0.0011 | GC | 1.5058 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr1--chr18]""]" | chr1:6260866-chr18:21499858 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| GPHN--DAAM1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | GPHN^ENSG00000171723.16 | chr14:66508591:+ | DAAM1^ENSG00000100592.16 | chr14:59263441:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1116:14130:16764 | . | NO_LDAS | 0.0034 | GT | 1.9899 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr14:7.14Mb]""]" | chr14:66508591-chr14:59263441 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| GPC5-IT1--CEP295NL | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | GPC5-IT1^ENSG00000236240.1 | chr13:92509582:+ | CEP295NL^ENSG00000178404.10 | chr17:78873912:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2267:42744:16526 | . | NO_LDAS | 0.0034 | GT | 1.5546 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr13--chr17]""]" | chr13:92509582-chr17:78873912 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| GPC5--PLPP3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | GPC5^ENSG00000179399.15 | chr13:91448922:+ | PLPP3^ENSG00000162407.9 | chr1:56537112:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1216:14785:6549 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.371 | "[""INTERCHROMOSOMAL[chr13--chr1]""]" | chr13:91448922-chr1:56537112 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| GOLM2--USP8 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | GOLM2^ENSG00000166734.20 | chr15:44338317:+ | USP8^ENSG00000138592.14 | chr15:50462280:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2317:51207:4447 | . | YES_LDAS | 0.0017 | GT | 1.8323 | AG | 1.6895 | "[""INTRACHROMOSOMAL[chr15:6.01Mb]""]" | chr15:44338317-chr15:50462280 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| GOLGA6L10--YTHDF2 | 1 | 0 | 0.08 | 0.0 | INCL_NON_REF_SPLICE | GOLGA6L10^ENSG00000278662.5 | chr15:82345809:- | YTHDF2^ENSG00000198492.16 | chr1:28743819:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2437:12860:21710 | . | NO_LDAS | 0.0003 | GT | 1.7465 | AG | 1.4256 | "[""INTERCHROMOSOMAL[chr15--chr1]""]" | chr15:82345809-chr1:28743819 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| GOLGA2--MTPAP | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | GOLGA2^ENSG00000167110.18 | chr9:128261172:- | MTPAP^ENSG00000107951.15 | chr10:30368650:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1441:35043:16105 | . | NO_LDAS | 0.0034 | GT | 1.8323 | AG | 1.6049 | "[""INTERCHROMOSOMAL[chr9--chr10]""]" | chr9:128261172-chr10:30368650 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| GNS--HLA-A | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | GNS^ENSG00000135677.11 | chr12:64715124:- | HLA-A^ENSG00000206503.13 | chr6:29945059:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2310:11695:16329 | . | NO_LDAS | 0.0017 | GT | 1.6402 | AG | 1.2729 | "[""INTERCHROMOSOMAL[chr12--chr6]""]" | chr12:64715124-chr6:29945059 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| GNPTG--D2HGDH | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | GNPTG^ENSG00000090581.10 | chr16:1352306:+ | D2HGDH^ENSG00000180902.18 | chr2:241767710:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1101:46490:8272 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr16--chr2]""]" | chr16:1352306-chr2:241767710 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| GNG10--UGCG | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | GNG10^ENSG00000242616.4 | chr9:111666946:+ | UGCG^ENSG00000148154.10 | chr9:111914605:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1186:36636:15307 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.7819 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr9:0.23Mb]""]" | chr9:111666946-chr9:111914605 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 |
| GNAI3--ARHGEF26 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | GNAI3^ENSG00000065135.12 | chr1:109595117:+ | ARHGEF26^ENSG00000114790.13 | chr3:154129574:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1171:47687:23994 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr1--chr3]""]" | chr1:109595117-chr3:154129574 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| GMNN--ZNF451 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | GMNN^ENSG00000112312.10 | chr6:24777297:+ | ZNF451^ENSG00000112200.17 | chr6:57150719:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1128:43432:25984 | . | YES_LDAS | 0.0034 | GT | 1.2419 | AG | 1.5656 | "[""INTRACHROMOSOMAL[chr6:32.30Mb]""]" | chr6:24777297-chr6:57150719 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| GLYR1--ADCY7 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | GLYR1^ENSG00000140632.17 | chr16:4847279:- | ADCY7^ENSG00000121281.13 | chr16:50291736:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2183:6881:8525 | . | NO_LDAS | 0.0034 | GT | 1.4566 | AG | 1.5219 | "[""INTRACHROMOSOMAL[chr16:45.40Mb]""]" | chr16:4847279-chr16:50291736 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| GLS--RNF175 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | GLS^ENSG00000115419.13 | chr2:190895248:+ | RNF175^ENSG00000145428.15 | chr4:153759817:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1188:19558:15377 | . | NO_LDAS | 0.0034 | GT | 1.4295 | AG | 1.3383 | "[""INTERCHROMOSOMAL[chr2--chr4]""]" | chr2:190895248-chr4:153759817 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| GLRA2--PITPNA | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | GLRA2^ENSG00000101958.14 | chrX:14529875:+ | PITPNA^ENSG00000174238.15 | chr17:1534143:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1329:6040:12000 | . | NO_LDAS | 0.0011 | AT | 1.9656 | AC | 1.9086 | "[""INTERCHROMOSOMAL[chrX--chr17]""]" | chrX:14529875-chr17:1534143 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| GLCCI1--PAM | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | GLCCI1^ENSG00000106415.13 | chr7:8004059:+ | PAM^ENSG00000145730.20 | chr5:102946837:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1121:50042:25830 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr7--chr5]""]" | chr7:8004059-chr5:102946837 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| GID4--KCNJ3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | GID4^ENSG00000141034.10 | chr17:18039613:+ | KCNJ3^ENSG00000162989.5 | chr2:154698662:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1479:15497:22607 | . | NO_LDAS | 0.0034 | GC | 1.4716 | AG | 1.371 | "[""INTERCHROMOSOMAL[chr17--chr2]""]" | chr17:18039613-chr2:154698662 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| GID4--ADAM22 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | GID4^ENSG00000141034.10 | chr17:18039609:+ | ADAM22^ENSG00000008277.14 | chr7:87934250:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1311:25270:29053 | . | NO_LDAS | 0.0017 | GT | 1.053 | AG | 1.5546 | "[""INTERCHROMOSOMAL[chr17--chr7]""]" | chr17:18039609-chr7:87934250 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| GGA1--PTGFRN | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | GGA1^ENSG00000100083.19 | chr22:37630162:+ | PTGFRN^ENSG00000134247.10 | chr1:116967280:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2426:40552:19594 | . | NO_LDAS | 0.0011 | GT | 1.7819 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr22--chr1]""]" | chr22:37630162-chr1:116967280 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| GGA1--HIPK1 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | GGA1^ENSG00000100083.19 | chr22:37630162:+ | HIPK1^ENSG00000163349.22 | chr1:113973062:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2426:40552:19594 | . | NO_LDAS | 0.0011 | GT | 1.7819 | AG | 1.5219 | "[""INTERCHROMOSOMAL[chr22--chr1]""]" | chr22:37630162-chr1:113973062 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| GGA1--AC099522.1 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | GGA1^ENSG00000100083.19 | chr22:37630162:+ | AC099522.1^ENSG00000249149.2 | chr5:73397560:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2426:40552:19594 | . | NO_LDAS | 0.0011 | GT | 1.7819 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr22--chr5]""]" | chr22:37630162-chr5:73397560 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| GET4--TGFBI | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | GET4^ENSG00000239857.7 | chr7:884614:+ | TGFBI^ENSG00000120708.17 | chr5:136052976:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1344:15797:14522 | . | NO_LDAS | 0.0011 | GT | 1.4566 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr7--chr5]""]" | chr7:884614-chr5:136052976 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| GDF2--PKP4 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | GDF2^ENSG00000263761.3 | chr10:47327227:+ | PKP4^ENSG00000144283.22 | chr2:158669791:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1106:1979:3508 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr10--chr2]""]" | chr10:47327227-chr2:158669791 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| GCC2-AS1--PLGLB1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | GCC2-AS1^ENSG00000214184.3 | chr2:108511930:- | PLGLB1^ENSG00000183281.15 | chr2:87003168:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2480:32090:9505 | . | YES_LDAS | 0.0034 | GT | 1.5329 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr2:21.49Mb]""]" | chr2:108511930-chr2:87003168 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| GCC2--AC010478.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | GCC2^ENSG00000135968.21 | chr2:108451112:+ | AC010478.1^ENSG00000259663.2 | chr5:51375111:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2261:17601:21738 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.5301 | "[""INTERCHROMOSOMAL[chr2--chr5]""]" | chr2:108451112-chr5:51375111 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| GATD1--ZADH2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | GATD1^ENSG00000177225.17 | chr11:777399:- | ZADH2^ENSG00000180011.7 | chr18:75202340:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1430:30051:16960 | . | YES_LDAS | 0.0034 | GT | 1.4295 | AG | 1.4566 | "[""INTERCHROMOSOMAL[chr11--chr18]""]" | chr11:777399-chr18:75202340 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| GANC--CAPN3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | GANC^ENSG00000214013.9 | chr15:42352124:+ | CAPN3^ENSG00000092529.25 | chr15:42384483:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1192:51660:1336 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8062 | "[""INTRACHROMOSOMAL[chr15:0.00Mb]"",""NEIGHBORS[2563]""]" | chr15:42352124-chr15:42384483 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | ||||
| GALC--PSME4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | GALC^ENSG00000054983.17 | chr14:87893356:- | PSME4^ENSG00000068878.15 | chr2:53940000:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1337:50713:8861 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chr14--chr2]""]" | chr14:87893356-chr2:53940000 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | ||||
| GAL--LINC01588 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | GAL^ENSG00000069482.7 | chr11:68685004:+ | LINC01588^ENSG00000214900.11 | chr14:50090438:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1226:34735:29221 | . | NO_LDAS | 0.0034 | GT | 1.5058 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr11--chr14]""]" | chr11:68685004-chr14:50090438 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| GABARAPL2--CAPZB | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | GABARAPL2^ENSG00000034713.8 | chr16:75566491:+ | CAPZB^ENSG00000077549.19 | chr1:19419748:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1105:39072:22915 | . | NO_LDAS | 0.0034 | GT | 1.7465 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr16--chr1]""]" | chr16:75566491-chr1:19419748 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| G3BP2--BRIP1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | G3BP2^ENSG00000138757.15 | chr4:75648639:- | BRIP1^ENSG00000136492.9 | chr17:61683675:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1354:34719:6128 | . | NO_LDAS | 0.0034 | GT | 1.5656 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr4--chr17]""]" | chr4:75648639-chr17:61683675 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| FSBP--TMEM67 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FSBP^ENSG00000265817.4 | chr8:94399414:- | TMEM67^ENSG00000164953.16 | chr8:93758483:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1404:18337:12280 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.7465 | "[""INTRACHROMOSOMAL[chr8:0.56Mb]""]" | chr8:94399414-chr8:93758483 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| FRY--SCYL1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | FRY^ENSG00000073910.23 | chr13:31950342:+ | SCYL1^ENSG00000142186.17 | chr11:65526783:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1263:25319:9435 | . | NO_LDAS | 0.0034 | GT | 1.2729 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr13--chr11]""]" | chr13:31950342-chr11:65526783 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| FRMPD4--HOPX | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | FRMPD4^ENSG00000169933.16 | chrX:12707618:+ | HOPX^ENSG00000171476.22 | chr4:56648797:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2384:51360:13821 | . | NO_LDAS | 0.0034 | GT | 1.6402 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chrX--chr4]""]" | chrX:12707618-chr4:56648797 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| FRMPD3--NUMBL | 1 | 0 | 0.25 | 0.0 | INCL_NON_REF_SPLICE | FRMPD3^ENSG00000147234.10 | chrX:107603268:+ | NUMBL^ENSG00000105245.9 | chr19:40668007:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2139:33044:23013 | . | YES_LDAS | 0.0009 | GT | 1.585 | AG | 1.5058 | "[""INTERCHROMOSOMAL[chrX--chr19]""]" | chrX:107603268-chr19:40668007 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| FRMPD3--MAML3 | 1 | 0 | 0.25 | 0.0 | INCL_NON_REF_SPLICE | FRMPD3^ENSG00000147234.10 | chrX:107603268:+ | MAML3^ENSG00000196782.12 | chr4:139889524:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2139:33044:23013 | . | YES_LDAS | 0.0009 | GT | 1.585 | AG | 1.5058 | "[""INTERCHROMOSOMAL[chrX--chr4]""]" | chrX:107603268-chr4:139889524 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| FRMD8--RNA5SP174 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | FRMD8^ENSG00000126391.14 | chr11:65411574:+ | RNA5SP174^ENSG00000199572.1 | chr4:190015160:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2450:43869:8693 | . | NO_LDAS | 0.0034 | GC | 1.9329 | AG | 1.5546 | "[""INTERCHROMOSOMAL[chr11--chr4]""]" | chr11:65411574-chr4:190015160 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| FRMD4A--SIPA1L3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FRMD4A^ENSG00000151474.23 | chr10:13659323:- | SIPA1L3^ENSG00000105738.11 | chr19:38192145:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1164:14551:14606 | . | NO_LDAS | 0.0034 | GT | 1.9219 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr10--chr19]""]" | chr10:13659323-chr19:38192145 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| FPGT--DCAF8 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FPGT^ENSG00000254685.7 | chr1:74201410:+ | DCAF8^ENSG00000132716.19 | chr1:160244034:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1118:50762:9505 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr1:85.98Mb]""]" | chr1:74201410-chr1:160244034 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| FOXP1--CORO1B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FOXP1^ENSG00000114861.23 | chr3:70972555:- | CORO1B^ENSG00000172725.14 | chr11:67438501:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1183:42841:17731 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr3--chr11]""]" | chr3:70972555-chr11:67438501 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| FOXN3--WWTR1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FOXN3^ENSG00000053254.16 | chr14:89411934:- | WWTR1^ENSG00000018408.15 | chr3:149542537:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1257:47032:7193 | . | YES_LDAS | 0.0034 | GT | 1.5628 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr14--chr3]""]" | chr14:89411934-chr3:149542537 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| FOXN3--LINC00272 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | FOXN3^ENSG00000053254.16 | chr14:89411934:- | LINC00272^ENSG00000203729.8 | chr1:182407950:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1279:1744:4755 | . | NO_LDAS | 0.0034 | GT | 1.5628 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr14--chr1]""]" | chr14:89411934-chr1:182407950 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| FOXK2--TBCD | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FOXK2^ENSG00000141568.21 | chr17:82587272:+ | TBCD^ENSG00000141556.21 | chr17:82905936:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2168:51619:13121 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.8062 | "[""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr17:0.11Mb]""]" | chr17:82587272-chr17:82905936 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| FN3K--CAPRIN1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | FN3K^ENSG00000167363.14 | chr17:82735617:+ | CAPRIN1^ENSG00000135387.21 | chr11:34052421:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1404:43189:10010 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr17--chr11]""]" | chr17:82735617-chr11:34052421 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| FKBP4P1--C1S | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | FKBP4P1^ENSG00000251463.2 | chr4:118194239:- | C1S^ENSG00000182326.15 | chr12:7066518:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2490:27438:3494 | . | NO_LDAS | 0.0034 | GC | 1.9329 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr4--chr12]""]" | chr4:118194239-chr12:7066518 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| FKBP15--TCF25 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | FKBP15^ENSG00000119321.9 | chr9:113169751:- | TCF25^ENSG00000141002.20 | chr16:89884582:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1351:52032:16021 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr9--chr16]""]" | chr9:113169751-chr16:89884582 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| FILIP1--ICA1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | FILIP1^ENSG00000118407.15 | chr6:75308840:- | ICA1^ENSG00000003147.19 | chr7:8157036:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1366:14923:24274 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr6--chr7]""]" | chr6:75308840-chr7:8157036 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| FGF14--MEIS2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FGF14^ENSG00000102466.16 | chr13:102401471:- | MEIS2^ENSG00000134138.20 | chr15:37036959:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1275:18183:26671 | . | YES_LDAS | 0.0034 | GT | 1.6895 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr13--chr15]""]" | chr13:102401471-chr15:37036959 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| FER--AC008588.1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FER^ENSG00000151422.13 | chr5:108835807:+ | AC008588.1^ENSG00000248634.1 | chr5:128742437:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1245:44759:22957 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr5:19.47Mb]""]" | chr5:108835807-chr5:128742437 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| FDXR--FAT1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | FDXR^ENSG00000161513.12 | chr17:74869950:- | FAT1^ENSG00000083857.14 | chr4:186663494:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1467:15408:14578 | . | NO_LDAS | 0.0034 | GT | 1.8323 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr17--chr4]""]" | chr17:74869950-chr4:186663494 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| FCHO2--SOS2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FCHO2^ENSG00000157107.14 | chr5:73041315:+ | SOS2^ENSG00000100485.12 | chr14:50140059:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1311:42914:1322 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr5--chr14]""]" | chr5:73041315-chr14:50140059 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| FBXO42--KIF1B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FBXO42^ENSG00000037637.11 | chr1:16352255:- | KIF1B^ENSG00000054523.18 | chr1:10323884:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1424:45341:27974 | . | NO_LDAS | 0.0034 | GT | 1.6402 | AG | 1.7968 | "[""INTRACHROMOSOMAL[chr1:5.87Mb]""]" | chr1:16352255-chr1:10323884 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| FBXO32--OSER1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FBXO32^ENSG00000156804.7 | chr8:123540899:- | OSER1^ENSG00000132823.11 | chr20:44206998:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1198:14219:14059 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr8--chr20]""]" | chr8:123540899-chr20:44206998 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| FBXO30-DT--FAM168A | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FBXO30-DT^ENSG00000235652.9 | chr6:145828456:+ | FAM168A^ENSG00000054965.11 | chr11:73430770:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1112:43650:8763 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr6--chr11]""]" | chr6:145828456-chr11:73430770 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| FBXL8--CYBC1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | FBXL8^ENSG00000135722.9 | chr16:67163840:+ | CYBC1^ENSG00000178927.18 | chr17:82445705:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1245:45058:15741 | . | YES_LDAS | 0.0034 | GT | 1.4716 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr16--chr17]""]" | chr16:67163840-chr17:82445705 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| FBXL4--RNF217 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FBXL4^ENSG00000112234.9 | chr6:98926477:- | RNF217^ENSG00000146373.16 | chr6:125045211:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1482:34517:20491 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr6:26.01Mb]""]" | chr6:98926477-chr6:125045211 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| FBN1--UBR2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | FBN1^ENSG00000166147.14 | chr15:48472602:- | UBR2^ENSG00000024048.11 | chr6:42564251:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1343:38441:26839 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.2729 | "[""INTERCHROMOSOMAL[chr15--chr6]""]" | chr15:48472602-chr6:42564251 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| FBH1--ZC3H3 | 1 | 0 | 0.25 | 0.0 | INCL_NON_REF_SPLICE | FBH1^ENSG00000134452.20 | chr10:5906232:+ | ZC3H3^ENSG00000014164.7 | chr8:143538242:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1356:9770:27259 | . | NO_LDAS | 0.0009 | GC | 1.7968 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr10--chr8]""]" | chr10:5906232-chr8:143538242 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| FAU--SFTA1P | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | FAU^ENSG00000149806.11 | chr11:65120977:- | SFTA1P^ENSG00000225383.8 | chr10:10794728:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1110:29550:1126 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.4566 | "[""INTERCHROMOSOMAL[chr11--chr10]""]" | chr11:65120977-chr10:10794728 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| FAU--MRGPRX4 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | FAU^ENSG00000149806.11 | chr11:65120729:- | MRGPRX4^ENSG00000179817.5 | chr11:18173087:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2158:19793:8244 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8295 | "[""INTRACHROMOSOMAL[chr11:46.95Mb]""]" | chr11:65120729-chr11:18173087 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| FATE1--TJAP1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | FATE1^ENSG00000147378.11 | chrX:151721951:+ | TJAP1^ENSG00000137221.14 | chr6:43503623:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1301:18838:26685 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chrX--chr6]""]" | chrX:151721951-chr6:43503623 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| FARSA--KRT18 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | FARSA^ENSG00000179115.11 | chr19:12930429:- | KRT18^ENSG00000111057.11 | chr12:52949833:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1451:12140:6395 | . | NO_LDAS | 0.0017 | GT | 1.7465 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr19--chr12]""]" | chr19:12930429-chr12:52949833 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| FARP2--TBC1D22A | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FARP2^ENSG00000006607.14 | chr2:241373290:+ | TBC1D22A^ENSG00000054611.14 | chr22:46997634:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1298:41215:14494 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr2--chr22]""]" | chr2:241373290-chr22:46997634 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| FAM83G--FAM87A | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | FAM83G^ENSG00000188522.15 | chr17:18971373:- | FAM87A^ENSG00000182366.10 | chr8:383701:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1327:8637:2485 | . | NO_LDAS | 0.0017 | GC | 1.4566 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chr17--chr8]""]" | chr17:18971373-chr8:383701 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| FAM81A--ETFA | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FAM81A^ENSG00000157470.12 | chr15:59460206:+ | ETFA^ENSG00000140374.16 | chr15:76295737:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1377:13208:3340 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr15:16.69Mb]""]" | chr15:59460206-chr15:76295737 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| FAM78B--RNF38 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | FAM78B^ENSG00000188859.7 | chr1:166166339:- | RNF38^ENSG00000137075.18 | chr9:36400940:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2232:43917:15755 | . | NO_LDAS | 0.0034 | GT | 1.3383 | AG | 1.2366 | "[""INTERCHROMOSOMAL[chr1--chr9]""]" | chr1:166166339-chr9:36400940 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| FAM78B--NT5DC2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | FAM78B^ENSG00000188859.7 | chr1:166166339:- | NT5DC2^ENSG00000168268.11 | chr3:52534216:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1149:26799:1995 | . | NO_LDAS | 0.0034 | GT | 1.3383 | AG | 1.5546 | "[""INTERCHROMOSOMAL[chr1--chr3]""]" | chr1:166166339-chr3:52534216 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| FAM25BP--AP003110.1 | 1 | 0 | 0.25 | 0.0 | ONLY_REF_SPLICE | FAM25BP^ENSG00000273225.4 | chr10:46371201:+ | AP003110.1^ENSG00000255084.1 | chr11:78555215:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2254:32300:12644 | . | YES_LDAS | 0.0009 | GT | 1.5628 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr10--chr11]""]" | chr10:46371201-chr11:78555215 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| FAM20A--BCAS3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FAM20A^ENSG00000108950.12 | chr17:68600263:- | BCAS3^ENSG00000141376.23 | chr17:60868576:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1385:20214:21276 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.6895 | "[""INTRACHROMOSOMAL[chr17:7.14Mb]""]" | chr17:68600263-chr17:60868576 