-ctat genome lib [/tmp/nxf.hcQnTjIbJB/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.hcQnTjIbJB/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.hcQnTjIbJB/./star-fusion.preliminary
-sample contains 293914112 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes --genome_lib_dir /tmp/nxf.hcQnTjIbJB/ctat_genome_lib_build_dir -J /tmp/nxf.hcQnTjIbJB/EndoN_FFPE_L09_RNA_01_B23LG7FLT4_1.Chimeric.out.junction -O /tmp/nxf.hcQnTjIbJB/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4
-parsing fusion evidence: /tmp/nxf.hcQnTjIbJB/EndoN_FFPE_L09_RNA_01_B23LG7FLT4_1.Chimeric.out.junction
-building interval tree based on /tmp/nxf.hcQnTjIbJB/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes
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[2710000], rate=9-building interval tree based on /tmp/nxf.hcQnTjIbJB/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes
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[3430000], rate=58917.84/min -building interval tree based on /tmp/nxf.hcQnTjIbJB/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes
[10000], rate=120000.00/min
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[3400000], rate=51895.19/min
[3410000], rate=51863.12/min -building interval tree based on /tmp/nxf.hcQnTjIbJB/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes
[10000], rate=66666.67/min
[20000], rate=70588.24/min
[30000], rate=69230.77/min
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.00/min
[2680000], rate=43283.98/min
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[3400000], rate=38702.33/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads -J /tmp/nxf.hcQnTjIbJB/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --genome_lib_dir /tmp/nxf.hcQnTjIbJB/ctat_genome_lib_build_dir --filt_file /tmp/nxf.hcQnTjIbJB/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail -M 50 > /tmp/nxf.hcQnTjIbJB/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-parsing /tmp/nxf.hcQnTjIbJB/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.
6000000.00 reads per min processed...
12000000.00 reads per min processed...
18000000.00 reads per min processed...
12000000.00 reads per min processed...
15000000.00 reads per min processed...
12000000.00 reads per min processed...
14000000.00 reads per min processed...
16000000.00 reads per min processed...
13500000.00 reads per min processed...
15000000.00 reads per min processed...
13200000.00 reads per min processed...
12000000.00 reads per min processed...
11142857.14 reads per min processed...
9333333.33 reads per min processed...
9000000.00 reads per min processed...
8727272.73 reads per min processed...
8500000.00 reads per min processed...
7714285.71 reads per min processed...
7600000.00 reads per min processed...
7500000.00 reads per min processed...
7411764.71 reads per min processed...
7333333.33 reads per min processed...
7263157.89 reads per min processed...
6857142.86 reads per min processed...
6818181.82 reads per min processed...
6782608.70 reads per min processed...
6750000.00 reads per min processed...
6720000.00 reads per min processed...
6692307.69 reads per min processed...
6428571.43 reads per min processed...
6413793.10 reads per min processed...
6400000.00 reads per min processed...
6387096.77 reads per min processed...
6375000.00 reads per min processed...
6363636.36 reads per min processed...
6171428.57 reads per min processed...
6166666.67 reads per min processed...
6162162.16 reads per min processed...
6157894.74 reads per min processed...
6000000.00 reads per min processed...
5857142.86 reads per min processed...
5860465.12 reads per min processed...
5733333.33 reads per min processed...
5739130.43 reads per min processed...
5744680.85 reads per min processed...
5750000.00 reads per min processed...
5640000.00 reads per min processed...
5647058.82 reads per min processed...
5653846.15 reads per min processed...
5660377.36 reads per min processed...
5666666.67 reads per min processed...
5672727.27 reads per min processed...
5678571.43 reads per min processed...
5684210.53 reads per min processed...
5593220.34 reads per min processed...
5600000.00 reads per min processed...
5606557.38 reads per min processed...
5612903.23 reads per min processed...
5619047.62 reads per min processed...
5625000.00 reads per min processed...
5630769.23 reads per min processed...
5636363.64 reads per min processed...
5641791.04 reads per min processed...
5647058.82 reads per min processed...
5652173.91 reads per min processed...
5577464.79 reads per min processed...