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| FAM184B--PPFIA1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | FAM184B^ENSG00000047662.5 | chr4:17693389:- | PPFIA1^ENSG00000131626.19 | chr11:70333481:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1255:45900:1140 | . | NO_LDAS | 0.0034 | GT | 1.8323 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr4--chr11]""]" | chr4:17693389-chr11:70333481 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| FAM177A1--HECTD1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FAM177A1^ENSG00000151327.13 | chr14:35053451:+ | HECTD1^ENSG00000092148.13 | chr14:31150221:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1445:13192:26208 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.7465 | "[""INTRACHROMOSOMAL[chr14:3.84Mb]""]" | chr14:35053451-chr14:31150221 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| FAM174B--LINC01140 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | FAM174B^ENSG00000185442.13 | chr15:92655443:- | LINC01140^ENSG00000267272.5 | chr1:87165389:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2156:19882:17871 | . | NO_LDAS | 0.0017 | GT | 1.6895 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr15--chr1]""]" | chr15:92655443-chr1:87165389 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| FAM174B--CHD2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FAM174B^ENSG00000185442.13 | chr15:92809646:- | CHD2^ENSG00000173575.22 | chr15:92927244:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1268:22172:23153 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.5656 | "[""INTRACHROMOSOMAL[chr15:0.09Mb]"",""LOCAL_INVERSION:-:+:[90305]""]" | chr15:92809646-chr15:92927244 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| FAM171A2--DHX36 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | FAM171A2^ENSG00000161682.15 | chr17:44353529:- | DHX36^ENSG00000174953.14 | chr3:154324274:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1413:31880:21500 | . | NO_LDAS | 0.0017 | GT | 0.9056 | AG | 1.231 | "[""INTERCHROMOSOMAL[chr17--chr3]""]" | chr17:44353529-chr3:154324274 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| FAM168B--MBOAT2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FAM168B^ENSG00000152102.18 | chr2:131071855:- | MBOAT2^ENSG00000143797.12 | chr2:8958642:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1190:46166:19959 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr2:122.04Mb]""]" | chr2:131071855-chr2:8958642 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| FAM133B--CWF19L2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FAM133B^ENSG00000234545.8 | chr7:92590268:- | CWF19L2^ENSG00000152404.15 | chr11:107353736:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1240:16314:19062 | . | NO_LDAS | 0.0034 | GT | 1.8295 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr7--chr11]""]" | chr7:92590268-chr11:107353736 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| FAM120B--DCAF1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FAM120B^ENSG00000112584.14 | chr6:170358318:+ | DCAF1^ENSG00000145041.15 | chr3:51443903:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1239:39630:28338 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr6--chr3]""]" | chr6:170358318-chr3:51443903 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| FAM117B--TANC1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FAM117B^ENSG00000138439.12 | chr2:202696032:+ | TANC1^ENSG00000115183.15 | chr2:159065896:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1384:27673:13289 | . | NO_LDAS | 0.0034 | GT | 1.7465 | AG | 1.6729 | "[""INTRACHROMOSOMAL[chr2:43.40Mb]""]" | chr2:202696032-chr2:159065896 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| F11R--SCML2 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | F11R^ENSG00000158769.18 | chr1:161000224:- | SCML2^ENSG00000102098.19 | chrX:18260182:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2319:38449:12420 | . | NO_LDAS | 0.0017 | GT | 1.8062 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr1--chrX]""]" | chr1:161000224-chrX:18260182 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| F11R--LONP2 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | F11R^ENSG00000158769.18 | chr1:161000224:- | LONP2^ENSG00000102910.14 | chr16:48356178:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2319:38449:12420 | . | NO_LDAS | 0.0017 | GT | 1.8062 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr1--chr16]""]" | chr1:161000224-chr16:48356178 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| EXOSC7--PYCARD | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | EXOSC7^ENSG00000075914.13 | chr3:44975460:+ | PYCARD^ENSG00000103490.14 | chr16:31202411:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2125:40568:12504 | . | NO_LDAS | 0.0034 | GT | 1.1589 | AG | 1.1033 | "[""INTERCHROMOSOMAL[chr3--chr16]""]" | chr3:44975460-chr16:31202411 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| EXOC4--SDHAF3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | EXOC4^ENSG00000131558.15 | chr7:133630141:+ | SDHAF3^ENSG00000196636.8 | chr7:97181012:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1357:24898:8286 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr7:36.07Mb]""]" | chr7:133630141-chr7:97181012 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| EXD3--GALNS | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | EXD3^ENSG00000187609.16 | chr9:137423114:- | GALNS^ENSG00000141012.13 | chr16:88841971:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1376:18029:15951 | . | YES_LDAS | 0.0034 | GT | 1.5329 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr9--chr16]""]" | chr9:137423114-chr16:88841971 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| EVX2--FRMD4A | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | EVX2^ENSG00000174279.4 | chr2:176080277:- | FRMD4A^ENSG00000151474.23 | chr10:13656943:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2202:18984:18445 | . | NO_LDAS | 0.0034 | GT | 1.2419 | AG | 1.231 | "[""INTERCHROMOSOMAL[chr2--chr10]""]" | chr2:176080277-chr10:13656943 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| EVA1C--RAD23B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | EVA1C^ENSG00000166979.13 | chr21:32504015:+ | RAD23B^ENSG00000119318.13 | chr9:107300141:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1465:46757:3158 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr21--chr9]""]" | chr21:32504015-chr9:107300141 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| EVA1C--OAZ1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | EVA1C^ENSG00000166979.13 | chr21:32413013:+ | OAZ1^ENSG00000104904.12 | chr19:2271385:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1253:3306:27217 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr21--chr19]""]" | chr21:32413013-chr19:2271385 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| ETV6--AC112243.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ETV6^ENSG00000139083.11 | chr12:11752579:+ | AC112243.1^ENSG00000279460.1 | chr4:184988092:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1278:42647:16974 | . | NO_LDAS | 0.0034 | GT | 1.7465 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr12--chr4]""]" | chr12:11752579-chr4:184988092 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ETFDH--THADA | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ETFDH^ENSG00000171503.12 | chr4:158672490:+ | THADA^ENSG00000115970.19 | chr2:43556555:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1167:15246:12812 | . | NO_LDAS | 0.0034 | GT | 1.8256 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr4--chr2]""]" | chr4:158672490-chr2:43556555 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| ESYT2--PLVAP | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ESYT2^ENSG00000117868.17 | chr7:158739040:- | PLVAP^ENSG00000130300.9 | chr19:17351691:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1345:31766:20743 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.5546 | "[""INTERCHROMOSOMAL[chr7--chr19]""]" | chr7:158739040-chr19:17351691 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ESYT2--GNAO1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | ESYT2^ENSG00000117868.17 | chr7:158829069:- | GNAO1^ENSG00000087258.16 | chr16:56347464:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1180:31135:4461 | . | NO_LDAS | 0.0017 | GT | 1.7232 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr7--chr16]""]" | chr7:158829069-chr16:56347464 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ESYT2--AC026887.1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | ESYT2^ENSG00000117868.17 | chr7:158829069:- | AC026887.1^ENSG00000280086.1 | chr10:11397123:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1180:31135:4461 | . | NO_LDAS | 0.0017 | GT | 1.7232 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr7--chr10]""]" | chr7:158829069-chr10:11397123 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ERI3--NFYC | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ERI3^ENSG00000117419.16 | chr1:44284835:- | NFYC^ENSG00000066136.20 | chr1:40747534:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2425:27826:11341 | . | YES_LDAS | 0.0034 | GT | 1.6402 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr1:3.45Mb]""]" | chr1:44284835-chr1:40747534 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| ERGIC3--SMC3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ERGIC3^ENSG00000125991.20 | chr20:35542223:+ | SMC3^ENSG00000108055.10 | chr10:110567706:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2345:12933:12504 | . | NO_LDAS | 0.0034 | GT | 1.3753 | AG | 1.3383 | "[""INTERCHROMOSOMAL[chr20--chr10]""]" | chr20:35542223-chr10:110567706 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ERGIC3--SMARCD2 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | ERGIC3^ENSG00000125991.20 | chr20:35542223:+ | SMARCD2^ENSG00000108604.16 | chr17:63842529:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1333:36402:14704 | . | NO_LDAS | 0.0017 | GT | 1.3753 | AG | 1.3753 | "[""INTERCHROMOSOMAL[chr20--chr17]""]" | chr20:35542223-chr17:63842529 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ERBB3--TOB1-AS1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ERBB3^ENSG00000065361.16 | chr12:56097940:+ | TOB1-AS1^ENSG00000229980.5 | chr17:50908836:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2277:20918:15965 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr12--chr17]""]" | chr12:56097940-chr17:50908836 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| ERBB3--SRRM1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ERBB3^ENSG00000065361.16 | chr12:56101102:+ | SRRM1^ENSG00000133226.17 | chr1:24669513:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2292:3346:29473 | . | NO_LDAS | 0.0034 | GT | 1.6402 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr12--chr1]""]" | chr12:56101102-chr1:24669513 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| EPS8--ATF7IP | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | EPS8^ENSG00000151491.14 | chr12:15789161:- | ATF7IP^ENSG00000171681.12 | chr12:14423909:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1155:18976:17086 | . | NO_LDAS | 0.0034 | GT | 1.6729 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr12:1.12Mb]""]" | chr12:15789161-chr12:14423909 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| EPS15--ZNF362 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | EPS15^ENSG00000085832.17 | chr1:51519199:- | ZNF362^ENSG00000160094.15 | chr1:33281587:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1225:49653:9688 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr1:18.05Mb]""]" | chr1:51519199-chr1:33281587 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| EPS15--TCERG1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | EPS15^ENSG00000085832.17 | chr1:51519199:- | TCERG1^ENSG00000113649.12 | chr5:146463551:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1457:30027:16470 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.2867 | "[""INTERCHROMOSOMAL[chr1--chr5]""]" | chr1:51519199-chr5:146463551 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| EPS15--PPIA | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | EPS15^ENSG00000085832.17 | chr1:51403419:- | PPIA^ENSG00000196262.15 | chr7:44801287:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2398:43934:26012 | . | YES_LDAS | 0.0034 | GT | 1.7232 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr1--chr7]""]" | chr1:51403419-chr7:44801287 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| EPB41L1--TNFRSF14-AS1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | EPB41L1^ENSG00000088367.23 | chr20:36190374:+ | TNFRSF14-AS1^ENSG00000238164.6 | chr1:2550651:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2293:23296:27315 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr20--chr1]""]" | chr20:36190374-chr1:2550651 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ENPP7--AC005838.1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | ENPP7^ENSG00000182156.10 | chr17:79739528:+ | AC005838.1^ENSG00000223544.1 | chr17:15588852:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1125:16242:5484 | . | NO_LDAS | 0.0017 | GT | 1.8062 | AG | 1.8256 | "[""INTRACHROMOSOMAL[chr17:64.14Mb]""]" | chr17:79739528-chr17:15588852 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| EMX2--ROR1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | EMX2^ENSG00000170370.12 | chr10:117543445:+ | ROR1^ENSG00000185483.12 | chr1:63774055:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2451:21015:6493 | . | NO_LDAS | 0.0034 | GT | 0.9183 | AG | 1.1589 | "[""INTERCHROMOSOMAL[chr10--chr1]""]" | chr10:117543445-chr1:63774055 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| EML4--KLHL24 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | EML4^ENSG00000143924.19 | chr2:42256630:+ | KLHL24^ENSG00000114796.16 | chr3:183644086:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1331:8653:8623 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr2--chr3]""]" | chr2:42256630-chr3:183644086 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| ELN--COQ3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ELN^ENSG00000049540.18 | chr7:74036584:+ | COQ3^ENSG00000132423.12 | chr6:99394130:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2153:6525:14886 | . | NO_LDAS | 0.0034 | GT | 1.8295 | AG | 1.6729 | "[""INTERCHROMOSOMAL[chr7--chr6]""]" | chr7:74036584-chr6:99394130 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ELF2--CDK11B | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ELF2^ENSG00000109381.20 | chr4:139084421:- | CDK11B^ENSG00000248333.9 | chr1:1646169:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2235:19437:16988 | . | NO_LDAS | 0.0034 | GC | 1.2419 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr4--chr1]""]" | chr4:139084421-chr1:1646169 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| EIF4H--TTTY13 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | EIF4H^ENSG00000106682.16 | chr7:74194878:+ | TTTY13^ENSG00000184991.3 | chrY:21566118:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1347:49419:3816 | . | NO_LDAS | 0.0017 | GT | 1.5301 | AG | 1.4256 | "[""INTERCHROMOSOMAL[chr7--chrY]""]" | chr7:74194878-chrY:21566118 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 1 | |||
| EIF4E3--ZBTB20 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | EIF4E3^ENSG00000163412.13 | chr3:71710412:- | ZBTB20^ENSG00000181722.17 | chr3:114500391:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1391:46846:6030 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr3:42.56Mb]""]" | chr3:71710412-chr3:114500391 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| EIF4A1--EIF4A2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | EIF4A1^ENSG00000161960.16 | chr17:7574308:+ | EIF4A2^ENSG00000156976.17 | chr3:186784564:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1472:36645:12238 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8323 | "[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr17--chr3]""]" | chr17:7574308-chr3:186784564 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 |
| EIF3D--AC013268.4 | 1 | 0 | 0.25 | 0.0 | INCL_NON_REF_SPLICE | EIF3D^ENSG00000100353.18 | chr22:36512486:- | AC013268.4^ENSG00000283283.2 | chr2:110025091:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1168:39581:9169 | . | NO_LDAS | 0.0009 | GC | 1.5058 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr22--chr2]""]" | chr22:36512486-chr2:110025091 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| EHD1--ZMYM3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | EHD1^ENSG00000110047.18 | chr11:64853897:- | ZMYM3^ENSG00000147130.14 | chrX:71255141:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1121:38028:7964 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 0.9968 | "[""INTERCHROMOSOMAL[chr11--chrX]""]" | chr11:64853897-chrX:71255141 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| EFNB1--DUBR | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | EFNB1^ENSG00000090776.6 | chrX:68840286:+ | DUBR^ENSG00000243701.7 | chr3:107249215:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1325:25141:24737 | . | NO_LDAS | 0.0034 | GC | 1.7232 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chrX--chr3]""]" | chrX:68840286-chr3:107249215 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| EFNA4--RPGR | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | EFNA4^ENSG00000243364.8 | chr1:155068955:+ | RPGR^ENSG00000156313.15 | chrX:38286087:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2240:26208:25662 | . | NO_LDAS | 0.0034 | GC | 1.7968 | AG | 0.9183 | "[""INTERCHROMOSOMAL[chr1--chrX]""]" | chr1:155068955-chrX:38286087 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| EFCAB14--ATPAF1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | EFCAB14^ENSG00000159658.15 | chr1:46683300:- | ATPAF1^ENSG00000123472.12 | chr1:46665364:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1151:5441:1518 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr1:0.00Mb]"",""NEIGHBORS[792]""]" | chr1:46683300-chr1:46665364 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | ||||
| EEF1A1P16--ATP5F1B | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | EEF1A1P16^ENSG00000213235.3 | chr12:16992010:+ | ATP5F1B^ENSG00000110955.9 | chr12:56645199:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2207:7901:19230 | . | NO_LDAS | 0.0017 | GT | 1.8295 | AG | 1.7056 | "[""INTRACHROMOSOMAL[chr12:39.65Mb]""]" | chr12:16992010-chr12:56645199 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| EDF1--RER1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | EDF1^ENSG00000107223.13 | chr9:136863288:- | RER1^ENSG00000157916.20 | chr1:2395784:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1353:14826:14186 | . | NO_LDAS | 0.0034 | GT | 1.8256 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr9--chr1]""]" | chr9:136863288-chr1:2395784 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| EDF1--PLP2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | EDF1^ENSG00000107223.13 | chr9:136866181:- | PLP2^ENSG00000102007.11 | chrX:49174335:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1392:31499:11313 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr9--chrX]""]" | chr9:136866181-chrX:49174335 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| EDEM1--HTR3C2P | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | EDEM1^ENSG00000134109.11 | chr3:5213501:+ | HTR3C2P^ENSG00000233576.1 | chr3:184078184:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1333:47105:6423 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.7465 | "[""INTRACHROMOSOMAL[chr3:178.86Mb]""]" | chr3:5213501-chr3:184078184 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| EDA--PHLDB2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | EDA^ENSG00000158813.18 | chrX:69957278:+ | PHLDB2^ENSG00000144824.21 | chr3:111913319:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2154:39258:14438 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chrX--chr3]""]" | chrX:69957278-chr3:111913319 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ECSIT--AP001462.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ECSIT^ENSG00000130159.14 | chr19:11507991:- | AP001462.1^ENSG00000269038.1 | chr11:64778947:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1304:13685:11033 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr19--chr11]""]" | chr19:11507991-chr11:64778947 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| EBF3--EBF1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | EBF3^ENSG00000108001.15 | chr10:129877768:- | EBF1^ENSG00000164330.17 | chr5:158823317:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1458:6962:9281 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr10--chr5]""]" | chr10:129877768-chr5:158823317 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| EBF1--EBF2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | EBF1^ENSG00000164330.17 | chr5:158823176:- | EBF2^ENSG00000221818.9 | chr8:25887972:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1334:11234:21920 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.6729 | "[""INTERCHROMOSOMAL[chr5--chr8]""]" | chr5:158823176-chr8:25887972 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| DYRK1A--PLEKHM3 | 1 | 0 | 0.17 | 0.0 | ONLY_REF_SPLICE | DYRK1A^ENSG00000157540.22 | chr21:37428908:+ | PLEKHM3^ENSG00000178385.15 | chr2:207908577:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1285:16654:7095 | . | NO_LDAS | 0.0006 | GT | 1.8892 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr21--chr2]""]" | chr21:37428908-chr2:207908577 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| DYNC2I1--CEP295 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DYNC2I1^ENSG00000126870.16 | chr7:158906091:+ | CEP295^ENSG00000166004.15 | chr11:93723077:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1196:4438:7292 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr7--chr11]""]" | chr7:158906091-chr11:93723077 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| DUXAP10--AS3MT | 1 | 0 | 0.17 | 0.0 | INCL_NON_REF_SPLICE | DUXAP10^ENSG00000244306.11 | chr14:19303402:- | AS3MT^ENSG00000214435.8 | chr10:102869591:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2142:6259:22747 | . | NO_LDAS | 0.0006 | GT | 1.1033 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr14--chr10]""]" | chr14:19303402-chr10:102869591 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| DUXAP10--AS3MT | 1 | 0 | 0.17 | 0.0 | INCL_NON_REF_SPLICE | DUXAP10^ENSG00000244306.11 | chr14:19303402:- | AS3MT^ENSG00000214435.8 | chr10:102869555:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2142:6259:22747 | . | NO_LDAS | 0.0006 | GT | 1.1033 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr14--chr10]""]" | chr14:19303402-chr10:102869555 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| DUXAP10--AS3MT | 1 | 0 | 0.17 | 0.0 | INCL_NON_REF_SPLICE | DUXAP10^ENSG00000244306.11 | chr14:19303402:- | AS3MT^ENSG00000214435.8 | chr10:102869519:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2142:6259:22747 | . | NO_LDAS | 0.0006 | GT | 1.1033 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr14--chr10]""]" | chr14:19303402-chr10:102869519 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| DUT--DUTP7 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DUT^ENSG00000128951.14 | chr15:48336090:+ | DUTP7^ENSG00000250473.1 | chr4:51865247:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1487:8774:3312 | . | NO_LDAS | 0.0034 | GT | 1.5656 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr15--chr4]""]" | chr15:48336090-chr4:51865247 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| DUSP16--SPAG9 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | DUSP16^ENSG00000111266.9 | chr12:12500519:- | SPAG9^ENSG00000008294.21 | chr17:50966387:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1230:30367:17927 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.4566 | "[""INTERCHROMOSOMAL[chr12--chr17]""]" | chr12:12500519-chr17:50966387 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| DUS4L--NDUFS7 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DUS4L^ENSG00000105865.11 | chr7:107563557:+ | NDUFS7^ENSG00000115286.20 | chr19:1395194:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1405:47048:9800 | . | NO_LDAS | 0.0034 | GT | 0.6998 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr7--chr19]""]" | chr7:107563557-chr19:1395194 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| DTX2P1--DTX1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DTX2P1^ENSG00000186704.9 | chr7:77003365:+ | DTX1^ENSG00000135144.7 | chr12:113095325:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1338:43448:17689 | . | NO_LDAS | 0.0034 | GT | 1.5628 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr7--chr12]""]" | chr7:77003365-chr12:113095325 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| DSEL--SERBP1 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | DSEL^ENSG00000171451.14 | chr18:67516630:- | SERBP1^ENSG00000142864.15 | chr1:67430046:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2493:20481:22131 | . | NO_LDAS | 0.0011 | GT | 1.231 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr18--chr1]""]" | chr18:67516630-chr1:67430046 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| DSC3--PPP2R5A | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | DSC3^ENSG00000134762.17 | chr18:31001618:- | PPP2R5A^ENSG00000066027.12 | chr1:212356626:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1323:7189:25732 | . | NO_LDAS | 0.0034 | GT | 1.6895 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr18--chr1]""]" | chr18:31001618-chr1:212356626 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| DRC3--AP3D1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DRC3^ENSG00000171962.18 | chr17:18005929:+ | AP3D1^ENSG00000065000.19 | chr19:2112956:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1439:36232:29599 | . | NO_LDAS | 0.0034 | GT | 1.7465 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr17--chr19]""]" | chr17:18005929-chr19:2112956 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| DPYS--YTHDC1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | DPYS^ENSG00000147647.13 | chr8:104330314:- | YTHDC1^ENSG00000083896.13 | chr4:68337221:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1265:26532:3522 | . | NO_LDAS | 0.0017 | GT | 1.5546 | AG | 0.971 | "[""INTERCHROMOSOMAL[chr8--chr4]""]" | chr8:104330314-chr4:68337221 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| DPP9--THY1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DPP9^ENSG00000142002.18 | chr19:4679835:- | THY1^ENSG00000154096.14 | chr11:119417999:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1391:11509:26292 | . | NO_LDAS | 0.0034 | GT | 1.8295 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr19--chr11]""]" | chr19:4679835-chr11:119417999 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| DPP4--FAP | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | DPP4^ENSG00000197635.11 | chr2:161994961:- | FAP^ENSG00000078098.14 | chr2:162171080:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2257:3524:7866 | . | NO_LDAS | 0.0034 | GT | 1.9899 | AG | 1.9899 | "[""INTRACHROMOSOMAL[chr2:0.10Mb]"",""LOCAL_REARRANGEMENT:-:[96290]""]" | chr2:161994961-chr2:162171080 