5661971.83 reads per min processed...
5746478.87 reads per min processed...
5750000.00 reads per min processed...
5833333.33 reads per min processed...
5835616.44 reads per min processed...
5917808.22 reads per min processed...
5918918.92 reads per min processed...
6000000.00 reads per min processed...
6081081.08 reads per min processed...
6080000.00 reads per min processed...
6160000.00 reads per min processed...
6157894.74 reads per min processed...
6236842.11 reads per min processed...
6233766.23 reads per min processed...
6230769.23 reads per min processed...
6150000.00 reads per min processed...
6148148.15 reads per min processed...
6146341.46 reads per min processed...
6144578.31 reads per min processed...
6142857.14 reads per min processed...
6141176.47 reads per min processed...
6139534.88 reads per min processed...
6137931.03 reads per min processed...
6136363.64 reads per min processed...
6134831.46 reads per min processed...
6133333.33 reads per min processed...
6065217.39 reads per min processed...
6064516.13 reads per min processed...
6063829.79 reads per min processed...
6063157.89 reads per min processed...
6062500.00 reads per min processed...
6061855.67 reads per min processed...
6000000.00 reads per min processed...
6000000.00 reads per min processed...
6000000.00 reads per min processed...
6000000.00 reads per min processed...
6000000.00 reads per min processed...
6000000.00 reads per min processed...
6000000.00 reads per min processed...
6000000.00 reads per min processed...
6000000.00 reads per min processed...
5944954.13 reads per min processed...
5945454.55 reads per min processed...
5945945.95 reads per min processed...
5946428.57 reads per min processed...
5946902.65 reads per min processed...
5947368.42 reads per min processed...
5947826.09 reads per min processed...
done.
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict -J /tmp/nxf.hcQnTjIbJB/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -O /tmp/nxf.hcQnTjIbJB/./star-fusion.preliminary/star-fusion
-parsing fusion evidence: /tmp/nxf.hcQnTjIbJB/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.hcQnTjIbJB/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter --fusion_preds /tmp/nxf.hcQnTjIbJB/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary -J /tmp/nxf.hcQnTjIbJB/EndoN_FFPE_L09_RNA_01_B23LG7FLT4_1.Chimeric.out.junction --tmpdir /tmp --min_junction_reads 0 --min_sum_frags 1 --require_LDAS 0 --max_promiscuity 10 --min_pct_dom_promiscuity 20 --min_novel_junction_support 1 --min_alt_pct_junction 10 --aggregate_novel_junction_dist 5 --min_spanning_frags_only 1 --genome_lib_dir /tmp/nxf.hcQnTjIbJB/ctat_genome_lib_build_dir --out_prefix /tmp/nxf.hcQnTjIbJB/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.hcQnTjIbJB/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -313683.068650
EM: Round [1] log likelihood: -313314.462047
EM: Round [2] log likelihood: -313176.841271
EM: Round [3] log likelihood: -313111.643914
EM: Round [4] log likelihood: -313077.224226
EM: Round [5] log likelihood: -313057.908155
EM: Round [6] log likelihood: -313046.520553
EM: Round [7] log likelihood: -313039.481377
EM: Round [8] log likelihood: -313034.925700
EM: Round [9] log likelihood: -313031.848553
EM: Round [10] log likelihood: -313029.688845
EM: Round [11] log likelihood: -313028.121292
EM: Round [12] log likelihood: -313026.950020
EM: Round [13] log likelihood: -313026.052698
EM: Round [14] log likelihood: -313025.350279
EM: Round [15] log likelihood: -313024.790083
EM: Round [16] log likelihood: -313024.336005
EM: Round [17] log likelihood: -313023.962679
EM: Round [18] log likelihood: -313023.651887
EM: Round [19] log likelihood: -313023.390284
EM: Round [20] log likelihood: -313023.167917
EM: Round [21] log likelihood: -313022.977248
EM: Round [22] log likelihood: -313022.812483
EM: Round [23] log likelihood: -313022.669108
EM: Round [24] log likelihood: -313022.543565
EM: Round [25] log likelihood: -313022.433019
EM: Round [26] log likelihood: -313022.335184
EM: Round [27] log likelihood: -313022.248203
EM: Round [28] log likelihood: -313022.170550
EM: Round [29] log likelihood: -313022.100965
EM: Round [30] log likelihood: -313022.038394
EM: Round [31] log likelihood: -313021.981955
EM: Round [32] log likelihood: -313021.930902
EM: Round [33] log likelihood: -313021.884598
EM: Round [34] log likelihood: -313021.842500
EM: Round [35] log likelihood: -313021.804141
EM: Round [36] log likelihood: -313021.769116
EM: Round [37] log likelihood: -313021.737073
EM: Round [38] log likelihood: -313021.707707
EM: Round [39] log likelihood: -313021.680749
EM: Round [40] log likelihood: -313021.655961
EM: Round [41] log likelihood: -313021.633137
EM: Round [42] log likelihood: -313021.612090
EM: Round [43] log likelihood: -313021.592658
EM: Round [44] log likelihood: -313021.574692
EM: Round [45] log likelihood: -313021.558064
EM: Round [46] log likelihood: -313021.542655
EM: Round [47] log likelihood: -313021.528361
EM: Round [48] log likelihood: -313021.515087
EM: Round [49] log likelihood: -313021.502747
EM: Round [50] log likelihood: -313021.491265
EM: Round [51] log likelihood: -313021.480570
EM: Round [52] log likelihood: -313021.470599
EM: Round [53] log likelihood: -313021.461295
EM: Round [54] log likelihood: -313021.452605
EM: Round [55] log likelihood: -313021.444482
EM: Round [56] log likelihood: -313021.436882
EM: Round [57] log likelihood: -313021.429766
EM: Round [58] log likelihood: -313021.423097
EM: Round [59] log likelihood: -313021.416842
EM: Round [60] log likelihood: -313021.410970
EM: Round [61] log likelihood: -313021.405453
EM: Round [62] log likelihood: -313021.400267
EM: Round [63] log likelihood: -313021.395386
EM: Round [64] log likelihood: -313021.390790
EM: Round [65] log likelihood: -313021.386459
EM: Round [66] log likelihood: -313021.382374
EM: Round [67] log likelihood: -313021.378518
EM: Round [68] log likelihood: -313021.374876
EM: Round [69] log likelihood: -313021.371432
EM: Round [70] log likelihood: -313021.368175
EM: Round [71] log likelihood: -313021.365090
EM: Round [72] log likelihood: -313021.362168
EM: Round [73] log likelihood: -313021.359397
EM: Round [74] log likelihood: -313021.356767
EM: Round [75] log likelihood: -313021.354270
EM: Round [76] log likelihood: -313021.351897
EM: Round [77] log likelihood: -313021.349640
EM: Round [78] log likelihood: -313021.347492
EM: Round [79] log likelihood: -313021.345446
EM: Round [80] log likelihood: -313021.343496
EM: Round [81] log likelihood: -313021.341636
EM: Round [82] log likelihood: -313021.339861
EM: Round [83] log likelihood: -313021.338165
EM: Round [84] log likelihood: -313021.336544
EM: Round [85] log likelihood: -313021.334993
EM: Round [86] log likelihood: -313021.333509
EM: Round [87] log likelihood: -313021.332088
EM: Round [88] log likelihood: -313021.330725
EM: Round [89] log likelihood: -313021.329418
EM: Round [90] log likelihood: -313021.328164
EM: Round [91] log likelihood: -313021.326959
EM: Round [92] log likelihood: -313021.325802
EM: Round [93] log likelihood: -313021.324689
EM: Round [94] log likelihood: -313021.323617
EM: Round [95] log likelihood: -313021.322586
EM: Round [96] log likelihood: -313021.321592
EM: Round [97] log likelihood: -313021.320634
EM: Round [98] log likelihood: -313021.319710
EM: Round [99] log likelihood: -313021.318819
EM: Round [100] log likelihood: -313021.317957
EM: Round [101] log likelihood: -313021.317125
EM: Round [102] log likelihood: -313021.316321
EM: Round [103] log likelihood: -313021.315543
EM: Round [104] log likelihood: -313021.314790