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| DOCK4--JAK2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | DOCK4^ENSG00000128512.23 | chr7:112206102:- | JAK2^ENSG00000096968.14 | chr9:5021963:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1425:50511:13667 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr7--chr9]""]" | chr7:112206102-chr9:5021963 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| DNTTIP1--TNNC2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | DNTTIP1^ENSG00000101457.13 | chr20:45795443:+ | TNNC2^ENSG00000101470.10 | chr20:45824834:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1108:46806:20001 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8256 | "[""INTRACHROMOSOMAL[chr20:0.01Mb]"",""LOCAL_INVERSION:+:-:[11787]""]" | chr20:45795443-chr20:45824834 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| DNAJC7--SYTL5 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DNAJC7^ENSG00000168259.17 | chr17:41983976:- | SYTL5^ENSG00000147041.12 | chrX:38120358:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1172:19437:8861 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr17--chrX]""]" | chr17:41983976-chrX:38120358 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| DNAJC25--GNG10 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | DNAJC25^ENSG00000059769.20 | chr9:111631743:+ | GNG10^ENSG00000242616.4 | chr9:111666815:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1139:12633:24877 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9329 | "[""ChimerSeq"",""INTRACHROMOSOMAL[chr9:0.01Mb]"",""NEIGHBORS[7254]""]" | chr9:111631743-chr9:111666815 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| DNAJC11--FLI1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DNAJC11^ENSG00000007923.16 | chr1:6667770:- | FLI1^ENSG00000151702.17 | chr11:128693949:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1445:51651:9113 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 0.9968 | "[""INTERCHROMOSOMAL[chr1--chr11]""]" | chr1:6667770-chr11:128693949 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| DNAJB6--PRSS57 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DNAJB6^ENSG00000105993.15 | chr7:157410501:+ | PRSS57^ENSG00000185198.12 | chr19:685773:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1211:39775:28142 | . | NO_LDAS | 0.0034 | GT | 0.9056 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr7--chr19]""]" | chr7:157410501-chr19:685773 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| DNAJB14--SELENOI | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | DNAJB14^ENSG00000164031.17 | chr4:99946439:- | SELENOI^ENSG00000138018.18 | chr2:26364302:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2202:4770:15937 | . | YES_LDAS | 0.0034 | GT | 1.3996 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr4--chr2]""]" | chr4:99946439-chr2:26364302 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| DNAH7--BLNK | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DNAH7^ENSG00000118997.14 | chr2:195905085:- | BLNK^ENSG00000095585.17 | chr10:96209897:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1358:10392:24387 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr2--chr10]""]" | chr2:195905085-chr10:96209897 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| DMXL1--SPDL1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | DMXL1^ENSG00000172869.14 | chr5:119116336:+ | SPDL1^ENSG00000040275.17 | chr5:169591048:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1120:11776:1140 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.6729 | "[""INTRACHROMOSOMAL[chr5:50.33Mb]""]" | chr5:119116336-chr5:169591048 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| DMPK--PRKCZ | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DMPK^ENSG00000104936.19 | chr19:45777754:- | PRKCZ^ENSG00000067606.17 | chr1:2173927:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1318:42801:13849 | . | NO_LDAS | 0.0034 | GT | 1.3383 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr19--chr1]""]" | chr19:45777754-chr1:2173927 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| DMD--TOPAZ1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DMD^ENSG00000198947.17 | chrX:31203957:- | TOPAZ1^ENSG00000173769.4 | chr3:44243697:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1125:3298:15545 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chrX--chr3]""]" | chrX:31203957-chr3:44243697 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| DMD--CPXM2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DMD^ENSG00000198947.17 | chrX:33020139:- | CPXM2^ENSG00000121898.13 | chr10:123746838:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2157:50422:26236 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chrX--chr10]""]" | chrX:33020139-chr10:123746838 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 1 | |||
| DLK2--SERINC2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | DLK2^ENSG00000171462.15 | chr6:43455987:- | SERINC2^ENSG00000168528.12 | chr1:31432967:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1125:38934:27049 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr6--chr1]""]" | chr6:43455987-chr1:31432967 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| DLG5--ABCC8 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DLG5^ENSG00000151208.17 | chr10:77820183:- | ABCC8^ENSG00000006071.15 | chr11:17399104:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2313:7739:24274 | . | NO_LDAS | 0.0034 | GT | 1.1033 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr10--chr11]""]" | chr10:77820183-chr11:17399104 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| DLG1--DSTN | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | DLG1^ENSG00000075711.21 | chr3:197161640:- | DSTN^ENSG00000125868.16 | chr20:17600738:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1152:27309:26699 | . | YES_LDAS | 0.0034 | GT | 1.5329 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr3--chr20]""]" | chr3:197161640-chr20:17600738 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| DKK3--SPTLC2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DKK3^ENSG00000050165.18 | chr11:12009354:- | SPTLC2^ENSG00000100596.7 | chr14:77616650:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1279:25124:2345 | . | NO_LDAS | 0.0034 | GT | 1.6729 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr11--chr14]""]" | chr11:12009354-chr14:77616650 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| DKC1--GOLGA8CP | 1 | 0 | 0.17 | 0.0 | INCL_NON_REF_SPLICE | DKC1^ENSG00000130826.18 | chrX:154776205:+ | GOLGA8CP^ENSG00000181984.11 | chr15:20574018:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1168:8208:10458 | . | NO_LDAS | 0.0006 | GT | 1.5628 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chrX--chr15]""]" | chrX:154776205-chr15:20574018 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| DKC1--AL161935.3 | 1 | 0 | 0.17 | 0.0 | INCL_NON_REF_SPLICE | DKC1^ENSG00000130826.18 | chrX:154776205:+ | AL161935.3^ENSG00000286694.1 | chr10:31608788:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1168:8208:10458 | . | NO_LDAS | 0.0006 | GT | 1.5628 | AG | 1.5628 | "[""INTERCHROMOSOMAL[chrX--chr10]""]" | chrX:154776205-chr10:31608788 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| DIP2B--SMG6 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | DIP2B^ENSG00000066084.13 | chr12:50505240:+ | SMG6^ENSG00000070366.14 | chr17:2068931:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1216:1890:2709 | . | NO_LDAS | 0.0034 | GT | 1.8295 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr12--chr17]""]" | chr12:50505240-chr17:2068931 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| DIP2B--FBXO24 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DIP2B^ENSG00000066084.13 | chr12:50675451:+ | FBXO24^ENSG00000106336.13 | chr7:100600720:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2143:41264:10767 | . | NO_LDAS | 0.0034 | GT | 1.5656 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr12--chr7]""]" | chr12:50675451-chr7:100600720 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| DIDO1--ATP5F1A | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DIDO1^ENSG00000101191.17 | chr20:62907143:- | ATP5F1A^ENSG00000152234.16 | chr18:46088108:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1331:4115:20855 | . | NO_LDAS | 0.0034 | GT | 1.8295 | AG | 1.3996 | "[""INTERCHROMOSOMAL[chr20--chr18]""]" | chr20:62907143-chr18:46088108 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| DIAPH2--SH3KBP1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | DIAPH2^ENSG00000147202.18 | chrX:96685190:+ | SH3KBP1^ENSG00000147010.18 | chrX:19595000:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1140:15732:12728 | . | YES_LDAS | 0.0034 | GT | 1.6402 | AG | 1.5058 | "[""INTRACHROMOSOMAL[chrX:76.80Mb]""]" | chrX:96685190-chrX:19595000 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| DIAPH2--DMD | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | DIAPH2^ENSG00000147202.18 | chrX:97429745:+ | DMD^ENSG00000198947.17 | chrX:32645152:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1117:44176:1967 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chrX:63.35Mb]""]" | chrX:97429745-chrX:32645152 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| DIABLO--PBX4 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | DIABLO^ENSG00000184047.20 | chr12:122220530:- | PBX4^ENSG00000105717.14 | chr19:19599365:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1134:46862:13429 | . | NO_LDAS | 0.0017 | GT | 1.9329 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr12--chr19]""]" | chr12:122220530-chr19:19599365 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| DESI2--ADSS2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | DESI2^ENSG00000121644.19 | chr1:244653355:+ | ADSS2^ENSG00000035687.10 | chr1:244437768:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1113:19914:9099 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr1:0.20Mb]""]" | chr1:244653355-chr1:244437768 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| DEPDC1--COL4A5 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | DEPDC1^ENSG00000024526.17 | chr1:68482411:- | COL4A5^ENSG00000188153.14 | chrX:108582884:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2252:34638:23195 | . | NO_LDAS | 0.0011 | GT | 1.8892 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chr1--chrX]""]" | chr1:68482411-chrX:108582884 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| DENND3--PTGR2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DENND3^ENSG00000105339.11 | chr8:141136791:+ | PTGR2^ENSG00000140043.11 | chr14:73886783:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1133:19356:29403 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.231 | "[""INTERCHROMOSOMAL[chr8--chr14]""]" | chr8:141136791-chr14:73886783 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| DENND2A--SNX19 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DENND2A^ENSG00000146966.13 | chr7:140673985:- | SNX19^ENSG00000120451.11 | chr11:130906130:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2438:30512:17815 | . | NO_LDAS | 0.0034 | GT | 1.8295 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr7--chr11]""]" | chr7:140673985-chr11:130906130 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| DEGS1--SLF2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | DEGS1^ENSG00000143753.13 | chr1:224183418:+ | SLF2^ENSG00000119906.13 | chr10:100915999:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1255:32114:22663 | . | NO_LDAS | 0.0034 | GT | 1.7968 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr1--chr10]""]" | chr1:224183418-chr10:100915999 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| DDX46--CAMLG | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | DDX46^ENSG00000145833.16 | chr5:134764092:+ | CAMLG^ENSG00000164615.6 | chr5:134741063:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1217:34096:22565 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.3753 | "[""DEEPEST2019"",""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr5:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[6614]""]" | chr5:134764092-chr5:134741063 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| DDX41--PLA2R1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DDX41^ENSG00000183258.12 | chr5:177516119:- | PLA2R1^ENSG00000153246.13 | chr2:159937896:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1278:35035:1070 | . | NO_LDAS | 0.0034 | GT | 1.7968 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr5--chr2]""]" | chr5:177516119-chr2:159937896 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| DDX39B--AL360270.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DDX39B^ENSG00000198563.14 | chr6:31538763:- | AL360270.1^ENSG00000232811.1 | chr1:110944890:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2312:40884:19412 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.053 | "[""INTERCHROMOSOMAL[chr6--chr1]""]" | chr6:31538763-chr1:110944890 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| DDX19A--CDS2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DDX19A^ENSG00000168872.17 | chr16:70364645:+ | CDS2^ENSG00000101290.14 | chr20:5197411:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2468:40139:4307 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr16--chr20]""]" | chr16:70364645-chr20:5197411 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| DDX1--PNPT1 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | DDX1^ENSG00000079785.16 | chr2:15602631:+ | PNPT1^ENSG00000138035.15 | chr2:55644720:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1437:9939:14242 | . | YES_LDAS | 0.0017 | GT | 1.4566 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr2:40.00Mb]""]" | chr2:15602631-chr2:55644720 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| DDHD1--HNRNPM | 1 | 0 | 0.09 | 0.0 | INCL_NON_REF_SPLICE | DDHD1^ENSG00000100523.16 | chr14:53153172:- | HNRNPM^ENSG00000099783.12 | chr19:8445029:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1311:45988:9786 | . | NO_LDAS | 0.0003 | GT | 1.2419 | AG | 1.5546 | "[""INTERCHROMOSOMAL[chr14--chr19]""]" | chr14:53153172-chr19:8445029 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| DDA1--SKIL | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | DDA1^ENSG00000130311.11 | chr19:17309657:+ | SKIL^ENSG00000136603.14 | chr3:170359699:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2489:12617:27820 | . | YES_LDAS | 0.0034 | GT | 1.5329 | AG | 1.3383 | "[""INTERCHROMOSOMAL[chr19--chr3]""]" | chr19:17309657-chr3:170359699 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| DCUN1D2--TRAP1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | DCUN1D2^ENSG00000150401.15 | chr13:113490667:- | TRAP1^ENSG00000126602.11 | chr16:3690985:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1246:39104:5932 | . | YES_LDAS | 0.0034 | GT | 1.4256 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr13--chr16]""]" | chr13:113490667-chr16:3690985 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| DCP2--ZNF347 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DCP2^ENSG00000172795.17 | chr5:113021076:+ | ZNF347^ENSG00000197937.13 | chr19:53142309:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2248:20109:25325 | . | NO_LDAS | 0.0034 | GT | 1.5546 | AG | 1.5546 | "[""INTERCHROMOSOMAL[chr5--chr19]""]" | chr5:113021076-chr19:53142309 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| DCHS2--PDGFC | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | DCHS2^ENSG00000197410.14 | chr4:154489304:- | PDGFC^ENSG00000145431.11 | chr4:156861489:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1137:24526:23083 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr4:2.27Mb]""]" | chr4:154489304-chr4:156861489 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| DCAF10--SPECC1L | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | DCAF10^ENSG00000122741.16 | chr9:37819401:+ | SPECC1L^ENSG00000100014.20 | chr22:24302195:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2176:12585:7053 | . | YES_LDAS | 0.0034 | GT | 1.6895 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr9--chr22]""]" | chr9:37819401-chr22:24302195 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| DBP--TRAK1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DBP^ENSG00000105516.11 | chr19:48635580:- | TRAK1^ENSG00000182606.17 | chr3:42210096:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2286:9810:7207 | . | NO_LDAS | 0.0034 | GT | 1.4295 | AG | 0.9183 | "[""INTERCHROMOSOMAL[chr19--chr3]""]" | chr19:48635580-chr3:42210096 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| DACT1--AC138028.2 | 1 | 0 | 0.14 | 0.0 | INCL_NON_REF_SPLICE | DACT1^ENSG00000165617.15 | chr14:58646593:+ | AC138028.2^ENSG00000224888.4 | chr16:88738176:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1465:32705:21192 | . | NO_LDAS | 0.0005 | GC | 1.2419 | AG | 1.5546 | "[""INTERCHROMOSOMAL[chr14--chr16]""]" | chr14:58646593-chr16:88738176 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| DAB2--SNAP23 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | DAB2^ENSG00000153071.15 | chr5:39390444:- | SNAP23^ENSG00000092531.10 | chr15:42515237:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1247:2084:23840 | . | NO_LDAS | 0.0034 | GT | 1.5301 | AG | 1.5329 | "[""INTERCHROMOSOMAL[chr5--chr15]""]" | chr5:39390444-chr15:42515237 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| DAAM1--ABHD12B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | DAAM1^ENSG00000100592.16 | chr14:59325730:+ | ABHD12B^ENSG00000131969.15 | chr14:50888824:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2427:3427:25381 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr14:8.28Mb]""]" | chr14:59325730-chr14:50888824 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| CYP4F22--CYP4F8 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CYP4F22^ENSG00000171954.13 | chr19:15550756:+ | CYP4F8^ENSG00000186526.13 | chr19:15629193:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2466:24008:9800 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9329 | "[""DGD_PARALOGS"",""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr19:0.06Mb]"",""NEIGHBORS[62901]""]" | chr19:15550756-chr19:15629193 | False | 0 | Excluded | annotation | pattern: | DGD_PARALOGS | FAIL | 1 | |||
| CYP27B1--MMP2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CYP27B1^ENSG00000111012.10 | chr12:57762987:- | MMP2^ENSG00000087245.13 | chr16:55491801:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1154:38885:23153 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr12--chr16]""]" | chr12:57762987-chr16:55491801 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| CYP20A1--SPECC1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CYP20A1^ENSG00000119004.16 | chr2:203245895:+ | SPECC1^ENSG00000128487.18 | chr17:20315855:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1188:37324:9155 | . | NO_LDAS | 0.0034 | GT | 1.7232 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr2--chr17]""]" | chr2:203245895-chr17:20315855 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 1 | |||
| CUX1--MACROH2A2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CUX1^ENSG00000257923.12 | chr7:102170554:+ | MACROH2A2^ENSG00000099284.15 | chr10:70097342:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1457:35836:15236 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.4716 | "[""INTERCHROMOSOMAL[chr7--chr10]""]" | chr7:102170554-chr10:70097342 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| CTTN--VEGFA | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CTTN^ENSG00000085733.16 | chr11:70435867:+ | VEGFA^ENSG00000112715.25 | chr6:43771177:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1312:30375:19819 | . | NO_LDAS | 0.0034 | GC | 1.4566 | AG | 1.3996 | "[""INTERCHROMOSOMAL[chr11--chr6]""]" | chr11:70435867-chr6:43771177 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| CTSC--RAB38 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CTSC^ENSG00000109861.17 | chr11:88300530:- | RAB38^ENSG00000123892.12 | chr11:88149955:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2185:14357:18669 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8062 | "[""GTEx_recurrent_StarF2019"",""Babiceanu_Normal"",""ChimerSeq"",""Greger_Normal"",""INTRACHROMOSOMAL[chr11:0.09Mb]"",""NEIGHBORS[89626]""]" | chr11:88300530-chr11:88149955 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | ||||
| CTDSPL2--AOPEP | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CTDSPL2^ENSG00000137770.14 | chr15:44528173:+ | AOPEP^ENSG00000148120.17 | chr9:95005091:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1249:13548:10066 | . | NO_LDAS | 0.0034 | GT | 1.4295 | AG | 1.1589 | "[""INTERCHROMOSOMAL[chr15--chr9]""]" | chr15:44528173-chr9:95005091 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| CTDSPL--XRN1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CTDSPL^ENSG00000144677.15 | chr3:37862278:+ | XRN1^ENSG00000114127.11 | chr3:142432893:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1152:23887:7263 | . | NO_LDAS | 0.0034 | GT | 1.4566 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr3:104.32Mb]""]" | chr3:37862278-chr3:142432893 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| CTDSP1--DNM3OS | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CTDSP1^ENSG00000144579.8 | chr2:218402405:+ | DNM3OS^ENSG00000230630.5 | chr1:172144437:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1169:33465:14382 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.9656 | "[""GTEx_recurrent_StarF2019"",""INTERCHROMOSOMAL[chr2--chr1]""]" | chr2:218402405-chr1:172144437 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 |
| CTCF--PBX4 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | CTCF^ENSG00000102974.16 | chr16:67635632:+ | PBX4^ENSG00000105717.14 | chr19:19599365:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1134:46862:13429 | . | NO_LDAS | 0.0017 | GT | 1.9329 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr16--chr19]""]" | chr16:67635632-chr19:19599365 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| CSRNP2--AC124319.1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | CSRNP2^ENSG00000110925.7 | chr12:51083229:- | AC124319.1^ENSG00000262979.1 | chr17:80316556:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1189:40584:22537 | . | NO_LDAS | 0.0017 | GT | 1.6049 | AG | 1.5058 | "[""INTERCHROMOSOMAL[chr12--chr17]""]" | chr12:51083229-chr17:80316556 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| CSNK1G2--CSNK1G3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CSNK1G2^ENSG00000133275.16 | chr19:1969959:+ | CSNK1G3^ENSG00000151292.17 | chr5:123553107:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1127:40487:27890 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr19--chr5]""]" | chr19:1969959-chr5:123553107 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| CSK--RAP2CP1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CSK^ENSG00000103653.16 | chr15:74802665:+ | RAP2CP1^ENSG00000270938.1 | chr14:103279602:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1244:8645:10262 | . | NO_LDAS | 0.0034 | GT | 1.2366 | AG | 1.5058 | "[""INTERCHROMOSOMAL[chr15--chr14]""]" | chr15:74802665-chr14:103279602 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| CSAD--NODAL | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CSAD^ENSG00000139631.19 | chr12:53159887:- | NODAL^ENSG00000156574.10 | chr10:70432203:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2129:11218:22201 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr12--chr10]""]" | chr12:53159887-chr10:70432203 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| CRTC3--AL138701.2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CRTC3^ENSG00000140577.16 | chr15:90629532:+ | AL138701.2^ENSG00000287923.1 | chr13:106062367:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1129:23547:7656 | . | NO_LDAS | 0.0034 | GT | 1.7465 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr15--chr13]""]" | chr15:90629532-chr13:106062367 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| CRPPA--BZW2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CRPPA^ENSG00000214960.11 | chr7:16216066:- | BZW2^ENSG00000136261.15 | chr7:16665437:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1164:33538:3634 | . | NO_LDAS | 0.0034 | GT | 1.8256 | AG | 1.2729 | "[""INTRACHROMOSOMAL[chr7:0.14Mb]""]" | chr7:16216066-chr7:16665437 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| CREBL2--KLHL24 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | CREBL2^ENSG00000111269.3 | chr12:12612187:+ | KLHL24^ENSG00000114796.16 | chr3:183644086:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1426:47210:11061 | . | YES_LDAS | 0.0017 | GT | 1.7819 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr12--chr3]""]" | chr12:12612187-chr3:183644086 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| CREBL2--AC073332.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CREBL2^ENSG00000111269.3 | chr12:12612187:+ | AC073332.1^ENSG00000237773.7 | chr7:17291347:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2312:18660:19566 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr12--chr7]""]" | chr12:12612187-chr7:17291347 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 |
| CRACDL--RCOR3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CRACDL^ENSG00000196872.12 | chr2:98822761:- | RCOR3^ENSG00000117625.14 | chr1:211313631:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1258:30982:12995 | . | NO_LDAS | 0.0034 | GC | 1.231 | AG | 1.3383 | "[""INTERCHROMOSOMAL[chr2--chr1]""]" | chr2:98822761-chr1:211313631 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| CPTP--PRNCR1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | CPTP^ENSG00000224051.7 | chr1:1328642:+ | PRNCR1^ENSG00000282961.1 | chr8:127086691:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2422:15716:23938 | . | NO_LDAS | 0.0017 | GT | 1.9086 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr1--chr8]""]" | chr1:1328642-chr8:127086691 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| CPLANE1--SBNO1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CPLANE1^ENSG00000197603.16 | chr5:37125244:- | SBNO1^ENSG00000139697.14 | chr12:123328895:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1401:37235:16147 | . | YES_LDAS | 0.0034 | GT | 1.7056 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr5--chr12]""]" | chr5:37125244-chr12:123328895 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| COPB1--RRAS2 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | COPB1^ENSG00000129083.13 | chr11:14453225:- | RRAS2^ENSG00000133818.14 | chr11:14295855:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1209:51692:9127 | . | YES_LDAS | 0.0017 | GT | 1.8295 | AG | 1.8295 | "[""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr11:0.08Mb]"",""NEIGHBORS[78934]""]" | chr11:14453225-chr11:14295855 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | ||||