EM: Round [105] log likelihood: -313021.314061
EM: Round [106] log likelihood: -313021.313355
EM: Round [107] log likelihood: -313021.312670
EM: Round [108] log likelihood: -313021.312006
EM: Round [109] log likelihood: -313021.311362
EM: Round [110] log likelihood: -313021.310737
EM: Round [111] log likelihood: -313021.310130
EM: Round [112] log likelihood: -313021.309541
EM: Round [113] log likelihood: -313021.308968
EM: Round [114] log likelihood: -313021.308411
EM: Round [115] log likelihood: -313021.307869
EM: Round [116] log likelihood: -313021.307342
EM: Round [117] log likelihood: -313021.306829
EM: Round [118] log likelihood: -313021.306329
EM: Round [119] log likelihood: -313021.305843
EM: Round [120] log likelihood: -313021.305369
EM: Round [121] log likelihood: -313021.304907
EM: Round [122] log likelihood: -313021.304456
EM: Round [123] log likelihood: -313021.304016
EM: Round [124] log likelihood: -313021.303588
EM: Round [125] log likelihood: -313021.303169
EM: Round [126] log likelihood: -313021.302761
EM: Round [127] log likelihood: -313021.302362
EM: Round [128] log likelihood: -313021.301973
EM: Round [129] log likelihood: -313021.301592
EM: Round [130] log likelihood: -313021.301220
EM: Round [131] log likelihood: -313021.300857
EM: Round [132] log likelihood: -313021.300502
EM: Round [133] log likelihood: -313021.300154
EM: Round [134] log likelihood: -313021.299814
EM: Round [135] log likelihood: -313021.299482
EM: Round [136] log likelihood: -313021.299157
EM: Round [137] log likelihood: -313021.298839
EM: Round [138] log likelihood: -313021.298527
EM: Round [139] log likelihood: -313021.298222
EM: Round [140] log likelihood: -313021.297924
EM: Round [141] log likelihood: -313021.297631
EM: Round [142] log likelihood: -313021.297345
EM: Round [143] log likelihood: -313021.297064
EM: Round [144] log likelihood: -313021.296790
EM: Round [145] log likelihood: -313021.296520
EM: Round [146] log likelihood: -313021.296256
EM: Round [147] log likelihood: -313021.295998
EM: Round [148] log likelihood: -313021.295744
EM: Round [149] log likelihood: -313021.295496
EM: Round [150] log likelihood: -313021.295252
EM: Round [151] log likelihood: -313021.295013
EM: Round [152] log likelihood: -313021.294779
EM: Round [153] log likelihood: -313021.294549
EM: Round [154] log likelihood: -313021.294324
EM: Round [155] log likelihood: -313021.294103
EM: Round [156] log likelihood: -313021.293886
EM: Round [157] log likelihood: -313021.293673
EM: Round [158] log likelihood: -313021.293465
EM: Round [159] log likelihood: -313021.293260
EM: Round [160] log likelihood: -313021.293059
EM: Round [161] log likelihood: -313021.292862
EM: Round [162] log likelihood: -313021.292668
EM: Round [163] log likelihood: -313021.292478
EM: Round [164] log likelihood: -313021.292292
EM: Round [165] log likelihood: -313021.292109
EM: Round [166] log likelihood: -313021.291929
EM: Round [167] log likelihood: -313021.291753
EM: Round [168] log likelihood: -313021.291580
EM: Round [169] log likelihood: -313021.291410
EM: Round [170] log likelihood: -313021.291243
EM: Round [171] log likelihood: -313021.291080
EM: Round [172] log likelihood: -313021.290919
EM: Round [173] log likelihood: -313021.290761
EM: Round [174] log likelihood: -313021.290606
EM: Round [175] log likelihood: -313021.290454
EM: Round [176] log likelihood: -313021.290304
EM: Round [177] log likelihood: -313021.290158
EM: Round [178] log likelihood: -313021.290014
EM: Round [179] log likelihood: -313021.289872
EM: Round [180] log likelihood: -313021.289733
EM: Round [181] log likelihood: -313021.289596
EM: Round [182] log likelihood: -313021.289462
EM: Round [183] log likelihood: -313021.289331
EM: Round [184] log likelihood: -313021.289201
EM: Round [185] log likelihood: -313021.289074
EM: Round [186] log likelihood: -313021.288950
EM: Round [187] log likelihood: -313021.288827
EM: Round [188] log likelihood: -313021.288707
EM: Round [189] log likelihood: -313021.288589
EM: Round [190] log likelihood: -313021.288473
EM: Round [191] log likelihood: -313021.288359
EM: Round [192] log likelihood: -313021.288247
EM: Round [193] log likelihood: -313021.288137
EM: Round [194] log likelihood: -313021.288029
EM: Round [195] log likelihood: -313021.287923
EM: Round [196] log likelihood: -313021.287818
EM: Round [197] log likelihood: -313021.287716
EM: Round [198] log likelihood: -313021.287615
EM: Round [199] log likelihood: -313021.287517
EM: Stopping iterations at round 199 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -313446.779778
EM: Round [1] log likelihood: -313127.381884
EM: Round [2] log likelihood: -313013.742851
EM: Round [3] log likelihood: -312961.337506
EM: Round [4] log likelihood: -312934.234634
EM: Round [5] log likelihood: -312919.281569
EM: Round [6] log likelihood: -312910.599946
EM: Round [7] log likelihood: -312905.313729
EM: Round [8] log likelihood: -312901.945392
EM: Round [9] log likelihood: -312899.706526
EM: Round [10] log likelihood: -312898.160554
EM: Round [11] log likelihood: -312897.056445
EM: Round [12] log likelihood: -312896.244370
EM: Round [13] log likelihood: -312895.631637
EM: Round [14] log likelihood: -312895.158949
EM: Round [15] log likelihood: -312894.787186
EM: Round [16] log likelihood: -312894.489815
EM: Round [17] log likelihood: -312894.248386
EM: Round [18] log likelihood: -312894.049780
EM: Round [19] log likelihood: -312893.884482
EM: Round [20] log likelihood: -312893.745468
EM: Round [21] log likelihood: -312893.627466
EM: Round [22] log likelihood: -312893.526462
EM: Round [23] log likelihood: -312893.439358
EM: Round [24] log likelihood: -312893.363732
EM: Round [25] log likelihood: -312893.297670
EM: Round [26] log likelihood: -312893.239642
EM: Round [27] log likelihood: -312893.188415
EM: Round [28] log likelihood: -312893.142984
EM: Round [29] log likelihood: -312893.102523
EM: Round [30] log likelihood: -312893.066349
EM: Round [31] log likelihood: -312893.033894
EM: Round [32] log likelihood: -312893.004678
EM: Round [33] log likelihood: -312892.978299
EM: Round [34] log likelihood: -312892.954413
EM: Round [35] log likelihood: -312892.932727
EM: Round [36] log likelihood: -312892.912990
EM: Round [37] log likelihood: -312892.894985
EM: Round [38] log likelihood: -312892.878524
EM: Round [39] log likelihood: -312892.863442
EM: Round [40] log likelihood: -312892.849598
EM: Round [41] log likelihood: -312892.836865
EM: Round [42] log likelihood: -312892.825135
EM: Round [43] log likelihood: -312892.814308
EM: Round [44] log likelihood: -312892.804301
EM: Round [45] log likelihood: -312892.795035
EM: Round [46] log likelihood: -312892.786443
EM: Round [47] log likelihood: -312892.778465
EM: Round [48] log likelihood: -312892.771046
EM: Round [49] log likelihood: -312892.764137
EM: Round [50] log likelihood: -312892.757696
EM: Round [51] log likelihood: -312892.751682
EM: Round [52] log likelihood: -312892.746061
EM: Round [53] log likelihood: -312892.740800
EM: Round [54] log likelihood: -312892.735870
EM: Round [55] log likelihood: -312892.731246
EM: Round [56] log likelihood: -312892.726903
EM: Round [57] log likelihood: -312892.722820
EM: Round [58] log likelihood: -312892.718977
EM: Round [59] log likelihood: -312892.715356
EM: Round [60] log likelihood: -312892.711942
EM: Round [61] log likelihood: -312892.708717
EM: Round [62] log likelihood: -312892.705671
EM: Round [63] log likelihood: -312892.702788
EM: Round [64] log likelihood: -312892.700059
EM: Round [65] log likelihood: -312892.697473