| COL5A2--BDKRB2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | COL5A2^ENSG00000204262.14 | chr2:189052772:- | BDKRB2^ENSG00000168398.7 | chr14:96243460:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1217:27600:29053 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr2--chr14]""]" | chr2:189052772-chr14:96243460 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| COL25A1--COL11A1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | COL25A1^ENSG00000188517.16 | chr4:109010353:- | COL11A1^ENSG00000060718.22 | chr1:102946884:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1411:39565:27553 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8062 | "[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr4--chr1]""]" | chr4:109010353-chr1:102946884 | False | 0 | Excluded | annotation | pattern: | HGNC_GENEFAM | FAIL | 1 | |||
| COL23A1--AL162457.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | COL23A1^ENSG00000050767.18 | chr5:178560682:- | AL162457.1^ENSG00000179253.3 | chr20:61718230:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1111:11768:27946 | . | NO_LDAS | 0.0034 | GT | 1.7465 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr5--chr20]""]" | chr5:178560682-chr20:61718230 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| COL15A1--RBMS3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | COL15A1^ENSG00000204291.11 | chr9:98985774:+ | RBMS3^ENSG00000144642.22 | chr3:29281703:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2184:29817:12882 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr9--chr3]""]" | chr9:98985774-chr3:29281703 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| COL15A1--FLOT1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | COL15A1^ENSG00000204291.11 | chr9:99003519:+ | FLOT1^ENSG00000137312.15 | chr6:30740513:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1153:46644:25886 | . | NO_LDAS | 0.0017 | GC | 1.5219 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr9--chr6]""]" | chr9:99003519-chr6:30740513 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| CNTNAP3C--BX005040.4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CNTNAP3C^ENSG00000283378.1 | chr9:61453030:+ | BX005040.4^ENSG00000283541.1 | chr9:61104578:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1186:29137:24204 | . | YES_LDAS | 0.0034 | GT | 1.8295 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr9:0.22Mb]""]" | chr9:61453030-chr9:61104578 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| CNOT4--SCAF8 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CNOT4^ENSG00000080802.19 | chr7:135395850:- | SCAF8^ENSG00000213079.10 | chr6:154827172:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2236:31515:11930 | . | NO_LDAS | 0.0034 | GT | 1.6729 | AG | 1.7819 | "[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr7--chr6]""]" | chr7:135395850-chr6:154827172 | False | 0 | Excluded | annotation | pattern: | HGNC_GENEFAM | FAIL | 1 | |||
| CNOT4--KLHDC10 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CNOT4^ENSG00000080802.19 | chr7:135509889:- | KLHDC10^ENSG00000128607.14 | chr7:130116445:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2285:13127:25816 | . | NO_LDAS | 0.0034 | GT | 1.4566 | AG | 1.6402 | "[""INTRACHROMOSOMAL[chr7:5.23Mb]""]" | chr7:135509889-chr7:130116445 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| CNOT11--AL121772.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CNOT11^ENSG00000158435.8 | chr2:101269289:+ | AL121772.1^ENSG00000274414.1 | chr20:25240828:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2343:35099:7067 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr2--chr20]""]" | chr2:101269289-chr20:25240828 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| CMTM7--RTKN2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CMTM7^ENSG00000153551.14 | chr3:32454542:+ | RTKN2^ENSG00000182010.11 | chr10:62199861:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1168:31435:17338 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr3--chr10]""]" | chr3:32454542-chr10:62199861 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| CMC4--C13orf46 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CMC4^ENSG00000182712.16 | chrX:155070694:- | C13orf46^ENSG00000283199.3 | chr13:113956839:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1319:12399:27693 | . | YES_LDAS | 0.0034 | GT | 1.4295 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chrX--chr13]""]" | chrX:155070694-chr13:113956839 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| CLUH--PITPNA | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CLUH^ENSG00000132361.18 | chr17:2711562:- | PITPNA^ENSG00000174238.15 | chr17:1558559:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2210:34412:28716 | . | YES_LDAS | 0.0034 | GT | 0.971 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr17:1.13Mb]""]" | chr17:2711562-chr17:1558559 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| CLPX--DENND4A | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CLPX^ENSG00000166855.9 | chr15:65178934:- | DENND4A^ENSG00000174485.16 | chr15:65701192:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2144:41620:7628 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr15:0.47Mb]""]" | chr15:65178934-chr15:65701192 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| CLN8--ITGA3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CLN8^ENSG00000182372.10 | chr8:1784970:+ | ITGA3^ENSG00000005884.18 | chr17:50075667:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1245:41288:10640 | . | NO_LDAS | 0.0034 | GT | 1.5546 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr8--chr17]""]" | chr8:1784970-chr17:50075667 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| CLDND1--TTL | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CLDND1^ENSG00000080822.17 | chr3:98522849:- | TTL^ENSG00000114999.8 | chr2:112528681:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1453:43853:17100 | . | YES_LDAS | 0.0034 | GT | 1.5546 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr3--chr2]""]" | chr3:98522849-chr2:112528681 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| CLCN6--SRGAP2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CLCN6^ENSG00000011021.23 | chr1:11807190:+ | SRGAP2^ENSG00000266028.7 | chr1:206415889:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2221:5118:11607 | . | NO_LDAS | 0.0034 | GT | 1.6895 | AG | 1.5546 | "[""INTRACHROMOSOMAL[chr1:194.36Mb]""]" | chr1:11807190-chr1:206415889 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| CKMT1B--TUBGCP4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CKMT1B^ENSG00000237289.10 | chr15:43599533:+ | TUBGCP4^ENSG00000137822.13 | chr15:43395583:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1454:5797:17520 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.7056 | "[""INTRACHROMOSOMAL[chr15:0.18Mb]""]" | chr15:43599533-chr15:43395583 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| CKAP4--NPIPA1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CKAP4^ENSG00000136026.14 | chr12:106238312:- | NPIPA1^ENSG00000183426.17 | chr16:14924542:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1304:43125:6143 | . | YES_LDAS | 0.0034 | GT | 1.7232 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr12--chr16]""]" | chr12:106238312-chr16:14924542 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| CIITA--FBXL21P | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CIITA^ENSG00000179583.20 | chr16:10903895:+ | FBXL21P^ENSG00000164616.16 | chr5:135951331:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1327:51150:28534 | . | NO_LDAS | 0.0034 | GT | 1.7465 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr16--chr5]""]" | chr16:10903895-chr5:135951331 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| CHST13--CYP2E1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CHST13^ENSG00000180767.10 | chr3:126524429:+ | CYP2E1^ENSG00000130649.10 | chr10:133520491:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1255:20270:4195 | . | NO_LDAS | 0.0034 | GT | 1.3996 | AG | 1.5546 | "[""INTERCHROMOSOMAL[chr3--chr10]""]" | chr3:126524429-chr10:133520491 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| CHRNB2--USP2-AS1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | CHRNB2^ENSG00000160716.6 | chr1:154567995:+ | USP2-AS1^ENSG00000245248.8 | chr11:119381703:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2468:2375:28772 | . | NO_LDAS | 0.0017 | GC | 1.1589 | AG | 1.6049 | "[""INTERCHROMOSOMAL[chr1--chr11]""]" | chr1:154567995-chr11:119381703 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| CHPT1--KCTD9 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CHPT1^ENSG00000111666.11 | chr12:101730636:+ | KCTD9^ENSG00000104756.16 | chr8:25429973:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1291:39063:9253 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr12--chr8]""]" | chr12:101730636-chr8:25429973 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| CHN1--UBQLN1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | CHN1^ENSG00000128656.15 | chr2:175005263:- | UBQLN1^ENSG00000135018.14 | chr9:83707705:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1105:39161:28590 | . | NO_LDAS | 0.0017 | GT | 1.1589 | AG | 1.4716 | "[""INTERCHROMOSOMAL[chr2--chr9]""]" | chr2:175005263-chr9:83707705 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| CHN1--BARX1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CHN1^ENSG00000128656.15 | chr2:175005263:- | BARX1^ENSG00000131668.14 | chr9:93955195:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1314:6485:4755 | . | NO_LDAS | 0.0034 | GT | 1.1589 | AG | 1.231 | "[""INTERCHROMOSOMAL[chr2--chr9]""]" | chr2:175005263-chr9:93955195 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| CHMP7--RBBP8 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | CHMP7^ENSG00000147457.14 | chr8:23246787:+ | RBBP8^ENSG00000101773.19 | chr18:23016880:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2125:33554:2822 | . | NO_LDAS | 0.0011 | GT | 1.7465 | AG | 1.5329 | "[""INTERCHROMOSOMAL[chr8--chr18]""]" | chr8:23246787-chr18:23016880 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| CHMP4A--STRN3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CHMP4A^ENSG00000254505.11 | chr14:24213409:- | STRN3^ENSG00000196792.12 | chr14:30936624:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1142:46134:26040 | . | NO_LDAS | 0.0034 | GT | 1.8295 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr14:6.68Mb]""]" | chr14:24213409-chr14:30936624 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| CHMP3--FHIT | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CHMP3^ENSG00000115561.16 | chr2:86542248:- | FHIT^ENSG00000189283.10 | chr3:61042059:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1115:47477:1687 | . | NO_LDAS | 0.0034 | GT | 1.6895 | AG | 1.231 | "[""INTERCHROMOSOMAL[chr2--chr3]""]" | chr2:86542248-chr3:61042059 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| CHKB--SEH1L | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CHKB^ENSG00000100288.20 | chr22:50582249:- | SEH1L^ENSG00000085415.16 | chr18:12955463:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1176:16007:2976 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr22--chr18]""]" | chr22:50582249-chr18:12955463 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| CHID1--KIAA1109 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CHID1^ENSG00000177830.18 | chr11:910807:- | KIAA1109^ENSG00000138688.16 | chr4:122333764:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1104:12375:22635 | . | NO_LDAS | 0.0034 | GT | 1.585 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr11--chr4]""]" | chr11:910807-chr4:122333764 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| CHFR--AC073111.3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CHFR^ENSG00000072609.18 | chr12:132841518:- | AC073111.3^ENSG00000284691.1 | chr7:150407584:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1137:32413:14802 | . | YES_LDAS | 0.0034 | GT | 1.9899 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr12--chr7]""]" | chr12:132841518-chr7:150407584 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| CHD2--CDCA2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CHD2^ENSG00000173575.22 | chr15:93020258:+ | CDCA2^ENSG00000184661.14 | chr8:25503373:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1103:2845:16470 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr15--chr8]""]" | chr15:93020258-chr8:25503373 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| CHCHD10--VEGFC | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CHCHD10^ENSG00000250479.9 | chr22:23767834:- | VEGFC^ENSG00000150630.4 | chr4:176792822:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1166:36208:10528 | . | NO_LDAS | 0.0034 | GT | 1.6402 | AG | 1.053 | "[""INTERCHROMOSOMAL[chr22--chr4]""]" | chr22:23767834-chr4:176792822 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 |
| CHCHD10--DHRS4-AS1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CHCHD10^ENSG00000250479.9 | chr22:23767834:- | DHRS4-AS1^ENSG00000215256.4 | chr14:23988786:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2119:38368:5050 | . | NO_LDAS | 0.0034 | GT | 1.6402 | AG | 1.3753 | "[""INTERCHROMOSOMAL[chr22--chr14]""]" | chr22:23767834-chr14:23988786 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| CHCHD10--CLVS2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CHCHD10^ENSG00000250479.9 | chr22:23767834:- | CLVS2^ENSG00000146352.13 | chr6:122996341:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1156:30092:24401 | . | NO_LDAS | 0.0034 | GT | 1.6402 | AG | 1.1589 | "[""INTERCHROMOSOMAL[chr22--chr6]""]" | chr22:23767834-chr6:122996341 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 1 | |||
| CFAP74--SDF2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CFAP74^ENSG00000142609.18 | chr1:1960040:- | SDF2^ENSG00000132581.10 | chr17:28649276:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1171:41264:19342 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr1--chr17]""]" | chr1:1960040-chr17:28649276 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| CERS6-AS1--PLEKHM3 | 1 | 0 | 0.17 | 0.0 | ONLY_REF_SPLICE | CERS6-AS1^ENSG00000227617.9 | chr2:168783955:- | PLEKHM3^ENSG00000178385.15 | chr2:207908577:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1285:16654:7095 | . | NO_LDAS | 0.0006 | GT | 1.8892 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr2:39.03Mb]""]" | chr2:168783955-chr2:207908577 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| CERS6--SP100 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CERS6^ENSG00000172292.15 | chr2:168717978:+ | SP100^ENSG00000067066.17 | chr2:230494416:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2243:45091:1112 | . | YES_LDAS | 0.0034 | GT | 1.6402 | AG | 1.231 | "[""INTRACHROMOSOMAL[chr2:61.64Mb]""]" | chr2:168717978-chr2:230494416 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| CERS1--CASP16P | 1 | 0 | 0.17 | 0.0 | INCL_NON_REF_SPLICE | CERS1^ENSG00000223802.8 | chr19:18868917:- | CASP16P^ENSG00000228146.8 | chr16:3149908:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1447:30043:22999 | . | NO_LDAS | 0.0006 | GT | 1.4295 | AG | 1.6729 | "[""INTERCHROMOSOMAL[chr19--chr16]""]" | chr19:18868917-chr16:3149908 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| CEP70--C3orf70 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CEP70^ENSG00000114107.9 | chr3:138570318:- | C3orf70^ENSG00000187068.3 | chr3:185083563:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1102:10198:17801 | . | YES_LDAS | 0.0034 | GT | 1.8295 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr3:46.48Mb]""]" | chr3:138570318-chr3:185083563 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| CEP63--ACAD11 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CEP63^ENSG00000182923.19 | chr3:134507286:+ | ACAD11^ENSG00000240303.8 | chr3:132631479:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1466:51441:20659 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr3:1.83Mb]""]" | chr3:134507286-chr3:132631479 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| CEP152--SEC1P | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CEP152^ENSG00000103995.14 | chr15:48741064:- | SEC1P^ENSG00000232871.8 | chr19:48638091:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1297:20351:12574 | . | NO_LDAS | 0.0034 | AT | 1.5219 | AC | 1.7968 | "[""INTERCHROMOSOMAL[chr15--chr19]""]" | chr15:48741064-chr19:48638091 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| CEP128--AC009121.2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CEP128^ENSG00000100629.17 | chr14:80777882:- | AC009121.2^ENSG00000262703.1 | chr16:11348815:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1172:47105:2808 | . | NO_LDAS | 0.0034 | GT | 1.6402 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr14--chr16]""]" | chr14:80777882-chr16:11348815 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| CELF4--GOLPH3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CELF4^ENSG00000101489.20 | chr18:37275187:- | GOLPH3^ENSG00000113384.14 | chr5:32173911:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2120:28692:19847 | . | NO_LDAS | 0.0034 | GC | 1.7819 | AG | 1.5219 | "[""INTERCHROMOSOMAL[chr18--chr5]""]" | chr18:37275187-chr5:32173911 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| CELF3--SEPTIN2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CELF3^ENSG00000159409.15 | chr1:151707868:- | SEPTIN2^ENSG00000168385.18 | chr2:241350089:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2309:40892:26488 | . | NO_LDAS | 0.0034 | GC | 1.8295 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr1--chr2]""]" | chr1:151707868-chr2:241350089 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| CELF1--DAP3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CELF1^ENSG00000149187.18 | chr11:47472191:- | DAP3^ENSG00000132676.16 | chr1:155738609:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1180:17237:8497 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr11--chr1]""]" | chr11:47472191-chr1:155738609 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| CEACAM19--PVR | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CEACAM19^ENSG00000186567.13 | chr19:44673845:+ | PVR^ENSG00000073008.15 | chr19:44661292:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1177:47971:19104 | . | YES_LDAS | 0.0034 | GT | 1.3996 | AG | 1.9329 | "[""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr19:0.00Mb]"",""NEIGHBORS_OVERLAP:+:+:[3884]""]" | chr19:44673845-chr19:44661292 | False | 0 | Excluded | annotation | pattern: | HGNC_GENEFAM | FAIL | 1 | |||
| CDS2--SNRPN | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CDS2^ENSG00000101290.14 | chr20:5127149:+ | SNRPN^ENSG00000128739.23 | chr15:24962114:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1192:17115:23756 | . | YES_LDAS | 0.0034 | GT | 1.5656 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr20--chr15]""]" | chr20:5127149-chr15:24962114 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| CDK5RAP3--PDE12 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CDK5RAP3^ENSG00000108465.15 | chr17:47978649:+ | PDE12^ENSG00000174840.9 | chr3:57557177:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1428:12108:11719 | . | NO_LDAS | 0.0034 | GT | 1.4566 | AG | 1.4295 | "[""INTERCHROMOSOMAL[chr17--chr3]""]" | chr17:47978649-chr3:57557177 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| CDHR5--AL109615.4 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | CDHR5^ENSG00000099834.19 | chr11:618806:- | AL109615.4^ENSG00000287562.1 | chr6:44092343:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1178:17237:27890 | . | NO_LDAS | 0.0017 | GT | 1.6729 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr11--chr6]""]" | chr11:618806-chr6:44092343 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| CDHR5--AL109615.4 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | CDHR5^ENSG00000099834.19 | chr11:618713:- | AL109615.4^ENSG00000287562.1 | chr6:44092343:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1178:17237:27890 | . | NO_LDAS | 0.0017 | GT | 1.6402 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr11--chr6]""]" | chr11:618713-chr6:44092343 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| CDC42--SPIDR | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CDC42^ENSG00000070831.17 | chr1:22097968:+ | SPIDR^ENSG00000164808.17 | chr8:47396376:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1132:11760:1420 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr1--chr8]""]" | chr1:22097968-chr8:47396376 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| CDC20B--KLF3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CDC20B^ENSG00000164287.13 | chr5:55172965:- | KLF3^ENSG00000109787.13 | chr4:38680587:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2134:48949:29235 | . | NO_LDAS | 0.0034 | GT | 1.7056 | AG | 1.5219 | "[""INTERCHROMOSOMAL[chr5--chr4]""]" | chr5:55172965-chr4:38680587 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| CD99P1--PRKX | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | CD99P1^ENSG00000223773.7 | chrX:2626642:+ | PRKX^ENSG00000183943.6 | chrX:3674766:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2379:10748:29067 | . | YES_LDAS | 0.0017 | GT | 1.7968 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chrY--chrX]""]" | chrX:2626642-chrX:3674766 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| CD99--FENDRR | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CD99^ENSG00000002586.20 | chrX:2723368:+ | FENDRR^ENSG00000268388.6 | chr16:86488019:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1163:2100:15265 | . | NO_LDAS | 0.0034 | GT | 1.231 | AG | 1.6729 | "[""INTERCHROMOSOMAL[chrY--chr16]""]" | chrX:2723368-chr16:86488019 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| CD63--BX537318.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CD63^ENSG00000135404.12 | chr12:55726121:- | BX537318.1^ENSG00000273145.1 | chr22:46014793:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1459:8103:2149 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.4256 | "[""INTERCHROMOSOMAL[chr12--chr22]""]" | chr12:55726121-chr22:46014793 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| CD6--SGSM3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CD6^ENSG00000013725.14 | chr11:61008399:+ | SGSM3^ENSG00000100359.21 | chr22:40408126:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2204:8321:11607 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.1033 | "[""INTERCHROMOSOMAL[chr11--chr22]""]" | chr11:61008399-chr22:40408126 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| CD47--SUCLG2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CD47^ENSG00000196776.17 | chr3:108090863:- | SUCLG2^ENSG00000172340.15 | chr3:67529186:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1133:43117:12854 | . | YES_LDAS | 0.0034 | GT | 1.5058 | AG | 1.6729 | "[""INTRACHROMOSOMAL[chr3:40.39Mb]""]" | chr3:108090863-chr3:67529186 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| CD36--CEP295 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CD36^ENSG00000135218.19 | chr7:80546267:+ | CEP295^ENSG00000166004.15 | chr11:93687644:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2464:25828:21556 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr7--chr11]""]" | chr7:80546267-chr11:93687644 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| CD27-AS1--AC096588.1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CD27-AS1^ENSG00000215039.7 | chr12:6450341:- | AC096588.1^ENSG00000249392.1 | chr4:59551254:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1285:31483:11874 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr12--chr4]""]" | chr12:6450341-chr4:59551254 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| CCNY--GDI2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CCNY^ENSG00000108100.18 | chr10:35553185:+ | GDI2^ENSG00000057608.17 | chr10:5800705:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1279:3573:18768 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr10:29.40Mb]""]" | chr10:35553185-chr10:5800705 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| CCNY--AL391807.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CCNY^ENSG00000108100.18 | chr10:35483478:+ | AL391807.1^ENSG00000230910.4 | chr6:68630859:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2277:42227:19804 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr10--chr6]""]" | chr10:35483478-chr6:68630859 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| CCND3--TBC1D14 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CCND3^ENSG00000112576.13 | chr6:42048168:- | TBC1D14^ENSG00000132405.19 | chr4:6996325:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2440:8208:10711 | . | NO_LDAS | 0.0034 | GT | 1.7465 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr6--chr4]""]" | chr6:42048168-chr4:6996325 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| CCL27--ABCF2P1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CCL27^ENSG00000213927.4 | chr9:34663734:- | ABCF2P1^ENSG00000242159.1 | chr3:88318118:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1454:31475:29095 | . | NO_LDAS | 0.0034 | GT | 1.8295 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr9--chr3]""]" | chr9:34663734-chr3:88318118 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| CCDC7--LINC02261 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CCDC7^ENSG00000216937.13 | chr10:32854489:+ | LINC02261^ENSG00000249699.1 | chr4:27231364:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2210:49233:1336 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr10--chr4]""]" | chr10:32854489-chr4:27231364 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| CCDC57--SORBS2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CCDC57^ENSG00000176155.19 | chr17:82127692:- | SORBS2^ENSG00000154556.18 | chr4:185678822:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1262:38384:17689 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr17--chr4]""]" | chr17:82127692-chr4:185678822 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| CCDC198--FAM120A | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | CCDC198^ENSG00000100557.10 | chr14:57475582:- | FAM120A^ENSG00000048828.17 | chr9:93476256:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1193:35415:15517 | . | YES_LDAS | 0.0017 | GT | 1.9329 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr14--chr9]""]" | chr14:57475582-chr9:93476256 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| CCDC198--EIF4E | 1 | 0 | 0.33 | 0.0 | ONLY_REF_SPLICE | CCDC198^ENSG00000100557.10 | chr14:57475582:- | EIF4E^ENSG00000151247.13 | chr4:98901982:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2113:33295:20197 | . | YES_LDAS | 0.0011 | GT | 1.9329 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr14--chr4]""]" | chr14:57475582-chr4:98901982 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| CCDC148--PKP4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CCDC148^ENSG00000153237.18 | chr2:158220595:- | PKP4^ENSG00000144283.22 | chr2:158533180:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1467:50066:17745 | . | YES_LDAS | 0.0034 | GT | 1.1589 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr2:0.00Mb]"",""LOCAL_INVERSION:-:+:[199]""]" | chr2:158220595-chr2:158533180 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| CCDC124--AL592146.2 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | CCDC124^ENSG00000007080.11 | chr19:17936579:+ | AL592146.2^ENSG00000286572.1 | chr1:204064609:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2192:41046:15461 | . | NO_LDAS | 0.0017 | GT | 1.5219 | AG | 0.971 | "[""INTERCHROMOSOMAL[chr19--chr1]""]" | chr19:17936579-chr1:204064609 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| CCAR2--HSF5 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CCAR2^ENSG00000158941.16 | chr8:22617778:+ | HSF5^ENSG00000176160.11 | chr17:58420402:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1427:50066:18529 | . | NO_LDAS | 0.0034 | GT | 1.9899 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr8--chr17]""]" | chr8:22617778-chr17:58420402 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| CCAR1--RUFY2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CCAR1^ENSG00000060339.14 | chr10:68749685:+ | RUFY2^ENSG00000204130.14 | chr10:68401737:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1209:32899:15363 | . | YES_LDAS | 0.0034 | GT | 1.5546 | AG | 1.5628 | "[""INTRACHROMOSOMAL[chr10:0.31Mb]""]" | chr10:68749685-chr10:68401737 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| CBLB--ZNF251 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CBLB^ENSG00000114423.23 | chr3:105853414:- | ZNF251^ENSG00000198169.9 | chr8:144723382:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1408:45179:4741 | . | YES_LDAS | 0.0034 | GT | 1.8062 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr3--chr8]""]" | chr3:105853414-chr8:144723382 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| CBFA2T3--AP006621.1 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | CBFA2T3^ENSG00000129993.15 | chr16:88879453:- | AP006621.1^ENSG00000255108.1 | chr11:824679:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1331:47542:10150 | . | NO_LDAS | 0.0011 | GT | 1.9656 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr16--chr11]""]" | chr16:88879453-chr11:824679 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| CASTOR2--MYO1C | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CASTOR2^ENSG00000274070.2 | chr7:75029087:+ | MYO1C^ENSG00000197879.17 | chr17:1471951:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2207:3395:9660 | . | NO_LDAS | 0.0034 | GT | 1.8295 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr7--chr17]""]" | chr7:75029087-chr17:1471951 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| CARF--HELZ | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CARF^ENSG00000138380.18 | chr2:202918043:+ | HELZ^ENSG00000198265.12 | chr17:67138114:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1166:32567:27595 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.4295 | "[""INTERCHROMOSOMAL[chr2--chr17]""]" | chr2:202918043-chr17:67138114 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| CAPZB--RPAIN | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CAPZB^ENSG00000077549.19 | chr1:19419661:- | RPAIN^ENSG00000129197.15 | chr17:5426686:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2385:47113:28044 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr1--chr17]""]" | chr1:19419661-chr17:5426686 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| CAMSAP1--PPIG | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CAMSAP1^ENSG00000130559.19 | chr9:135907000:- | PPIG^ENSG00000138398.17 | chr2:169584648:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1339:35925:16428 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr9--chr2]""]" | chr9:135907000-chr2:169584648 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| CAMKMT--MCTP1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CAMKMT^ENSG00000143919.15 | chr2:44390305:+ | MCTP1^ENSG00000175471.19 | chr5:94888972:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1458:2917:18838 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr2--chr5]""]" | chr2:44390305-chr5:94888972 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| CAMK2G--IRAG2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CAMK2G^ENSG00000148660.21 | chr10:73837468:- | IRAG2^ENSG00000118308.15 | chr12:25004714:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1153:18499:12952 | . | NO_LDAS | 0.0034 | GT | 1.8295 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr10--chr12]""]" | chr10:73837468-chr12:25004714 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| CAMK2G--AC114964.1 | 1 | 0 | 0.05 | 0.0 | INCL_NON_REF_SPLICE | CAMK2G^ENSG00000148660.21 | chr10:73817023:- | AC114964.1^ENSG00000248699.1 | chr5:15451049:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1304:28417:25928 | . | NO_LDAS | 0.0002 | GT | 1.7968 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr10--chr5]""]" | chr10:73817023-chr5:15451049 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| CACYBP--CGREF1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CACYBP^ENSG00000116161.18 | chr1:175004784:+ | CGREF1^ENSG00000138028.16 | chr2:27099131:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1344:36143:7782 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr1--chr2]""]" | chr1:175004784-chr2:27099131 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| CACNB4--MARCHF7 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CACNB4^ENSG00000182389.20 | chr2:151841903:- | MARCHF7^ENSG00000136536.15 | chr2:159729009:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1158:51045:18347 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.4716 | "[""INTRACHROMOSOMAL[chr2:7.61Mb]""]" | chr2:151841903-chr2:159729009 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| CACNB4--FAM155A | 1 | 0 | 0.25 | 0.0 | INCL_NON_REF_SPLICE | CACNB4^ENSG00000182389.20 | chr2:151874037:- | FAM155A^ENSG00000204442.4 | chr13:107866374:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1104:14437:2808 | . | NO_LDAS | 0.0009 | GT | 1.5301 | AG | 1.5656 | "[""INTERCHROMOSOMAL[chr2--chr13]""]" | chr2:151874037-chr13:107866374 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| CACNB2--CACNB1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CACNB2^ENSG00000165995.22 | chr10:18518416:+ | CACNB1^ENSG00000067191.16 | chr17:39184383:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1285:49224:12672 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9329 | "[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr10--chr17]""]" | chr10:18518416-chr17:39184383 | False | 0 | Excluded | annotation | pattern: | HGNC_GENEFAM | FAIL | 1 | |||
| CACNA2D3--TLE1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CACNA2D3^ENSG00000157445.15 | chr3:54642241:+ | TLE1^ENSG00000196781.16 | chr9:81593274:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1301:36369:3915 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr3--chr9]""]" | chr3:54642241-chr9:81593274 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| CA13--CA3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CA13^ENSG00000185015.8 | chr8:85281639:+ | CA3^ENSG00000164879.7 | chr8:85439712:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1344:4883:27119 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.8892 | "[""DGD_PARALOGS"",""ConjoinG"",""GTEx_recurrent_StarF2019"",""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr8:0.09Mb]"",""NEIGHBORS[89363]""]" | chr8:85281639-chr8:85439712 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 |
| C9orf40--NDUFS7 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | C9orf40^ENSG00000135045.7 | chr9:74952303:- | NDUFS7^ENSG00000115286.20 | chr19:1395489:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1157:39614:17184 | . | NO_LDAS | 0.0034 | GT | 1.1589 | AG | 0.9183 | "[""INTERCHROMOSOMAL[chr9--chr19]""]" | chr9:74952303-chr19:1395489 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| C9orf131--KCNH8 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | C9orf131^ENSG00000174038.13 | chr9:35043302:+ | KCNH8^ENSG00000183960.9 | chr3:19438164:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1388:14575:9071 | . | NO_LDAS | 0.0034 | GT | 1.6895 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr9--chr3]""]" | chr9:35043302-chr3:19438164 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| C8orf76--DIRC3-AS1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | C8orf76^ENSG00000189376.12 | chr8:123241230:- | DIRC3-AS1^ENSG00000233143.2 | chr2:217304272:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1310:46094:26250 | . | NO_LDAS | 0.0034 | GT | 1.8323 | AG | 1.5058 | "[""INTERCHROMOSOMAL[chr8--chr2]""]" | chr8:123241230-chr2:217304272 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| C5orf24--KIF13A | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | C5orf24^ENSG00000181904.9 | chr5:134855327:+ | KIF13A^ENSG00000137177.20 | chr6:17764946:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2139:10554:16512 | . | YES_LDAS | 0.0034 | GT | 1.8062 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr5--chr6]""]" | chr5:134855327-chr6:17764946 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| C1orf74--RPL11 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | C1orf74^ENSG00000162757.4 | chr1:209779719:- | RPL11^ENSG00000142676.14 | chr1:23695798:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1110:8993:16470 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.8295 | "[""INTRACHROMOSOMAL[chr1:186.08Mb]""]" | chr1:209779719-chr1:23695798 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| C1orf43--UBE3B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | C1orf43^ENSG00000143612.21 | chr1:154213182:- | UBE3B^ENSG00000151148.14 | chr12:109516765:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1436:31054:29403 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr1--chr12]""]" | chr1:154213182-chr12:109516765 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| C1orf21--ASAP2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | C1orf21^ENSG00000116667.15 | chr1:184387368:+ | ASAP2^ENSG00000151693.11 | chr2:9350808:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1236:24251:25465 | . | YES_LDAS | 0.0034 | GT | 1.5301 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr1--chr2]""]" | chr1:184387368-chr2:9350808 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| C1RL--AL391095.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | C1RL^ENSG00000139178.11 | chr12:7096670:- | AL391095.1^ENSG00000224635.2 | chr20:38406327:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1187:20764:16175 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.6729 | "[""INTERCHROMOSOMAL[chr12--chr20]""]" | chr12:7096670-chr20:38406327 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| C17orf80--ACYP1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | C17orf80^ENSG00000141219.15 | chr17:73233325:+ | ACYP1^ENSG00000119640.9 | chr14:75053659:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1141:24898:12098 | . | NO_LDAS | 0.0034 | GT | 1.7968 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chr17--chr14]""]" | chr17:73233325-chr14:75053659 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| C15orf48--TSN | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | C15orf48^ENSG00000166920.13 | chr15:45430606:+ | TSN^ENSG00000211460.12 | chr2:121765168:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1439:43626:25171 | . | NO_LDAS | 0.0017 | GT | 1.2867 | AG | 1.5546 | "[""INTERCHROMOSOMAL[chr15--chr2]""]" | chr15:45430606-chr2:121765168 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| BX890604.1--DOCK9 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | BX890604.1^ENSG00000285756.2 | chrX:3843341:- | DOCK9^ENSG00000088387.19 | chr13:98955551:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1287:43869:10598 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chrX--chr13]""]" | chrX:3843341-chr13:98955551 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| BX005040.4--NUP98 | 1 | 0 | 0.25 | 0.0 | ONLY_REF_SPLICE | BX005040.4^ENSG00000283541.1 | chr9:61081890:- | NUP98^ENSG00000110713.17 | chr11:3753408:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1229:44112:24863 | . | NO_LDAS | 0.0009 | GT | 1.8892 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr9--chr11]""]" | chr9:61081890-chr11:3753408 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| BST1--PRKAB2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | BST1^ENSG00000109743.11 | chr4:15722934:+ | PRKAB2^ENSG00000131791.8 | chr1:147162573:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1304:30140:20393 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr4--chr1]""]" | chr4:15722934-chr1:147162573 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| BRCC3--SGF29 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | BRCC3^ENSG00000185515.15 | chrX:155122068:+ | SGF29^ENSG00000176476.9 | chr16:28581055:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2371:49977:18459 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chrX--chr16]""]" | chrX:155122068-chr16:28581055 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| BOLA2B--SMG1P2 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | BOLA2B^ENSG00000169627.9 | chr16:30193358:- | SMG1P2^ENSG00000205534.6 | chr16:29548658:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1434:25399:2766 | . | YES_LDAS | 0.0017 | GT | 1.9329 | AG | 1.9656 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr16:0.60Mb]""]" | chr16:30193358-chr16:29548658 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | ||||
| BNIP3--BNIP3L | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | BNIP3^ENSG00000176171.11 | chr10:131970864:- | BNIP3L^ENSG00000104765.16 | chr8:26408227:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2267:37381:10150 | . | YES_LDAS | 0.0034 | GT | 1.5219 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr10--chr8]""]" | chr10:131970864-chr8:26408227 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| BMP6--LEF1 | 1 | 0 | 0.25 | 0.0 | INCL_NON_REF_SPLICE | BMP6^ENSG00000153162.9 | chr6:7726133:+ | LEF1^ENSG00000138795.10 | chr4:108167748:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1166:17342:22999 | . | NO_LDAS | 0.0009 | GT | 1.4716 | AG | 1.3753 | "[""INTERCHROMOSOMAL[chr6--chr4]""]" | chr6:7726133-chr4:108167748 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| BMP6--BMP7 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | BMP6^ENSG00000153162.9 | chr6:7879150:+ | BMP7^ENSG00000101144.13 | chr20:57173310:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2491:28846:22439 | . | YES_LDAS | 0.0034 | GT | 1.8295 | AG | 1.9656 | "[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr6--chr20]""]" | chr6:7879150-chr20:57173310 | False | 0 | Excluded | annotation | pattern: | HGNC_GENEFAM | FAIL | 1 | |||
| BLNK--C3orf52 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | BLNK^ENSG00000095585.17 | chr10:96223826:- | C3orf52^ENSG00000114529.13 | chr3:112130722:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2288:11663:4979 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr10--chr3]""]" | chr10:96223826-chr3:112130722 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| BICC1--RELCH | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | BICC1^ENSG00000122870.12 | chr10:58820468:+ | RELCH^ENSG00000134444.15 | chr18:62228349:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1177:30318:9463 | . | NO_LDAS | 0.0034 | GT | 1.9219 | AG | 1.6729 | "[""INTERCHROMOSOMAL[chr10--chr18]""]" | chr10:58820468-chr18:62228349 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| BHMT2--SRP9 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | BHMT2^ENSG00000132840.10 | chr5:79077612:+ | SRP9^ENSG00000143742.14 | chr1:225777935:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1433:32535:26418 | . | NO_LDAS | 0.0017 | GT | 1.5219 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr5--chr1]""]" | chr5:79077612-chr1:225777935 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| BHLHE22--UNC5B | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | BHLHE22^ENSG00000180828.3 | chr8:64580395:+ | UNC5B^ENSG00000107731.12 | chr10:71212895:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1421:45964:13107 | . | NO_LDAS | 0.0034 | GT | 1.5301 | AG | 1.2419 | "[""INTERCHROMOSOMAL[chr8--chr10]""]" | chr8:64580395-chr10:71212895 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| BDKRB2--BDKRB1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | BDKRB2^ENSG00000168398.7 | chr14:96237181:+ | BDKRB1^ENSG00000100739.11 | chr14:96263673:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1282:44629:16371 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9329 | "[""ConjoinG"",""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr14:0.01Mb]"",""NEIGHBORS[12044]""]" | chr14:96237181-chr14:96263673 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | ||||
| BDKRB2--BDKRB1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | BDKRB2^ENSG00000168398.7 | chr14:96237181:+ | BDKRB1^ENSG00000100739.11 | chr14:96262652:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1464:32114:14536 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8256 | "[""ConjoinG"",""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr14:0.01Mb]"",""NEIGHBORS[12044]""]" | chr14:96237181-chr14:96262652 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | ||||
| BCL7B--SETDB2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | BCL7B^ENSG00000106635.8 | chr7:73557648:- | SETDB2^ENSG00000136169.16 | chr13:49444671:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1442:17673:14073 | . | NO_LDAS | 0.0034 | GC | 0.8366 | AG | 1.3383 | "[""INTERCHROMOSOMAL[chr7--chr13]""]" | chr7:73557648-chr13:49444671 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| BCL2--CLEC2D | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | BCL2^ENSG00000171791.14 | chr18:63318082:- | CLEC2D^ENSG00000069493.15 | chr12:9687902:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1452:49338:28198 | . | NO_LDAS | 0.0034 | GT | 1.7968 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr18--chr12]""]" | chr18:63318082-chr12:9687902 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| BCL2--CEP192 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | BCL2^ENSG00000171791.14 | chr18:63318082:- | CEP192^ENSG00000101639.18 | chr18:13048859:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1206:17690:3088 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.8892 | "[""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr18:50.00Mb]""]" | chr18:63318082-chr18:13048859 | False | 0 | Excluded | annotation | pattern: | HGNC_GENEFAM | FAIL | 1 | |||
| BCAN--PRSS27 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | BCAN^ENSG00000132692.19 | chr1:156658737:+ | PRSS27^ENSG00000172382.10 | chr16:2712589:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1178:14923:15222 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr1--chr16]""]" | chr1:156658737-chr16:2712589 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| BANP--SNX29P1 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | BANP^ENSG00000172530.20 | chr16:88035394:+ | SNX29P1^ENSG00000158482.10 | chr16:21376648:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2265:12731:24709 | . | YES_LDAS | 0.0017 | GT | 1.5656 | AG | 1.8256 | "[""INTRACHROMOSOMAL[chr16:66.56Mb]""]" | chr16:88035394-chr16:21376648 | True | aih_curated_blacklist | score(5) | 0 | aih_curated_blacklist | score(5) | FAIL | 1 | |||
| BAIAP2--CAPN10 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | BAIAP2^ENSG00000175866.15 | chr17:81086580:+ | CAPN10^ENSG00000142330.20 | chr2:240616388:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1463:17795:16189 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.5656 | "[""INTERCHROMOSOMAL[chr17--chr2]""]" | chr17:81086580-chr2:240616388 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| BAG1--DENND4C | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | BAG1^ENSG00000107262.26 | chr9:33264224:- | DENND4C^ENSG00000137145.21 | chr9:19276158:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1106:21516:29557 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.7232 | "[""INTRACHROMOSOMAL[chr9:13.87Mb]""]" | chr9:33264224-chr9:19276158 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| BACH1--KCNK6 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | BACH1^ENSG00000156273.16 | chr21:29329693:+ | KCNK6^ENSG00000099337.5 | chr19:38325138:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1285:31054:28338 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr21--chr19]""]" | chr21:29329693-chr19:38325138 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| B4GALNT3--KREMEN1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | B4GALNT3^ENSG00000139044.12 | chr12:460545:+ | KREMEN1^ENSG00000183762.13 | chr22:29137342:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1303:39080:23462 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.5656 | "[""INTERCHROMOSOMAL[chr12--chr22]""]" | chr12:460545-chr22:29137342 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| B2M--ATF3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | B2M^ENSG00000166710.21 | chr15:44711613:+ | ATF3^ENSG00000162772.17 | chr1:212615041:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1475:11315:17773 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr15--chr1]""]" | chr15:44711613-chr1:212615041 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| AXL--XPO5 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AXL^ENSG00000167601.12 | chr19:41231047:+ | XPO5^ENSG00000124571.18 | chr6:43526707:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1188:7367:1350 | . | NO_LDAS | 0.0034 | GT | 1.6895 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr19--chr6]""]" | chr19:41231047-chr6:43526707 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ATXN7L3B--ADAMTS7 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | ATXN7L3B^ENSG00000253719.4 | chr12:74538316:+ | ADAMTS7^ENSG00000136378.15 | chr15:78788374:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1310:42283:15839 | . | NO_LDAS | 0.0017 | GC | 1.5628 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr12--chr15]""]" | chr12:74538316-chr15:78788374 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ATXN7--AC087289.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ATXN7^ENSG00000163635.20 | chr3:63988324:+ | AC087289.1^ENSG00000266980.1 | chr17:75819820:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1181:3467:14186 | . | NO_LDAS | 0.0034 | GT | 1.8295 | AG | 1.6729 | "[""INTERCHROMOSOMAL[chr3--chr17]""]" | chr3:63988324-chr17:75819820 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ATXN10--ZNF521 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ATXN10^ENSG00000130638.17 | chr22:45843733:+ | ZNF521^ENSG00000198795.11 | chr18:25322187:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2344:48860:9884 | . | YES_LDAS | 0.0034 | GT | 1.3996 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chr22--chr18]""]" | chr22:45843733-chr18:25322187 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| ATXN10--ITGB5 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ATXN10^ENSG00000130638.17 | chr22:45693078:+ | ITGB5^ENSG00000082781.12 | chr3:124873531:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1113:9689:3186 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr22--chr3]""]" | chr22:45693078-chr3:124873531 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| ATP8B4--DBN1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ATP8B4^ENSG00000104043.15 | chr15:50182465:- | DBN1^ENSG00000113758.13 | chr5:177466962:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1371:18296:3999 | . | NO_LDAS | 0.0034 | GC | 1.5058 | AG | 1.4566 | "[""INTERCHROMOSOMAL[chr15--chr5]""]" | chr15:50182465-chr5:177466962 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ATP6V1B2--PIKFYVE | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ATP6V1B2^ENSG00000147416.11 | chr8:20225406:+ | PIKFYVE^ENSG00000115020.17 | chr2:208285726:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1126:9244:8413 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr8--chr2]""]" | chr8:20225406-chr2:208285726 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | ||||
| ATP6V1B2--GSK3B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ATP6V1B2^ENSG00000147416.11 | chr8:20225406:+ | GSK3B^ENSG00000082701.17 | chr3:120002239:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1266:13531:13625 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.5219 | "[""INTERCHROMOSOMAL[chr8--chr3]""]" | chr8:20225406-chr3:120002239 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| ATP5PD--RYR3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ATP5PD^ENSG00000167863.12 | chr17:75039209:- | RYR3^ENSG00000198838.14 | chr15:33821279:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1378:14154:12630 | . | NO_LDAS | 0.0034 | GT | 1.3996 | AG | 1.4716 | "[""INTERCHROMOSOMAL[chr17--chr15]""]" | chr17:75039209-chr15:33821279 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ATP5PB--DMAP1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ATP5PB^ENSG00000116459.11 | chr1:111454356:+ | DMAP1^ENSG00000178028.14 | chr1:44218320:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2290:21403:24681 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8256 | "[""INTRACHROMOSOMAL[chr1:67.23Mb]""]" | chr1:111454356-chr1:44218320 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ATP5F1AP4--ATP5F1A | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ATP5F1AP4^ENSG00000258877.2 | chr14:62605413:- | ATP5F1A^ENSG00000152234.16 | chr18:46089996:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2226:39929:2541 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr14--chr18]""]" | chr14:62605413-chr18:46089996 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | ||||
| ATP2C2--VPS8 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ATP2C2^ENSG00000064270.13 | chr16:84425801:+ | VPS8^ENSG00000156931.16 | chr3:184993983:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1372:21249:19510 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr16--chr3]""]" | chr16:84425801-chr3:184993983 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| ATP1A2--ATP1A1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ATP1A2^ENSG00000018625.15 | chr1:160129400:+ | ATP1A1^ENSG00000163399.16 | chr1:116393531:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1141:7359:23560 | . | NO_LDAS | 0.0034 | GT | 1.6895 | AG | 1.7968 | "[""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr1:43.71Mb]""]" | chr1:160129400-chr1:116393531 | False | 0 | Excluded | annotation | pattern: | HGNC_GENEFAM | FAIL | 1 | |||