EM: Round [66] log likelihood: -312892.695020
EM: Round [67] log likelihood: -312892.692690
EM: Round [68] log likelihood: -312892.690477
EM: Round [69] log likelihood: -312892.688371
EM: Round [70] log likelihood: -312892.686367
EM: Round [71] log likelihood: -312892.684458
EM: Round [72] log likelihood: -312892.682638
EM: Round [73] log likelihood: -312892.680901
EM: Round [74] log likelihood: -312892.679243
EM: Round [75] log likelihood: -312892.677657
EM: Round [76] log likelihood: -312892.676142
EM: Round [77] log likelihood: -312892.674691
EM: Round [78] log likelihood: -312892.673301
EM: Round [79] log likelihood: -312892.671970
EM: Round [80] log likelihood: -312892.670692
EM: Round [81] log likelihood: -312892.669467
EM: Round [82] log likelihood: -312892.668290
EM: Round [83] log likelihood: -312892.667158
EM: Round [84] log likelihood: -312892.666071
EM: Round [85] log likelihood: -312892.665024
EM: Round [86] log likelihood: -312892.664017
EM: Round [87] log likelihood: -312892.663047
EM: Round [88] log likelihood: -312892.662112
EM: Round [89] log likelihood: -312892.661210
EM: Round [90] log likelihood: -312892.660340
EM: Round [91] log likelihood: -312892.659500
EM: Round [92] log likelihood: -312892.658688
EM: Round [93] log likelihood: -312892.657904
EM: Round [94] log likelihood: -312892.657146
EM: Round [95] log likelihood: -312892.656413
EM: Round [96] log likelihood: -312892.655704
EM: Round [97] log likelihood: -312892.655017
EM: Round [98] log likelihood: -312892.654351
EM: Round [99] log likelihood: -312892.653706
EM: Round [100] log likelihood: -312892.653081
EM: Round [101] log likelihood: -312892.652475
EM: Round [102] log likelihood: -312892.651887
EM: Round [103] log likelihood: -312892.651316
EM: Round [104] log likelihood: -312892.650762
EM: Round [105] log likelihood: -312892.650223
EM: Round [106] log likelihood: -312892.649700
EM: Round [107] log likelihood: -312892.649192
EM: Round [108] log likelihood: -312892.648697
EM: Round [109] log likelihood: -312892.648216
EM: Round [110] log likelihood: -312892.647748
EM: Round [111] log likelihood: -312892.647293
EM: Round [112] log likelihood: -312892.646849
EM: Round [113] log likelihood: -312892.646417
EM: Round [114] log likelihood: -312892.645996
EM: Round [115] log likelihood: -312892.645587
EM: Round [116] log likelihood: -312892.645187
EM: Round [117] log likelihood: -312892.644797
EM: Round [118] log likelihood: -312892.644417
EM: Round [119] log likelihood: -312892.644047
EM: Round [120] log likelihood: -312892.643685
EM: Round [121] log likelihood: -312892.643332
EM: Round [122] log likelihood: -312892.642988
EM: Round [123] log likelihood: -312892.642651
EM: Round [124] log likelihood: -312892.642323
EM: Round [125] log likelihood: -312892.642002
EM: Round [126] log likelihood: -312892.641689
EM: Round [127] log likelihood: -312892.641383
EM: Round [128] log likelihood: -312892.641083
EM: Round [129] log likelihood: -312892.640791
EM: Round [130] log likelihood: -312892.640505
EM: Round [131] log likelihood: -312892.640225
EM: Round [132] log likelihood: -312892.639951
EM: Round [133] log likelihood: -312892.639684
EM: Round [134] log likelihood: -312892.639422
EM: Round [135] log likelihood: -312892.639166
EM: Round [136] log likelihood: -312892.638915
EM: Round [137] log likelihood: -312892.638670
EM: Round [138] log likelihood: -312892.638429
EM: Round [139] log likelihood: -312892.638194
EM: Round [140] log likelihood: -312892.637964
EM: Round [141] log likelihood: -312892.637739
EM: Round [142] log likelihood: -312892.637518
EM: Round [143] log likelihood: -312892.637302
EM: Round [144] log likelihood: -312892.637090
EM: Round [145] log likelihood: -312892.636882
EM: Round [146] log likelihood: -312892.636679
EM: Round [147] log likelihood: -312892.636480
EM: Round [148] log likelihood: -312892.636284
EM: Round [149] log likelihood: -312892.636093
EM: Round [150] log likelihood: -312892.635905
EM: Round [151] log likelihood: -312892.635722
EM: Round [152] log likelihood: -312892.635541
EM: Round [153] log likelihood: -312892.635365
EM: Round [154] log likelihood: -312892.635191
EM: Round [155] log likelihood: -312892.635022
EM: Round [156] log likelihood: -312892.634855
EM: Round [157] log likelihood: -312892.634692
EM: Round [158] log likelihood: -312892.634532
EM: Round [159] log likelihood: -312892.634375
EM: Round [160] log likelihood: -312892.634220
EM: Round [161] log likelihood: -312892.634069
EM: Round [162] log likelihood: -312892.633921
EM: Round [163] log likelihood: -312892.633776
EM: Round [164] log likelihood: -312892.633633
EM: Round [165] log likelihood: -312892.633493
EM: Round [166] log likelihood: -312892.633356
EM: Round [167] log likelihood: -312892.633221
EM: Round [168] log likelihood: -312892.633089
EM: Round [169] log likelihood: -312892.632959
EM: Round [170] log likelihood: -312892.632832
EM: Round [171] log likelihood: -312892.632707
EM: Round [172] log likelihood: -312892.632584
EM: Round [173] log likelihood: -312892.632464
EM: Round [174] log likelihood: -312892.632346
EM: Round [175] log likelihood: -312892.632230
EM: Round [176] log likelihood: -312892.632117
EM: Round [177] log likelihood: -312892.632005
EM: Round [178] log likelihood: -312892.631896
EM: Round [179] log likelihood: -312892.631788
EM: Round [180] log likelihood: -312892.631683
EM: Round [181] log likelihood: -312892.631579
EM: Round [182] log likelihood: -312892.631477
EM: Round [183] log likelihood: -312892.631378
EM: Stopping iterations at round 183 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.hcQnTjIbJB/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20 --fusion_preds /tmp/nxf.hcQnTjIbJB/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.hcQnTjIbJB/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.hcQnTjIbJB/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.hcQnTjIbJB/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.hcQnTjIbJB/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter --genome_lib_dir /tmp/nxf.hcQnTjIbJB/ctat_genome_lib_build_dir --max_promiscuity 10 --min_pct_dom_promiscuity 20
CMD: cp /tmp/nxf.hcQnTjIbJB/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.hcQnTjIbJB/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.hcQnTjIbJB/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.hcQnTjIbJB/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.hcQnTjIbJB/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.hcQnTjIbJB/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.hcQnTjIbJB/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 293914112 > /tmp/nxf.hcQnTjIbJB/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.hcQnTjIbJB/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.hcQnTjIbJB/ctat_genome_lib_build_dir > /tmp/nxf.hcQnTjIbJB/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.hcQnTjIbJB/ctat_genome_lib_build_dir --annotate /tmp/nxf.hcQnTjIbJB/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.hcQnTjIbJB/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.hcQnTjIbJB/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.hcQnTjIbJB/ctat_genome_lib_build_dir
-done, see /tmp/nxf.hcQnTjIbJB/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.hcQnTjIbJB/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.hcQnTjIbJB/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 1444, filtered: 11038)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.hcQnTjIbJB/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.hcQnTjIbJB/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.hcQnTjIbJB/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [ENSG00000229739.4]