| ATM--NPAT | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ATM^ENSG00000149311.19 | chr11:108304852:+ | NPAT^ENSG00000149308.17 | chr11:108190500:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1252:9519:6619 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr11:0.00Mb]"",""LOCAL_INVERSION:+:-:[194]""]" | chr11:108304852-chr11:108190500 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| ATG2B--TUT7 | 1 | 0 | 0.25 | 0.0 | INCL_NON_REF_SPLICE | ATG2B^ENSG00000066739.12 | chr14:96306714:- | TUT7^ENSG00000083223.18 | chr9:86323187:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1409:31831:28702 | . | NO_LDAS | 0.0009 | GT | 1.8062 | AG | 0.9968 | "[""INTERCHROMOSOMAL[chr14--chr9]""]" | chr14:96306714-chr9:86323187 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ATG2B--PPIP5K2 | 1 | 0 | 0.25 | 0.0 | INCL_NON_REF_SPLICE | ATG2B^ENSG00000066739.12 | chr14:96306714:- | PPIP5K2^ENSG00000145725.20 | chr5:103208988:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1409:31831:28702 | . | NO_LDAS | 0.0009 | GT | 1.8062 | AG | 0.9968 | "[""INTERCHROMOSOMAL[chr14--chr5]""]" | chr14:96306714-chr5:103208988 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ATG2B--PELP1 | 1 | 0 | 0.25 | 0.0 | INCL_NON_REF_SPLICE | ATG2B^ENSG00000066739.12 | chr14:96306714:- | PELP1^ENSG00000141456.16 | chr17:4672137:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1409:31831:28702 | . | NO_LDAS | 0.0009 | GT | 1.8062 | AG | 0.9968 | "[""INTERCHROMOSOMAL[chr14--chr17]""]" | chr14:96306714-chr17:4672137 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ATG2B--DCAF8L2 | 1 | 0 | 0.25 | 0.0 | INCL_NON_REF_SPLICE | ATG2B^ENSG00000066739.12 | chr14:96306714:- | DCAF8L2^ENSG00000189186.10 | chrX:27747322:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1409:31831:28702 | . | NO_LDAS | 0.0009 | GT | 1.8062 | AG | 0.9968 | "[""INTERCHROMOSOMAL[chr14--chrX]""]" | chr14:96306714-chrX:27747322 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ATG2A--DPYSL3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ATG2A^ENSG00000110046.13 | chr11:64908991:- | DPYSL3^ENSG00000113657.13 | chr5:147418570:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1368:46474:18894 | . | NO_LDAS | 0.0034 | GT | 1.7056 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr11--chr5]""]" | chr11:64908991-chr5:147418570 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ATF7IP--YAP1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ATF7IP^ENSG00000171681.12 | chr12:14466287:+ | YAP1^ENSG00000137693.14 | chr11:102162456:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1345:33611:27413 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr12--chr11]""]" | chr12:14466287-chr11:102162456 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ATF6B--LINC01842 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ATF6B^ENSG00000213676.13 | chr6:32117323:- | LINC01842^ENSG00000267147.2 | chr19:14333791:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1371:51498:4979 | . | NO_LDAS | 0.0034 | GT | 1.5656 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr6--chr19]""]" | chr6:32117323-chr19:14333791 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ATF6B--KIAA2026 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ATF6B^ENSG00000213676.13 | chr6:32116480:- | KIAA2026^ENSG00000183354.12 | chr9:5968772:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1484:29258:3284 | . | NO_LDAS | 0.0034 | GT | 1.8295 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr6--chr9]""]" | chr6:32116480-chr9:5968772 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ATF4P1--PSME1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | ATF4P1^ENSG00000213338.3 | chrX:154622437:- | PSME1^ENSG00000092010.15 | chr14:24137700:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1215:26686:6171 | . | NO_LDAS | 0.0017 | GT | 0.9968 | AG | 1.5301 | "[""INTERCHROMOSOMAL[chrX--chr14]""]" | chrX:154622437-chr14:24137700 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ATF3--NENF | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ATF3^ENSG00000162772.17 | chr1:212608930:+ | NENF^ENSG00000117691.10 | chr1:212444339:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1230:9325:28086 | . | YES_LDAS | 0.0034 | GT | 1.6729 | AG | 1.8256 | "[""INTRACHROMOSOMAL[chr1:0.12Mb]""]" | chr1:212608930-chr1:212444339 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| ATF3--EIF4BP9 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ATF3^ENSG00000162772.17 | chr1:212618238:+ | EIF4BP9^ENSG00000237294.1 | chrX:66076321:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1201:43877:5428 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.5329 | "[""INTERCHROMOSOMAL[chr1--chrX]""]" | chr1:212618238-chrX:66076321 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ASPH--SMIM4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ASPH^ENSG00000198363.18 | chr8:61643386:- | SMIM4^ENSG00000168273.8 | chr3:52540424:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2241:12828:13919 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr8--chr3]""]" | chr8:61643386-chr3:52540424 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| ASPH--LINC01588 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ASPH^ENSG00000198363.18 | chr8:61680968:- | LINC01588^ENSG00000214900.11 | chr14:50042299:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2455:41312:6451 | . | NO_LDAS | 0.0034 | GC | 1.8323 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chr8--chr14]""]" | chr8:61680968-chr14:50042299 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ASPG--UBAP1L | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | ASPG^ENSG00000166183.16 | chr14:104092941:+ | UBAP1L^ENSG00000246922.9 | chr15:65102335:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1277:40633:2359 | . | NO_LDAS | 0.0017 | GT | 1.5219 | AG | 0.9183 | "[""INTERCHROMOSOMAL[chr14--chr15]""]" | chr14:104092941-chr15:65102335 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ASNSD1--ANKAR | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ASNSD1^ENSG00000138381.10 | chr2:189667945:+ | ANKAR^ENSG00000151687.14 | chr2:189689527:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1130:48707:6171 | . | NO_LDAS | 0.0034 | GT | 1.5329 | AG | 1.7465 | "[""INTRACHROMOSOMAL[chr2:0.00Mb]"",""NEIGHBORS[3459]""]" | chr2:189667945-chr2:189689527 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | ||||
| ARSL--FAM110A | 1 | 0 | 0.25 | 0.0 | INCL_NON_REF_SPLICE | ARSL^ENSG00000157399.16 | chrX:2949444:- | FAM110A^ENSG00000125898.13 | chr20:844833:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2206:12455:27259 | . | NO_LDAS | 0.0009 | GC | 1.3383 | AG | 1.053 | "[""INTERCHROMOSOMAL[chrX--chr20]""]" | chrX:2949444-chr20:844833 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ARRB2--PRPH | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ARRB2^ENSG00000141480.18 | chr17:4717752:+ | PRPH^ENSG00000135406.14 | chr12:49297393:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2250:37777:21206 | . | NO_LDAS | 0.0034 | GT | 1.371 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr17--chr12]""]" | chr17:4717752-chr12:49297393 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ARL8B--TMEM108 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ARL8B^ENSG00000134108.14 | chr3:5122288:+ | TMEM108^ENSG00000144868.14 | chr3:133381068:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1494:31346:20743 | . | NO_LDAS | 0.0034 | GT | 1.4256 | AG | 1.5656 | "[""INTRACHROMOSOMAL[chr3:127.86Mb]""]" | chr3:5122288-chr3:133381068 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ARL6IP4--ELOVL3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ARL6IP4^ENSG00000182196.13 | chr12:122980433:+ | ELOVL3^ENSG00000119915.5 | chr10:102229492:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1251:32535:26362 | . | NO_LDAS | 0.0034 | GT | 1.231 | AG | 1.2366 | "[""INTERCHROMOSOMAL[chr12--chr10]""]" | chr12:122980433-chr10:102229492 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ARL4D--RAB11FIP3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ARL4D^ENSG00000175906.5 | chr17:43400071:+ | RAB11FIP3^ENSG00000090565.17 | chr16:519760:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1486:25521:10570 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr17--chr16]""]" | chr17:43400071-chr16:519760 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ARID5B--IL17RD | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ARID5B^ENSG00000150347.17 | chr10:62091557:+ | IL17RD^ENSG00000144730.19 | chr3:57120313:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2279:41523:19258 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr10--chr3]""]" | chr10:62091557-chr3:57120313 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ARID4A--ARHGEF35-AS1 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | ARID4A^ENSG00000032219.19 | chr14:58298700:+ | ARHGEF35-AS1^ENSG00000244198.7 | chr7:144207693:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2126:31119:15783 | . | YES_LDAS | 0.0017 | GT | 1.8892 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr14--chr7]""]" | chr14:58298700-chr7:144207693 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| ARHGEF40--PCYT2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ARHGEF40^ENSG00000165801.10 | chr14:21081016:+ | PCYT2^ENSG00000185813.11 | chr17:81908972:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1211:11032:2906 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr14--chr17]""]" | chr14:21081016-chr17:81908972 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ARHGEF17--PAF1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ARHGEF17^ENSG00000110237.5 | chr11:73367732:+ | PAF1^ENSG00000006712.15 | chr19:39386398:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1150:23587:2709 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.3996 | "[""INTERCHROMOSOMAL[chr11--chr19]""]" | chr11:73367732-chr19:39386398 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ARHGAP8--RNF213 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ARHGAP8^ENSG00000241484.10 | chr22:44786606:+ | RNF213^ENSG00000173821.19 | chr17:80317188:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1140:18361:18403 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.6729 | "[""INTERCHROMOSOMAL[chr22--chr17]""]" | chr22:44786606-chr17:80317188 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| ARHGAP42--PICALM | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ARHGAP42^ENSG00000165895.19 | chr11:100687832:+ | PICALM^ENSG00000073921.18 | chr11:86031611:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1438:40204:14676 | . | YES_LDAS | 0.0034 | GT | 1.6402 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr11:14.62Mb]""]" | chr11:100687832-chr11:86031611 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| ARHGAP40--ARL8B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ARHGAP40^ENSG00000124143.10 | chr20:38623558:+ | ARL8B^ENSG00000134108.14 | chr3:5178664:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1228:41159:9323 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr20--chr3]""]" | chr20:38623558-chr3:5178664 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| ARHGAP15--KIDINS220 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ARHGAP15^ENSG00000075884.14 | chr2:143519364:+ | KIDINS220^ENSG00000134313.16 | chr2:8770832:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2467:47793:14087 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr2:134.25Mb]""]" | chr2:143519364-chr2:8770832 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| ARFGEF3--NF1P4 | 1 | 0 | 0.25 | 0.0 | INCL_NON_REF_SPLICE | ARFGEF3^ENSG00000112379.9 | chr6:138335188:+ | NF1P4^ENSG00000258027.2 | chr14:19498523:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2177:31054:27974 | . | NO_LDAS | 0.0009 | GT | 1.8062 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr6--chr14]""]" | chr6:138335188-chr14:19498523 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ARAP1--MEIS3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ARAP1^ENSG00000186635.15 | chr11:72721850:- | MEIS3^ENSG00000105419.18 | chr19:47417350:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1210:31629:1196 | . | YES_LDAS | 0.0034 | GT | 1.8295 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr11--chr19]""]" | chr11:72721850-chr19:47417350 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| APTX--LRIG1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | APTX^ENSG00000137074.20 | chr9:32987967:- | LRIG1^ENSG00000144749.14 | chr3:66386093:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2469:6752:23938 | . | NO_LDAS | 0.0017 | AT | 1.5058 | AC | 1.6729 | "[""INTERCHROMOSOMAL[chr9--chr3]""]" | chr9:32987967-chr3:66386093 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| APLP2--VIRMA | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | APLP2^ENSG00000084234.18 | chr11:130121799:+ | VIRMA^ENSG00000164944.12 | chr8:94529112:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1142:27276:28716 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.2729 | "[""INTERCHROMOSOMAL[chr11--chr8]""]" | chr11:130121799-chr8:94529112 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| APLP2--KRT18P14 | 1 | 0 | 0.07 | 0.0 | INCL_NON_REF_SPLICE | APLP2^ENSG00000084234.18 | chr11:130121799:+ | KRT18P14^ENSG00000186082.9 | chr11:35860878:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1492:40067:17100 | . | NO_LDAS | 0.0002 | GT | 1.7819 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr11:94.21Mb]""]" | chr11:130121799-chr11:35860878 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| AP1G2--PHF23 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | AP1G2^ENSG00000213983.12 | chr14:23564203:- | PHF23^ENSG00000040633.13 | chr17:7236169:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2167:51789:24457 | . | NO_LDAS | 0.0017 | GC | 1.2366 | AG | 0.9968 | "[""INTERCHROMOSOMAL[chr14--chr17]""]" | chr14:23564203-chr17:7236169 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| AP1B1--INTS5 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AP1B1^ENSG00000100280.17 | chr22:29334265:- | INTS5^ENSG00000185085.2 | chr11:62647597:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1334:29719:22635 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr22--chr11]""]" | chr22:29334265-chr11:62647597 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| AP006222.1--LRRFIP1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AP006222.1^ENSG00000228463.10 | chr1:289266:- | LRRFIP1^ENSG00000124831.19 | chr2:237772081:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1106:39994:16161 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.5546 | "[""INTERCHROMOSOMAL[chr1--chr2]""]" | chr1:289266-chr2:237772081 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| AP003555.2--PPFIA1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AP003555.2^ENSG00000255191.1 | chr11:69986166:+ | PPFIA1^ENSG00000131626.19 | chr11:70354301:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1487:4471:18193 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr11:0.25Mb]""]" | chr11:69986166-chr11:70354301 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| AP000787.1--SLC22A13 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AP000787.1^ENSG00000245552.7 | chr11:95151640:+ | SLC22A13^ENSG00000172940.13 | chr3:38275063:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1432:39921:27385 | . | NO_LDAS | 0.0034 | GT | 1.8295 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr11--chr3]""]" | chr11:95151640-chr3:38275063 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| AP000662.1--CLP1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AP000662.1^ENSG00000254602.2 | chr11:57638697:+ | CLP1^ENSG00000172409.7 | chr11:57659455:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2243:21638:17408 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr11:0.00Mb]"",""NEIGHBORS_OVERLAP:+:+:[4602]""]" | chr11:57638697-chr11:57659455 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | ||||
| AP000347.1--SFI1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AP000347.1^ENSG00000272578.5 | chr22:23659865:- | SFI1^ENSG00000198089.16 | chr22:31561290:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1131:4641:24793 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.7232 | "[""INTRACHROMOSOMAL[chr22:7.77Mb]""]" | chr22:23659865-chr22:31561290 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| AOX3P--NBPF19 | 1 | 0 | 0.2 | 0.0 | INCL_NON_REF_SPLICE | AOX3P^ENSG00000244301.6 | chr2:200717403:+ | NBPF19^ENSG00000271383.7 | chr1:149537100:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2303:35868:4363 | . | NO_LDAS | 0.0007 | GT | 1.8295 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr2--chr1]""]" | chr2:200717403-chr1:149537100 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| AOX3P--NBPF19 | 1 | 0 | 0.2 | 0.0 | INCL_NON_REF_SPLICE | AOX3P^ENSG00000244301.6 | chr2:200717403:+ | NBPF19^ENSG00000271383.7 | chr1:149532345:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2303:35868:4363 | . | NO_LDAS | 0.0007 | GT | 1.8295 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr2--chr1]""]" | chr2:200717403-chr1:149532345 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| AOX3P--NBPF19 | 1 | 0 | 0.2 | 0.0 | INCL_NON_REF_SPLICE | AOX3P^ENSG00000244301.6 | chr2:200717403:+ | NBPF19^ENSG00000271383.7 | chr1:149527614:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2303:35868:4363 | . | NO_LDAS | 0.0007 | GT | 1.8295 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr2--chr1]""]" | chr2:200717403-chr1:149527614 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| AOX3P--NBPF19 | 1 | 0 | 0.2 | 0.0 | INCL_NON_REF_SPLICE | AOX3P^ENSG00000244301.6 | chr2:200717403:+ | NBPF19^ENSG00000271383.7 | chr1:149522865:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2303:35868:4363 | . | NO_LDAS | 0.0007 | GT | 1.8295 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr2--chr1]""]" | chr2:200717403-chr1:149522865 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| AOX3P--NBPF19 | 1 | 0 | 0.2 | 0.0 | INCL_NON_REF_SPLICE | AOX3P^ENSG00000244301.6 | chr2:200717403:+ | NBPF19^ENSG00000271383.7 | chr1:149518110:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2303:35868:4363 | . | NO_LDAS | 0.0007 | GT | 1.8295 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr2--chr1]""]" | chr2:200717403-chr1:149518110 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| AOPEP--RNF38 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AOPEP^ENSG00000148120.17 | chr9:95080780:+ | RNF38^ENSG00000137075.18 | chr9:36376127:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2139:16096:10444 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr9:58.24Mb]""]" | chr9:95080780-chr9:36376127 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| ANXA8L1--AOPEP | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ANXA8L1^ENSG00000264230.9 | chr10:46375872:+ | AOPEP^ENSG00000148120.17 | chr9:94800757:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1258:45997:28072 | . | NO_LDAS | 0.0034 | GT | 1.8295 | AG | 1.5628 | "[""INTERCHROMOSOMAL[chr10--chr9]""]" | chr10:46375872-chr9:94800757 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| ANXA8--LANCL1-AS1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | ANXA8^ENSG00000265190.7 | chr10:47474305:- | LANCL1-AS1^ENSG00000234281.5 | chr2:210429367:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1382:30520:23462 | . | NO_LDAS | 0.0017 | GT | 1.9656 | AG | 1.3996 | "[""INTERCHROMOSOMAL[chr10--chr2]""]" | chr10:47474305-chr2:210429367 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ANXA2--MAPK11 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ANXA2^ENSG00000182718.18 | chr15:60402799:- | MAPK11^ENSG00000185386.15 | chr22:50265027:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1375:18693:18838 | . | NO_LDAS | 0.0034 | GT | 1.6895 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr15--chr22]""]" | chr15:60402799-chr22:50265027 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ANXA1--BAZ2B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ANXA1^ENSG00000135046.14 | chr9:73165209:+ | BAZ2B^ENSG00000123636.18 | chr2:159332686:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2250:7504:15881 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr9--chr2]""]" | chr9:73165209-chr2:159332686 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| ANPEP--ERAP1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ANPEP^ENSG00000166825.15 | chr15:89804253:- | ERAP1^ENSG00000164307.13 | chr5:96793513:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1150:35124:18403 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr15--chr5]""]" | chr15:89804253-chr5:96793513 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| ANKZF1--KDM5B | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ANKZF1^ENSG00000163516.14 | chr2:219229799:+ | KDM5B^ENSG00000117139.18 | chr1:202777094:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1296:46369:13135 | . | NO_LDAS | 0.0034 | GT | 1.5628 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr2--chr1]""]" | chr2:219229799-chr1:202777094 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ANKRD54--EIF3L | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ANKRD54^ENSG00000100124.15 | chr22:37843911:- | EIF3L^ENSG00000100129.18 | chr22:37886765:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1292:29072:1168 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr22:0.00Mb]"",""NEIGHBORS_OVERLAP:-:+:[459]""]" | chr22:37843911-chr22:37886765 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| ANKRD44--NCK2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ANKRD44^ENSG00000065413.20 | chr2:197099816:- | NCK2^ENSG00000071051.14 | chr2:105855048:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1137:14057:11481 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8295 | "[""INTRACHROMOSOMAL[chr2:91.07Mb]""]" | chr2:197099816-chr2:105855048 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| ANKRD27--CRIP1P2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ANKRD27^ENSG00000105186.16 | chr19:32615686:- | CRIP1P2^ENSG00000238225.1 | chr3:25686905:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1303:27398:25059 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr19--chr3]""]" | chr19:32615686-chr3:25686905 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ANKRD26--ANKRD36BP2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ANKRD26^ENSG00000107890.17 | chr10:27053320:- | ANKRD36BP2^ENSG00000230006.7 | chr2:88782734:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2467:9244:26881 | . | NO_LDAS | 0.0034 | GT | 1.6895 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr10--chr2]""]" | chr10:27053320-chr2:88782734 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| ANKRD16--SREBF2 | 1 | 0 | 0.14 | 0.0 | INCL_NON_REF_SPLICE | ANKRD16^ENSG00000134461.16 | chr10:5889067:- | SREBF2^ENSG00000198911.12 | chr22:41833304:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2153:46814:11691 | . | NO_LDAS | 0.0005 | GT | 1.1589 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr10--chr22]""]" | chr10:5889067-chr22:41833304 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ANKLE2--CCDC57 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ANKLE2^ENSG00000176915.15 | chr12:132756666:- | CCDC57^ENSG00000176155.19 | chr17:82188419:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1191:44815:13891 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr12--chr17]""]" | chr12:132756666-chr17:82188419 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| ANKHD1--PIWIL2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ANKHD1^ENSG00000131503.21 | chr5:140402273:+ | PIWIL2^ENSG00000197181.12 | chr8:22279341:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1153:4924:1939 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr5--chr8]""]" | chr5:140402273-chr8:22279341 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| ANK2--LARP7 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ANK2^ENSG00000145362.20 | chr4:113293538:+ | LARP7^ENSG00000174720.16 | chr4:112644668:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1166:20812:11972 | . | NO_LDAS | 0.0034 | GT | 0.971 | AG | 1.6402 | "[""INTRACHROMOSOMAL[chr4:0.16Mb]""]" | chr4:113293538-chr4:112644668 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| AMFR--ATAT1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AMFR^ENSG00000159461.15 | chr16:56385919:- | ATAT1^ENSG00000137343.18 | chr6:30646756:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1418:14138:29333 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr16--chr6]""]" | chr16:56385919-chr6:30646756 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| AMD1--LUC7L2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AMD1^ENSG00000123505.19 | chr6:110875215:+ | LUC7L2^ENSG00000146963.18 | chr7:139374401:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2405:43456:23700 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr6--chr7]""]" | chr6:110875215-chr7:139374401 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| ALS2--SUPT20HL1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ALS2^ENSG00000003393.16 | chr2:201710991:- | SUPT20HL1^ENSG00000223731.3 | chrX:24364806:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2275:1283:13485 | . | NO_LDAS | 0.0034 | GT | 1.231 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr2--chrX]""]" | chr2:201710991-chrX:24364806 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ALMS1--TNRC6B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ALMS1^ENSG00000116127.19 | chr2:73419318:+ | TNRC6B^ENSG00000100354.21 | chr22:40310817:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1172:41167:22985 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr2--chr22]""]" | chr2:73419318-chr22:40310817 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| ALMS1--DHX15 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ALMS1^ENSG00000116127.19 | chr2:73534949:+ | DHX15^ENSG00000109606.13 | chr4:24576502:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2152:35172:26054 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.4566 | "[""INTERCHROMOSOMAL[chr2--chr4]""]" | chr2:73534949-chr4:24576502 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| AL645638.1--UBE2D3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AL645638.1^ENSG00000232576.2 | chrX:88908526:+ | UBE2D3^ENSG00000109332.20 | chr4:102799500:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2215:12819:27105 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.2419 | "[""INTERCHROMOSOMAL[chrX--chr4]""]" | chrX:88908526-chr4:102799500 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| AL589740.1--E2F4 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AL589740.1^ENSG00000271860.7 | chr6:97816752:+ | E2F4^ENSG00000205250.9 | chr16:67195909:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2158:34153:20785 | . | NO_LDAS | 0.0034 | GT | 1.8062 | AG | 1.585 | "[""INTERCHROMOSOMAL[chr6--chr16]""]" | chr6:97816752-chr16:67195909 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| AL589182.3--SDCBP2 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | AL589182.3^ENSG00000286614.1 | chr14:19072549:+ | SDCBP2^ENSG00000125775.15 | chr20:1312624:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2209:30755:16778 | . | NO_LDAS | 0.0011 | GT | 1.8062 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr14--chr20]""]" | chr14:19072549-chr20:1312624 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| AL391807.1--RPGRIP1L | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AL391807.1^ENSG00000230910.4 | chr6:68632172:- | RPGRIP1L^ENSG00000103494.16 | chr16:53637809:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2166:49346:18740 | . | NO_LDAS | 0.0034 | GT | 1.3753 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr6--chr16]""]" | chr6:68632172-chr16:53637809 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| AL391056.1--ATAD5 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AL391056.1^ENSG00000227619.3 | chr9:129582768:+ | ATAD5^ENSG00000176208.9 | chr17:30837206:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1111:43780:26558 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr9--chr17]""]" | chr9:129582768-chr17:30837206 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| AL390860.1--TRIM58 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AL390860.1^ENSG00000235749.3 | chr1:247640433:+ | TRIM58^ENSG00000162722.9 | chr1:247860617:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1229:2739:22341 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9656 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr1:0.10Mb]"",""NEIGHBORS[95932]""]" | chr1:247640433-chr1:247860617 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | ||||
| AL390860.1--TRIM58 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AL390860.1^ENSG00000235749.3 | chr1:247640429:+ | TRIM58^ENSG00000162722.9 | chr1:247860617:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1366:13248:17394 | . | YES_LDAS | 0.0034 | GT | 1.9219 | AG | 1.9656 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr1:0.10Mb]"",""NEIGHBORS[95932]""]" | chr1:247640429-chr1:247860617 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 |
| AL390860.1--TADA1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AL390860.1^ENSG00000235749.3 | chr1:247640433:+ | TADA1^ENSG00000152382.6 | chr1:166858281:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1128:40625:15741 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.6895 | "[""INTRACHROMOSOMAL[chr1:80.76Mb]""]" | chr1:247640433-chr1:166858281 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| AL365356.2--RPL23AP42 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AL365356.2^ENSG00000228685.1 | chr10:5625040:+ | RPL23AP42^ENSG00000234851.4 | chr3:161429486:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1405:36903:17114 | . | NO_LDAS | 0.0034 | GT | 1.2729 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr10--chr3]""]" | chr10:5625040-chr3:161429486 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 1 | |||
| AL359258.2--NPAS2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AL359258.2^ENSG00000260879.1 | chr1:108199964:+ | NPAS2^ENSG00000170485.17 | chr2:100820245:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1238:17463:4321 | . | NO_LDAS | 0.0034 | GT | 1.6049 | AG | 0.971 | "[""INTERCHROMOSOMAL[chr1--chr2]""]" | chr1:108199964-chr2:100820245 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| AL359195.2--NPIPB10P | 1 | 0 | 0.12 | 0.0 | INCL_NON_REF_SPLICE | AL359195.2^ENSG00000279359.1 | chr10:80251084:+ | NPIPB10P^ENSG00000196796.5 | chr16:29052072:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1272:27932:23238 | . | NO_LDAS | 0.0004 | GT | 1.7465 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr10--chr16]""]" | chr10:80251084-chr16:29052072 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| AL160313.1--HHIPL1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AL160313.1^ENSG00000247970.2 | chr14:99625107:+ | HHIPL1^ENSG00000182218.10 | chr14:99652224:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1364:8135:25045 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.9899 | "[""INTRACHROMOSOMAL[chr14:0.02Mb]"",""NEIGHBORS[19389]""]" | chr14:99625107-chr14:99652224 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | ||||
| AL139383.1--STARD13 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AL139383.1^ENSG00000230490.3 | chr13:33439691:- | STARD13^ENSG00000133121.21 | chr13:33167622:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1158:32462:28534 | . | YES_LDAS | 0.0034 | GT | 1.6895 | AG | 1.6402 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr13:0.00Mb]"",""NEIGHBORS[4576]""]" | chr13:33439691-chr13:33167622 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 |
| AL139353.1--ZNF675 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AL139353.1^ENSG00000203546.7 | chr14:31453275:- | ZNF675^ENSG00000197372.10 | chr19:23534298:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2179:13952:12560 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr14--chr19]""]" | chr14:31453275-chr19:23534298 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 1 | |||
| AL135910.1--AL357141.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AL135910.1^ENSG00000272848.2 | chr6:169452245:- | AL357141.1^ENSG00000287933.1 | chr6:116046482:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1401:9082:14073 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.7056 | "[""INTRACHROMOSOMAL[chr6:53.38Mb]""]" | chr6:169452245-chr6:116046482 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| AL135818.1--SNX19 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AL135818.1^ENSG00000258875.6 | chr14:91244485:+ | SNX19^ENSG00000120451.11 | chr11:130906133:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1146:10312:22677 | . | NO_LDAS | 0.0034 | GT | 1.7968 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr14--chr11]""]" | chr14:91244485-chr11:130906133 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 1 | |||
| AL132712.2--PLCZ1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AL132712.2^ENSG00000287346.1 | chr14:103875093:+ | PLCZ1^ENSG00000139151.16 | chr12:18701641:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1415:12043:8721 | . | NO_LDAS | 0.0034 | GT | 1.6402 | AG | 0.9183 | "[""INTERCHROMOSOMAL[chr14--chr12]""]" | chr14:103875093-chr12:18701641 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| AL121974.1--ZNF808 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AL121974.1^ENSG00000235122.4 | chr6:49811593:+ | ZNF808^ENSG00000198482.14 | chr19:52553107:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1196:12682:25269 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.585 | "[""INTERCHROMOSOMAL[chr6--chr19]""]" | chr6:49811593-chr19:52553107 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| AL050309.1--KLF8 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AL050309.1^ENSG00000227486.2 | chrX:55908800:+ | KLF8^ENSG00000102349.18 | chrX:56265180:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1327:5280:18417 | . | YES_LDAS | 0.0034 | GT | 1.8062 | AG | 1.7465 | "[""INTRACHROMOSOMAL[chrX:0.02Mb]"",""NEIGHBORS[23085]""]" | chrX:55908800-chrX:56265180 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | ||||
| AL050309.1--KLF8 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AL050309.1^ENSG00000227486.2 | chrX:55908800:+ | KLF8^ENSG00000102349.18 | chrX:56250231:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2312:33077:2415 | . | YES_LDAS | 0.0034 | GT | 1.8062 | AG | 1.7968 | "[""INTRACHROMOSOMAL[chrX:0.02Mb]"",""NEIGHBORS[23085]""]" | chrX:55908800-chrX:56250231 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | ||||
| AL035699.1--PAPSS1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AL035699.1^ENSG00000288529.1 | chr6:133953425:+ | PAPSS1^ENSG00000138801.9 | chr4:107701285:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1256:43238:4125 | . | YES_LDAS | 0.0034 | GT | 1.4716 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chr6--chr4]""]" | chr6:133953425-chr4:107701285 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| AL035587.1--GNMT | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AL035587.1^ENSG00000231113.2 | chr6:42943970:+ | GNMT^ENSG00000124713.6 | chr6:42962212:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2287:50956:1687 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr6:0.01Mb]"",""NEIGHBORS[12394]""]" | chr6:42943970-chr6:42962212 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | ||||
| AL033384.1--MLIP | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AL033384.1^ENSG00000236740.6 | chr6:53930277:+ | MLIP^ENSG00000146147.15 | chr6:54121447:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1212:14235:8651 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.5219 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr6:0.02Mb]"",""NEIGHBORS[21249]""]" | chr6:53930277-chr6:54121447 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | ||||
| AL031846.2--SLC2A1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AL031846.2^ENSG00000279833.1 | chr22:39135376:+ | SLC2A1^ENSG00000117394.24 | chr1:42927150:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1110:9834:3382 | . | NO_LDAS | 0.0034 | GT | 1.6402 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr22--chr1]""]" | chr22:39135376-chr1:42927150 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| AKT1--TAC4 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AKT1^ENSG00000142208.17 | chr14:104777907:- | TAC4^ENSG00000176358.15 | chr17:49844118:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1202:4163:8777 | . | NO_LDAS | 0.0034 | GT | 1.4256 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr14--chr17]""]" | chr14:104777907-chr17:49844118 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| AHSA1--WTIP | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AHSA1^ENSG00000100591.8 | chr14:77468985:+ | WTIP^ENSG00000142279.13 | chr19:34500129:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1193:20772:7894 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr14--chr19]""]" | chr14:77468985-chr19:34500129 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| AHI1--LRGUK | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AHI1^ENSG00000135541.22 | chr6:135405735:- | LRGUK^ENSG00000155530.3 | chr7:134137023:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1244:29550:23602 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.5301 | "[""INTERCHROMOSOMAL[chr6--chr7]""]" | chr6:135405735-chr7:134137023 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| AHCYL1--RIN2 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | AHCYL1^ENSG00000168710.18 | chr1:109985132:+ | RIN2^ENSG00000132669.14 | chr20:19809296:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1381:43448:22705 | . | NO_LDAS | 0.0017 | GT | 1.5656 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr1--chr20]""]" | chr1:109985132-chr20:19809296 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| AHCYL1--ATP6V1G1P5 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | AHCYL1^ENSG00000168710.18 | chr1:109985132:+ | ATP6V1G1P5^ENSG00000270904.1 | chr5:151319509:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1381:43448:22705 | . | NO_LDAS | 0.0017 | GT | 1.5656 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr1--chr5]""]" | chr1:109985132-chr5:151319509 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| AGO2--RCOR3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AGO2^ENSG00000123908.12 | chr8:140635485:- | RCOR3^ENSG00000117625.14 | chr1:211303256:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2210:27932:2836 | . | NO_LDAS | 0.0034 | GT | 1.2867 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chr8--chr1]""]" | chr8:140635485-chr1:211303256 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| AGFG1--AMACR | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AGFG1^ENSG00000173744.18 | chr2:227552021:+ | AMACR^ENSG00000242110.8 | chr5:33986655:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1462:13523:18039 | . | NO_LDAS | 0.0034 | GT | 1.6402 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr2--chr5]""]" | chr2:227552021-chr5:33986655 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| AGAP10P--BMS1P7 | 1 | 0 | 0.11 | 0.0 | INCL_NON_REF_SPLICE | AGAP10P^ENSG00000230869.1 | chr10:45684520:+ | BMS1P7^ENSG00000270025.2 | chr10:48060020:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1243:10263:25592 | . | YES_LDAS | 0.0004 | GT | 1.7465 | AG | 1.9899 | "[""INTRACHROMOSOMAL[chr10:2.35Mb]""]" | chr10:45684520-chr10:48060020 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| AFF4--FER | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AFF4^ENSG00000072364.13 | chr5:132927121:- | FER^ENSG00000151422.13 | chr5:108867767:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1463:4422:21864 | . | NO_LDAS | 0.0034 | GT | 1.8256 | AG | 1.5329 | "[""INTRACHROMOSOMAL[chr5:23.68Mb]""]" | chr5:132927121-chr5:108867767 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| ADRA1B--RNF24 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ADRA1B^ENSG00000170214.5 | chr5:159972064:+ | RNF24^ENSG00000101236.17 | chr20:4015554:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1214:11185:21584 | . | NO_LDAS | 0.0034 | GT | 1.231 | AG | 1.5546 | "[""INTERCHROMOSOMAL[chr5--chr20]""]" | chr5:159972064-chr20:4015554 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ADPGK--R3HDM2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ADPGK^ENSG00000159322.17 | chr15:72760407:- | R3HDM2^ENSG00000179912.20 | chr12:57395818:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1232:12706:1518 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr15--chr12]""]" | chr15:72760407-chr12:57395818 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| ADH1B--ADH7 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ADH1B^ENSG00000196616.14 | chr4:99318785:- | ADH7^ENSG00000196344.11 | chr4:99428630:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2149:5741:17394 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9899 | "[""DGD_PARALOGS"",""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr4:0.06Mb]"",""LOCAL_REARRANGEMENT:-:[59501]""]" | chr4:99318785-chr4:99428630 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 |
| ADGRB1--BAG6 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ADGRB1^ENSG00000181790.11 | chr8:142526627:+ | BAG6^ENSG00000204463.13 | chr6:31647797:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1111:47097:10472 | . | NO_LDAS | 0.0034 | GT | 1.3383 | AG | 1.5546 | "[""INTERCHROMOSOMAL[chr8--chr6]""]" | chr8:142526627-chr6:31647797 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | ||||
| ADGRA1--AC138028.2 | 1 | 0 | 0.14 | 0.0 | INCL_NON_REF_SPLICE | ADGRA1^ENSG00000197177.15 | chr10:133088840:+ | AC138028.2^ENSG00000224888.4 | chr16:88738176:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1465:32705:21192 | . | NO_LDAS | 0.0005 | GC | 1.2419 | AG | 1.5546 | "[""INTERCHROMOSOMAL[chr10--chr16]""]" | chr10:133088840-chr16:88738176 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ADARB1--FGFR2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ADARB1^ENSG00000197381.16 | chr21:45074793:+ | FGFR2^ENSG00000066468.23 | chr10:121564579:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1138:13483:8833 | . | YES_LDAS | 0.0034 | GT | 1.6402 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr21--chr10]""]" | chr21:45074793-chr10:121564579 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| ADAMTS16--TUBB6 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ADAMTS16^ENSG00000145536.15 | chr5:5319134:+ | TUBB6^ENSG00000176014.13 | chr18:12310962:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2437:40641:28016 | . | NO_LDAS | 0.0034 | GT | 1.8256 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr5--chr18]""]" | chr5:5319134-chr18:12310962 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ADAM8--FAM83G | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ADAM8^ENSG00000151651.16 | chr10:133270376:- | FAM83G^ENSG00000188522.15 | chr17:18978739:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1285:23709:6311 | . | NO_LDAS | 0.0034 | GT | 1.4295 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr10--chr17]""]" | chr10:133270376-chr17:18978739 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ACVR1B--MARCKSL1 | 1 | 0 | 0.08 | 0.0 | INCL_NON_REF_SPLICE | ACVR1B^ENSG00000135503.13 | chr12:51951737:+ | MARCKSL1^ENSG00000175130.7 | chr1:32336250:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1269:41919:21178 | . | NO_LDAS | 0.0003 | GT | 1.1589 | AG | 1.231 | "[""INTERCHROMOSOMAL[chr12--chr1]""]" | chr12:51951737-chr1:32336250 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ACTR3C--AC092681.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ACTR3C^ENSG00000106526.10 | chr7:150284753:- | AC092681.1^ENSG00000224016.2 | chr7:149909705:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1450:48998:14158 | . | YES_LDAS | 0.0034 | GT | 1.9899 | AG | 1.9899 | "[""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr7:0.33Mb]""]" | chr7:150284753-chr7:149909705 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 |
| ACTG1P12--ACTBP11 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ACTG1P12^ENSG00000226642.1 | chr3:12070387:+ | ACTBP11^ENSG00000188460.4 | chr1:223864680:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1136:35560:5288 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.5656 | "[""INTERCHROMOSOMAL[chr3--chr1]""]" | chr3:12070387-chr1:223864680 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| ACSL6--TLE4 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ACSL6^ENSG00000164398.15 | chr5:131954095:- | TLE4^ENSG00000106829.20 | chr9:79627374:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2417:39929:15096 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr5--chr9]""]" | chr5:131954095-chr9:79627374 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ACSL3--PMS1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ACSL3^ENSG00000123983.15 | chr2:222934687:+ | PMS1^ENSG00000064933.18 | chr2:189791790:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1121:12383:26124 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr2:32.98Mb]""]" | chr2:222934687-chr2:189791790 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| ACP7--GALK2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ACP7^ENSG00000183760.11 | chr19:39085390:+ | GALK2^ENSG00000156958.15 | chr15:49195085:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1315:47283:13121 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr19--chr15]""]" | chr19:39085390-chr15:49195085 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| ACOT7--HIVEP1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ACOT7^ENSG00000097021.20 | chr1:6281102:- | HIVEP1^ENSG00000095951.17 | chr6:12015526:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1214:43610:29291 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr1--chr6]""]" | chr1:6281102-chr6:12015526 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| ACNATP--TAF1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ACNATP^ENSG00000227411.1 | chr9:101337866:- | TAF1^ENSG00000147133.16 | chrX:71460709:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1291:38141:27021 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr9--chrX]""]" | chr9:101337866-chrX:71460709 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ACCS--EXT2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ACCS^ENSG00000110455.14 | chr11:44081320:+ | EXT2^ENSG00000151348.15 | chr11:44107683:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1191:3977:3802 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.3996 | "[""Babiceanu_Normal"",""INTRACHROMOSOMAL[chr11:0.01Mb]"",""NEIGHBORS[11436]""]" | chr11:44081320-chr11:44107683 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | ||||
| ACACA--PITPNA | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ACACA^ENSG00000278540.5 | chr17:37358999:- | PITPNA^ENSG00000174238.15 | chr17:1548387:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2368:3152:1168 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr17:35.52Mb]""]" | chr17:37358999-chr17:1548387 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| AC245060.4--SEPTIN7 | 1 | 0 | 0.09 | 0.0 | ONLY_REF_SPLICE | AC245060.4^ENSG00000272779.1 | chr22:22310401:+ | SEPTIN7^ENSG00000122545.20 | chr7:35863552:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1287:32680:1897 | . | NO_LDAS | 0.0003 | GT | 1.9656 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr22--chr7]""]" | chr22:22310401-chr7:35863552 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| AC244669.2--MAN1A2 | 1 | 0 | 0.25 | 0.0 | ONLY_REF_SPLICE | AC244669.2^ENSG00000274642.1 | chr1:120197317:+ | MAN1A2^ENSG00000198162.12 | chr1:117466334:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1191:47307:24176 | . | YES_LDAS | 0.0009 | GT | 1.9329 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr1:2.67Mb]""]" | chr1:120197317-chr1:117466334 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| AC233699.1--TBC1D3 | 1 | 0 | 0.04 | 0.0 | ONLY_REF_SPLICE | AC233699.1^ENSG00000261499.2 | chr17:36320547:+ | TBC1D3^ENSG00000274611.3 | chr17:38191030:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1209:47849:3088 | . | YES_LDAS | 0.0001 | GT | 1.9329 | AG | 1.7465 | "[""INTRACHROMOSOMAL[chr17:1.86Mb]""]" | chr17:36320547-chr17:38191030 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| AC211476.4--CCDC146 | 1 | 0 | 0.12 | 0.0 | ONLY_REF_SPLICE | AC211476.4^ENSG00000277125.1 | chr7:73072670:+ | CCDC146^ENSG00000135205.15 | chr7:77167658:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1487:38788:3312 | . | YES_LDAS | 0.0004 | GT | 1.8323 | AG | 1.7465 | "[""INTRACHROMOSOMAL[chr7:4.05Mb]""]" | chr7:73072670-chr7:77167658 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| AC211433.1--OSMR | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC211433.1^ENSG00000232729.8 | chr7:74689122:- | OSMR^ENSG00000145623.13 | chr5:38845854:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1341:46684:24190 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr7--chr5]""]" | chr7:74689122-chr5:38845854 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| AC140063.1--VPS53 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC140063.1^ENSG00000255704.1 | chr12:131597035:- | VPS53^ENSG00000141252.21 | chr17:601896:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1372:6388:8006 | . | NO_LDAS | 0.0034 | GC | 1.9329 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr12--chr17]""]" | chr12:131597035-chr17:601896 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| AC139795.1--RSF1 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | AC139795.1^ENSG00000246596.7 | chr5:177626436:- | RSF1^ENSG00000048649.13 | chr11:77740936:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1476:39953:6451 | . | YES_LDAS | 0.0017 | GT | 1.6895 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr5--chr11]""]" | chr5:177626436-chr11:77740936 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| AC138393.1--AC015802.6 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | AC138393.1^ENSG00000229930.1 | chr1:224030704:- | AC015802.6^ENSG00000284526.1 | chr17:76564707:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1320:21945:13709 | . | NO_LDAS | 0.0011 | GT | 1.7819 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chr1--chr17]""]" | chr1:224030704-chr17:76564707 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 1 | |||
| AC136475.1--SMG1P4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC136475.1^ENSG00000251661.3 | chr11:318746:+ | SMG1P4^ENSG00000185710.9 | chr16:21892032:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1145:16055:8272 | . | NO_LDAS | 0.0034 | GT | 1.5058 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr11--chr16]""]" | chr11:318746-chr16:21892032 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| AC134878.2--NEPRO | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | AC134878.2^ENSG00000278212.2 | chrY:11212744:- | NEPRO^ENSG00000163608.15 | chr3:113014032:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1437:33368:25143 | . | YES_LDAS | 0.0017 | GT | 1.8892 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chrY--chr3]""]" | chrY:11212744-chr3:113014032 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| AC130466.1--DDX39B | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | AC130466.1^ENSG00000283213.1 | chr16:22806809:- | DDX39B^ENSG00000198563.14 | chr6:31530926:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1245:24582:9702 | . | NO_LDAS | 0.0017 | GT | 1.7465 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr16--chr6]""]" | chr16:22806809-chr6:31530926 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| AC129492.1--RBBP8 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC129492.1^ENSG00000214999.3 | chr17:8081167:+ | RBBP8^ENSG00000101773.19 | chr18:23016878:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1259:11477:7067 | . | NO_LDAS | 0.0034 | GT | 1.3383 | AG | 1.231 | "[""INTERCHROMOSOMAL[chr17--chr18]""]" | chr17:8081167-chr18:23016878 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| AC129492.1--AC099791.4 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC129492.1^ENSG00000214999.3 | chr17:8081167:+ | AC099791.4^ENSG00000287224.1 | chr1:61589095:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1171:51271:20029 | . | NO_LDAS | 0.0034 | GT | 1.3383 | AG | 0.971 | "[""INTERCHROMOSOMAL[chr17--chr1]""]" | chr17:8081167-chr1:61589095 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| AC129492.1--AC067942.2 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | AC129492.1^ENSG00000214999.3 | chr17:8081167:+ | AC067942.2^ENSG00000248113.2 | chr4:82580819:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1244:33845:12995 | . | NO_LDAS | 0.0017 | GT | 1.3383 | AG | 1.2867 | "[""INTERCHROMOSOMAL[chr17--chr4]""]" | chr17:8081167-chr4:82580819 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| AC127502.3--AC127502.1 | 1 | 0 | 0.25 | 0.0 | ONLY_REF_SPLICE | AC127502.3^ENSG00000283345.1 | chr15:30513698:+ | AC127502.1^ENSG00000215302.8 | chr15:30474356:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1418:22398:15755 | . | YES_LDAS | 0.0009 | GT | 1.5329 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr15:0.00Mb]"",""NEIGHBORS_OVERLAP:+:+:[246]""]" | chr15:30513698-chr15:30474356 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 |
| AC116914.1--CEP290 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC116914.1^ENSG00000262358.1 | chr17:3729469:+ | CEP290^ENSG00000198707.17 | chr12:88064740:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1179:37470:16834 | . | NO_LDAS | 0.0034 | GT | 1.8062 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr17--chr12]""]" | chr17:3729469-chr12:88064740 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| AC114808.1--PER1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC114808.1^ENSG00000235403.1 | chr2:1068226:- | PER1^ENSG00000179094.16 | chr17:8143817:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2108:43934:12981 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.5546 | "[""INTERCHROMOSOMAL[chr2--chr17]""]" | chr2:1068226-chr17:8143817 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| AC112698.1--FBL | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC112698.1^ENSG00000248376.2 | chr4:183419648:- | FBL^ENSG00000105202.9 | chr19:39840515:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1492:16371:4111 | . | YES_LDAS | 0.0034 | GT | 1.231 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr4--chr19]""]" | chr4:183419648-chr19:39840515 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| AC110753.1--SPDYE2 | 1 | 0 | 0.17 | 0.0 | INCL_NON_REF_SPLICE | AC110753.1^ENSG00000250609.1 | chr4:154524747:+ | SPDYE2^ENSG00000205238.9 | chr7:102553286:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1449:15222:26586 | . | NO_LDAS | 0.0006 | GT | 1.9656 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr4--chr7]""]" | chr4:154524747-chr7:102553286 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| AC108073.2--FAU | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC108073.2^ENSG00000241011.1 | chr4:188106914:+ | FAU^ENSG00000149806.11 | chr11:65121566:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1213:32106:9337 | . | NO_LDAS | 0.0034 | GT | 1.8062 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr4--chr11]""]" | chr4:188106914-chr11:65121566 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| AC107909.1--UQCRC2 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | AC107909.1^ENSG00000253532.1 | chr8:99120128:+ | UQCRC2^ENSG00000140740.11 | chr16:21971525:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2194:45681:17464 | . | NO_LDAS | 0.0017 | GT | 1.9899 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr8--chr16]""]" | chr8:99120128-chr16:21971525 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| AC106785.1--MMP24OS | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | AC106785.1^ENSG00000260522.1 | chr16:35722373:- | MMP24OS^ENSG00000126005.17 | chr20:35277869:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1164:45091:8342 | . | NO_LDAS | 0.0017 | GT | 1.5546 | AG | 1.4256 | "[""INTERCHROMOSOMAL[chr16--chr20]""]" | chr16:35722373-chr20:35277869 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| AC106028.3--UQCRC2 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | AC106028.3^ENSG00000260361.1 | chr15:92781429:- | UQCRC2^ENSG00000140740.11 | chr16:21971525:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2194:45681:17464 | . | NO_LDAS | 0.0017 | GT | 1.9899 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr15--chr16]""]" | chr15:92781429-chr16:21971525 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| AC102953.2--OSBPL5 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC102953.2^ENSG00000273230.1 | chr7:1464753:- | OSBPL5^ENSG00000021762.20 | chr11:3122253:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1151:49249:20729 | . | NO_LDAS | 0.0034 | GT | 0.6998 | AG | 1.5656 | "[""INTERCHROMOSOMAL[chr7--chr11]""]" | chr7:1464753-chr11:3122253 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| AC097518.2--AKT3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC097518.2^ENSG00000287544.1 | chr4:177220487:- | AKT3^ENSG00000117020.19 | chr1:243695716:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1105:10587:6759 | . | YES_LDAS | 0.0034 | GT | 1.6402 | AG | 1.2419 | "[""INTERCHROMOSOMAL[chr4--chr1]""]" | chr4:177220487-chr1:243695716 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| AC097467.3--ABCC9 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | AC097467.3^ENSG00000250910.8 | chr4:155354233:+ | ABCC9^ENSG00000069431.12 | chr12:21882870:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1398:28627:17941 | . | NO_LDAS | 0.0011 | GT | 1.9219 | AG | 1.3383 | "[""INTERCHROMOSOMAL[chr4--chr12]""]" | chr4:155354233-chr12:21882870 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| AC096582.2--SEPTIN14 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC096582.2^ENSG00000251378.1 | chr7:45818677:+ | SEPTIN14^ENSG00000154997.9 | chr7:55796092:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1403:20732:1911 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9899 | "[""INTRACHROMOSOMAL[chr7:9.97Mb]""]" | chr7:45818677-chr7:55796092 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| AC093599.1--TP53 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC093599.1^ENSG00000249022.2 | chr4:153091068:+ | TP53^ENSG00000141510.18 | chr17:7673837:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2126:50082:19734 | . | NO_LDAS | 0.0034 | GT | 1.8062 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr4--chr17]""]" | chr4:153091068-chr17:7673837 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| AC092803.1--COX5A | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC092803.1^ENSG00000260805.2 | chr1:212558848:- | COX5A^ENSG00000178741.12 | chr15:74929232:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2193:49087:4839 | . | NO_LDAS | 0.0034 | GT | 1.3996 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr1--chr15]""]" | chr1:212558848-chr15:74929232 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| AC092634.6--ZNF680 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC092634.6^ENSG00000278577.1 | chr7:63993999:+ | ZNF680^ENSG00000173041.12 | chr7:64544432:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1450:6129:17675 | . | NO_LDAS | 0.0034 | GT | 1.7056 | AG | 1.9899 | "[""INTRACHROMOSOMAL[chr7:0.53Mb]""]" | chr7:63993999-chr7:64544432 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| AC092634.1--ZNF726 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC092634.1^ENSG00000176232.10 | chr7:63980369:- | ZNF726^ENSG00000213967.11 | chr19:23919373:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1124:30787:25858 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr7--chr19]""]" | chr7:63980369-chr19:23919373 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| AC090772.3--SUCLA2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC090772.3^ENSG00000265750.1 | chr18:24159706:- | SUCLA2^ENSG00000136143.16 | chr13:47943445:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1136:25391:16708 | . | YES_LDAS | 0.0034 | GT | 1.7232 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr18--chr13]""]" | chr18:24159706-chr13:47943445 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| AC090517.5--ZNF280D | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC090517.5^ENSG00000285331.2 | chr15:56890014:- | ZNF280D^ENSG00000137871.21 | chr15:56682477:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1206:29542:10612 | . | NO_LDAS | 0.0034 | GT | 1.7465 | AG | 1.9219 | "[""INTRACHROMOSOMAL[chr15:0.06Mb]"",""NEIGHBORS[61374]""]" | chr15:56890014-chr15:56682477 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| AC087762.2--ZNF414 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC087762.2^ENSG00000279588.2 | chr15:100784514:- | ZNF414^ENSG00000133250.14 | chr19:8513116:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1118:24356:16596 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.4716 | "[""INTERCHROMOSOMAL[chr15--chr19]""]" | chr15:100784514-chr19:8513116 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| AC087741.3--MZT2A | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | AC087741.3^ENSG00000279259.1 | chr17:80147688:+ | MZT2A^ENSG00000173272.16 | chr2:131491844:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1351:19008:5876 | . | NO_LDAS | 0.0017 | GT | 1.3996 | AG | 1.1033 | "[""INTERCHROMOSOMAL[chr17--chr2]""]" | chr17:80147688-chr2:131491844 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| AC087521.3--SRC | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC087521.3^ENSG00000254409.3 | chr11:43971527:+ | SRC^ENSG00000197122.12 | chr20:37384150:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1415:25254:15713 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr11--chr20]""]" | chr11:43971527-chr20:37384150 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| AC087482.1--HMGN2P30 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | AC087482.1^ENSG00000259347.7 | chr15:67000813:- | HMGN2P30^ENSG00000213721.3 | chr7:42113446:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1214:30577:14144 | . | YES_LDAS | 0.0017 | GT | 1.8892 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr15--chr7]""]" | chr15:67000813-chr7:42113446 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| AC083899.1--REV1 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | AC083899.1^ENSG00000204745.4 | chr2:87193577:+ | REV1^ENSG00000135945.10 | chr2:99464985:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1137:21589:18585 | . | YES_LDAS | 0.0017 | GT | 1.8892 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr2:12.20Mb]""]" | chr2:87193577-chr2:99464985 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| AC080112.1--POLR3D | 1 | 0 | 0.11 | 0.0 | INCL_NON_REF_SPLICE | AC080112.1^ENSG00000266208.1 | chr17:40363839:+ | POLR3D^ENSG00000168495.13 | chr8:22250528:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2257:7237:28646 | . | NO_LDAS | 0.0004 | GT | 1.2419 | AG | 1.5546 | "[""INTERCHROMOSOMAL[chr17--chr8]""]" | chr17:40363839-chr8:22250528 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| AC080112.1--GAL3ST1 | 1 | 0 | 0.11 | 0.0 | INCL_NON_REF_SPLICE | AC080112.1^ENSG00000266208.1 | chr17:40363839:+ | GAL3ST1^ENSG00000128242.13 | chr22:30574486:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2257:7237:28646 | . | NO_LDAS | 0.0004 | GT | 1.2419 | AG | 1.2419 | "[""INTERCHROMOSOMAL[chr17--chr22]""]" | chr17:40363839-chr22:30574486 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| AC079781.5--GATAD2B | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC079781.5^ENSG00000284707.2 | chr7:97936947:- | GATAD2B^ENSG00000143614.10 | chr1:153828348:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1355:10045:7278 | . | YES_LDAS | 0.0034 | GT | 1.9219 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr7--chr1]""]" | chr7:97936947-chr1:153828348 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| AC079160.1--GON4L | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC079160.1^ENSG00000250546.6 | chr4:84008806:- | GON4L^ENSG00000116580.19 | chr1:155827028:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1155:16428:28058 | . | NO_LDAS | 0.0034 | GT | 1.7465 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr4--chr1]""]" | chr4:84008806-chr1:155827028 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| AC079142.1--ZMYM2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC079142.1^ENSG00000285679.2 | chrX:7929413:+ | ZMYM2^ENSG00000121741.17 | chr13:20051433:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1149:43578:24891 | . | YES_LDAS | 0.0034 | GT | 1.8062 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chrX--chr13]""]" | chrX:7929413-chr13:20051433 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| AC078852.2--CTBP1-AS | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | AC078852.2^ENSG00000254094.1 | chr4:1356716:+ | CTBP1-AS^ENSG00000280927.1 | chr4:1212717:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1496:15263:8272 | . | NO_LDAS | 0.0011 | GT | 1.7232 | AG | 1.371 | "[""INTRACHROMOSOMAL[chr4:0.14Mb]""]" | chr4:1356716-chr4:1212717 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| AC073861.1--CREBL2 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | AC073861.1^ENSG00000242299.1 | chr3:101576681:- | CREBL2^ENSG00000111269.3 | chr12:12612140:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2349:12650:21962 | . | YES_LDAS | 0.0017 | GT | 1.6402 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr3--chr12]""]" | chr3:101576681-chr12:12612140 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| AC072052.1--AC005840.1 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | AC072052.1^ENSG00000231359.3 | chr7:6491068:- | AC005840.1^ENSG00000213942.3 | chr12:6409977:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2410:8152:16582 | . | NO_LDAS | 0.0011 | GT | 1.5628 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr7--chr12]""]" | chr7:6491068-chr12:6409977 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| AC069544.1--DYNC1LI2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC069544.1^ENSG00000284024.4 | chr10:14845704:+ | DYNC1LI2^ENSG00000135720.13 | chr16:66742668:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1408:9503:24527 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr10--chr16]""]" | chr10:14845704-chr16:66742668 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| AC069120.1--FAM13B | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC069120.1^ENSG00000253361.3 | chr8:38543270:- | FAM13B^ENSG00000031003.10 | chr5:138018514:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1192:31661:16638 | . | NO_LDAS | 0.0034 | GT | 1.9899 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr8--chr5]""]" | chr8:38543270-chr5:138018514 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| AC068587.4--RABGAP1 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | AC068587.4^ENSG00000283674.3 | chr8:12601158:- | RABGAP1^ENSG00000011454.18 | chr9:123065348:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2353:31378:29571 | . | YES_LDAS | 0.0017 | GT | 1.3996 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr8--chr9]""]" | chr8:12601158-chr9:123065348 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| AC044810.2--S100A10 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC044810.2^ENSG00000254951.7 | chr11:7754405:- | S100A10^ENSG00000197747.9 | chr1:151986251:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1105:51085:9562 | . | NO_LDAS | 0.0034 | GT | 1.7968 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr11--chr1]""]" | chr11:7754405-chr1:151986251 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| AC044810.2--OVCH2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC044810.2^ENSG00000254951.7 | chr11:7905603:- | OVCH2^ENSG00000183378.12 | chr11:7704674:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2326:30957:27105 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8256 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr11:0.05Mb]"",""NEIGHBORS[47972]""]" | chr11:7905603-chr11:7704674 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 |
| AC027682.4--WWP2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC027682.4^ENSG00000261386.2 | chr16:67563295:- | WWP2^ENSG00000198373.13 | chr16:69840126:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1306:44783:21234 | . | YES_LDAS | 0.0034 | GT | 1.5058 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr16:2.20Mb]""]" | chr16:67563295-chr16:69840126 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| AC027682.4--LONRF1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC027682.4^ENSG00000261386.2 | chr16:67563295:- | LONRF1^ENSG00000154359.13 | chr8:12743282:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1474:16735:1154 | . | NO_LDAS | 0.0034 | GT | 1.5058 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr16--chr8]""]" | chr16:67563295-chr8:12743282 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| AC022154.1--NUP85 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC022154.1^ENSG00000268093.1 | chr19:48620799:- | NUP85^ENSG00000125450.11 | chr17:75231340:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2242:46150:13569 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr19--chr17]""]" | chr19:48620799-chr17:75231340 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| AC021188.1--ZNF710 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC021188.1^ENSG00000230747.1 | chr2:96321413:- | ZNF710^ENSG00000140548.10 | chr15:90001436:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2406:7998:4209 | . | NO_LDAS | 0.0034 | GT | 1.2419 | AG | 0.971 | "[""INTERCHROMOSOMAL[chr2--chr15]""]" | chr2:96321413-chr15:90001436 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| AC019080.1--NBPF9 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC019080.1^ENSG00000213963.6 | chr2:177283991:- | NBPF9^ENSG00000269713.7 | chr1:149071676:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2408:52056:11467 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr2--chr1]""]" | chr2:177283991-chr1:149071676 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| AC018697.1--MARCKSL1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC018697.1^ENSG00000266573.6 | chr18:24985428:+ | MARCKSL1^ENSG00000175130.7 | chr1:32334917:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1450:14729:4013 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr18--chr1]""]" | chr18:24985428-chr1:32334917 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| AC016629.1--RPL23AP82 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | AC016629.1^ENSG00000269032.1 | chr19:58586356:+ | RPL23AP82^ENSG00000184319.16 | chr22:50788750:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1147:34986:23770 | . | YES_LDAS | 0.0017 | GT | 1.7819 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr19--chr22]""]" | chr19:58586356-chr22:50788750 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | ||||
| AC016597.1--LGALS3 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | AC016597.1^ENSG00000261329.6 | chr16:27685266:- | LGALS3^ENSG00000131981.16 | chr14:55137370:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1155:40981:2766 | . | NO_LDAS | 0.0017 | GT | 1.9329 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr16--chr14]""]" | chr16:27685266-chr14:55137370 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| AC016026.1--LTBR | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC016026.1^ENSG00000093100.13 | chr22:17808844:- | LTBR^ENSG00000111321.11 | chr12:6375512:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1106:34323:14550 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr22--chr12]""]" | chr22:17808844-chr12:6375512 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| AC015712.1--CLASP2 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | AC015712.1^ENSG00000232386.9 | chr15:100855348:+ | CLASP2^ENSG00000163539.17 | chr3:33696933:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2456:8419:1631 | . | YES_LDAS | 0.0017 | GT | 1.9329 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr15--chr3]""]" | chr15:100855348-chr3:33696933 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| AC013268.1--EIF3E | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | AC013268.1^ENSG00000186148.13 | chr2:109937583:+ | EIF3E^ENSG00000104408.11 | chr8:108201923:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1459:10190:21038 | . | NO_LDAS | 0.0017 | GT | 1.7819 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr2--chr8]""]" | chr2:109937583-chr8:108201923 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| AC012443.1--RPL22 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | AC012443.1^ENSG00000270776.1 | chr2:152539305:- | RPL22^ENSG00000116251.11 | chr1:6193051:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1481:8904:20659 | . | NO_LDAS | 0.0017 | GT | 1.9656 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr2--chr1]""]" | chr2:152539305-chr1:6193051 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| AC012414.6--FOXN3 | 1 | 0 | 0.17 | 0.0 | INCL_NON_REF_SPLICE | AC012414.6^ENSG00000274499.1 | chr15:20803791:- | FOXN3^ENSG00000053254.16 | chr14:89350808:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1294:1356:4223 | . | NO_LDAS | 0.0006 | GT | 1.8295 | AG | 1.5058 | "[""INTERCHROMOSOMAL[chr15--chr14]""]" | chr15:20803791-chr14:89350808 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| AC012236.1--PLD2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC012236.1^ENSG00000259772.6 | chr15:31223650:- | PLD2^ENSG00000129219.14 | chr17:4808138:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1168:13912:5876 | . | NO_LDAS | 0.0034 | GC | 1.3383 | AG | 1.1589 | "[""INTERCHROMOSOMAL[chr15--chr17]""]" | chr15:31223650-chr17:4808138 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| AC012213.1--CLASP2 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | AC012213.1^ENSG00000253477.5 | chr8:103487561:- | CLASP2^ENSG00000163539.17 | chr3:33696933:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2456:8419:1631 | . | YES_LDAS | 0.0017 | GT | 1.9329 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr8--chr3]""]" | chr8:103487561-chr3:33696933 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| AC011450.1--SLC6A16 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC011450.1^ENSG00000197813.6 | chr19:49340231:- | SLC6A16^ENSG00000063127.16 | chr19:49294553:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2164:33449:7628 | . | YES_LDAS | 0.0034 | GT | 1.2867 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr19:0.01Mb]"",""NEIGHBORS[6310]""]" | chr19:49340231-chr19:49294553 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | ||||
| AC011416.2--ATP5F1B | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | AC011416.2^ENSG00000250956.1 | chr5:127179782:- | ATP5F1B^ENSG00000110955.9 | chr12:56645199:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2207:7901:19230 | . | NO_LDAS | 0.0017 | GT | 1.8295 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chr5--chr12]""]" | chr5:127179782-chr12:56645199 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| AC010343.1--HECW2-AS1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC010343.1^ENSG00000240376.1 | chr5:33162224:+ | HECW2-AS1^ENSG00000229056.2 | chr2:196260479:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2260:9948:22607 | . | NO_LDAS | 0.0034 | GC | 1.5656 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr5--chr2]""]" | chr5:33162224-chr2:196260479 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| AC009879.4--EHMT1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC009879.4^ENSG00000287127.1 | chr8:66432324:- | EHMT1^ENSG00000181090.21 | chr9:137717070:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2152:46563:16273 | . | NO_LDAS | 0.0034 | GC | 1.6729 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr8--chr9]""]" | chr8:66432324-chr9:137717070 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| AC009120.2--TSSK1B | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | AC009120.2^ENSG00000259972.3 | chr16:74305287:- | TSSK1B^ENSG00000212122.4 | chr5:113435002:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2206:39694:8300 | . | NO_LDAS | 0.0017 | GT | 1.7232 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr16--chr5]""]" | chr16:74305287-chr5:113435002 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| AC008708.2--TOP1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC008708.2^ENSG00000254187.1 | chr5:167653608:- | TOP1^ENSG00000198900.7 | chr20:41076205:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1290:43141:21500 | . | NO_LDAS | 0.0034 | GT | 1.4256 | AG | 1.3383 | "[""INTERCHROMOSOMAL[chr5--chr20]""]" | chr5:167653608-chr20:41076205 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| AC008280.2--PTGR1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC008280.2^ENSG00000272156.1 | chr2:54084970:+ | PTGR1^ENSG00000106853.20 | chr9:111574830:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2111:12091:17829 | . | NO_LDAS | 0.0034 | GT | 1.5656 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr2--chr9]""]" | chr2:54084970-chr9:111574830 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| AC008013.1--KDM2A | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC008013.1^ENSG00000226472.8 | chr12:30988464:- | KDM2A^ENSG00000173120.15 | chr11:67180079:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2163:42736:4853 | . | NO_LDAS | 0.0034 | GC | 1.9329 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr12--chr11]""]" | chr12:30988464-chr11:67180079 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 |
| AC007952.1--FAS | 1 | 0 | 0.25 | 0.0 | INCL_NON_REF_SPLICE | AC007952.1^ENSG00000197665.7 | chr17:19158291:- | FAS^ENSG00000026103.22 | chr10:88991213:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1104:6566:7670 | . | NO_LDAS | 0.0009 | GT | 1.8892 | AG | 1.2419 | "[""INTERCHROMOSOMAL[chr17--chr10]""]" | chr17:19158291-chr10:88991213 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| AC006581.2--PTK7 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | AC006581.2^ENSG00000282022.1 | chr12:8858218:- | PTK7^ENSG00000112655.16 | chr6:43132042:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1147:26880:17689 | . | NO_LDAS | 0.0011 | GT | 1.6895 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr12--chr6]""]" | chr12:8858218-chr6:43132042 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| AC006013.1--MYO6 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC006013.1^ENSG00000236531.2 | chr7:68091325:+ | MYO6^ENSG00000196586.16 | chr6:75891228:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1385:11663:9576 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr7--chr6]""]" | chr7:68091325-chr6:75891228 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | ||||
| AC005871.1--TUBGCP4 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | AC005871.1^ENSG00000235198.1 | chr10:117572345:- | TUBGCP4^ENSG00000137822.13 | chr15:43404398:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1155:38368:7684 | . | NO_LDAS | 0.0017 | GT | 1.9656 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chr10--chr15]""]" | chr10:117572345-chr15:43404398 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| AC004980.3--AC004951.2 | 1 | 0 | 0.08 | 0.0 | INCL_NON_REF_SPLICE | AC004980.3^ENSG00000230305.2 | chr7:76527852:+ | AC004951.2^ENSG00000239556.4 | chr7:43988247:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1115:9082:2107 | . | YES_LDAS | 0.0003 | GT | 1.9086 | AG | 1.7465 | "[""INTRACHROMOSOMAL[chr7:32.53Mb]""]" | chr7:76527852-chr7:43988247 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| AC004801.2--RPL37 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC004801.2^ENSG00000240399.1 | chr12:48055121:- | RPL37^ENSG00000145592.14 | chr5:40834265:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1443:48448:27161 | . | NO_LDAS | 0.0034 | GT | 1.6895 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr12--chr5]""]" | chr12:48055121-chr5:40834265 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | ||||
| AC002116.2--WDR62 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC002116.2^ENSG00000267698.1 | chr19:36019384:+ | WDR62^ENSG00000075702.19 | chr19:36058780:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2151:25375:13681 | . | YES_LDAS | 0.0034 | GT | 1.585 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr19:0.01Mb]"",""NEIGHBORS[8677]""]" | chr19:36019384-chr19:36058780 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | ||||
| ABCD1--ABCD2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ABCD1^ENSG00000101986.12 | chrX:153743346:+ | ABCD2^ENSG00000173208.4 | chr12:39554131:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2279:46919:20477 | . | NO_LDAS | 0.0034 | GT | 1.4566 | AG | 1.5329 | "[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chrX--chr12]""]" | chrX:153743346-chr12:39554131 | False | 0 | Excluded | annotation | pattern: | HGNC_GENEFAM | FAIL | 1 | |||
| ABCC5--LINC01940 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ABCC5^ENSG00000114770.17 | chr3:183967695:- | LINC01940^ENSG00000227744.4 | chr2:238924137:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1265:10465:13723 | . | NO_LDAS | 0.0034 | GT | 1.9899 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr3--chr2]""]" | chr3:183967695-chr2:238924137 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | ||||
| ABCC1--CDK5RAP1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ABCC1^ENSG00000103222.20 | chr16:16079478:+ | CDK5RAP1^ENSG00000101391.21 | chr20:33360491:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1392:37397:26236 | . | YES_LDAS | 0.0034 | GT | 1.9899 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr16--chr20]""]" | chr16:16079478-chr20:33360491 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| ABCA11P--RNF213 | 1 | 0 | 0.12 | 0.0 | ONLY_REF_SPLICE | ABCA11P^ENSG00000251595.7 | chr4:472575:- | RNF213^ENSG00000173821.19 | chr17:80325030:+ | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1251:29226:17464 | . | YES_LDAS | 0.0004 | GT | 1.8892 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr4--chr17]""]" | chr4:472575-chr17:80325030 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 |
| AARS2--SCNN1A | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AARS2^ENSG00000124608.5 | chr6:44306935:- | SCNN1A^ENSG00000111319.13 | chr12:6374708:- | &SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1451:23911:28660 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.5546 | "[""INTERCHROMOSOMAL[chr6--chr12]""]" | chr6:44306935-chr12:6374708 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 |
1582 rows