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WARNING, no entry stored in dbm for [IGH.g@-ext]
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WARNING, no entry stored in dbm for [ENSG00000128438.10]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000227220.1]
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WARNING, no entry stored in dbm for [ENSG00000236156.2]
WARNING, no entry stored in dbm for [ENSG00000226777.7]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000271795.1]
WARNING, no entry stored in dbm for [ENSG00000186704.9]
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WARNING, no entry stored in dbm for [ENSG00000236156.2]
WARNING, no entry stored in dbm for [ENSG00000229930.1]
WARNING, no entry stored in dbm for [ENSG00000283345.1]
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WARNING, no entry stored in dbm for [ENSG00000261526.2]
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WARNING, no entry stored in dbm for [ENSG00000226363.3]
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WARNING, no entry stored in dbm for [ENSG00000237356.7]
WARNING, no entry stored in dbm for [ENSG00000272397.1]
WARNING, no entry stored in dbm for [ENSG00000234761.1]
WARNING, no entry stored in dbm for [ENSG00000237512.6]
WARNING, no entry stored in dbm for [ENSG00000250980.1]
WARNING, no entry stored in dbm for [ENSG00000235141.1]
WARNING, no entry stored in dbm for [ENSG00000242294.6]
WARNING, no entry stored in dbm for [ENSG00000225914.3]
WARNING, no entry stored in dbm for [ENSG00000179571.10]
WARNING, no entry stored in dbm for [ENSG00000182796.14]
WARNING, no entry stored in dbm for [ENSG00000280046.1]
WARNING, no entry stored in dbm for [ENSG00000224043.8]
WARNING, no entry stored in dbm for [ENSG00000253161.5]
WARNING, no entry stored in dbm for [ENSG00000232314.1]
WARNING, no entry stored in dbm for [ENSG00000236583.1]
WARNING, no entry stored in dbm for [ENSG00000216906.2]
WARNING, no entry stored in dbm for [ENSG00000240549.2]
WARNING, no entry stored in dbm for [ENSG00000238172.2]
WARNING, no entry stored in dbm for [ENSG00000236384.7]
WARNING, no entry stored in dbm for [ENSG00000227157.2]
WARNING, no entry stored in dbm for [ENSG00000234911.2]
WARNING, no entry stored in dbm for [ENSG00000247828.8]
WARNING, no entry stored in dbm for [ENSG00000188185.13]
WARNING, no entry stored in dbm for [ENSG00000215158.9]
WARNING, no entry stored in dbm for [ENSG00000235203.2]
WARNING, no entry stored in dbm for [ENSG00000128438.10]
WARNING, no entry stored in dbm for [ENSG00000282390.1]
WARNING, no entry stored in dbm for [ENSG00000259977.1]
WARNING, no entry stored in dbm for [ENSG00000247708.8]
WARNING, no entry stored in dbm for [ENSG00000068781.21]
WARNING, no entry stored in dbm for [ENSG00000267491.1]
WARNING, no entry stored in dbm for [ENSG00000285517.1]
WARNING, no entry stored in dbm for [ENSG00000106610.15]
WARNING, no entry stored in dbm for [ENSG00000279353.1]
WARNING, no entry stored in dbm for [ENSG00000285280.2]
WARNING, no entry stored in dbm for [ENSG00000266179.2]
WARNING, no entry stored in dbm for [ENSG00000284740.1]
WARNING, no entry stored in dbm for [ENSG00000204650.14]
WARNING, no entry stored in dbm for [ENSG00000271699.5]
WARNING, no entry stored in dbm for [ENSG00000251676.2]
WARNING, no entry stored in dbm for [ENSG00000234912.12]
WARNING, no entry stored in dbm for [ENSG00000163597.15]
WARNING, no entry stored in dbm for [ENSG00000224078.15]
WARNING, no entry stored in dbm for [ENSG00000224078.15]
WARNING, no entry stored in dbm for [ENSG00000152117.17]
WARNING, no entry stored in dbm for [ENSG00000259488.2]
WARNING, no entry stored in dbm for [ENSG00000258912.2]
WARNING, no entry stored in dbm for [ENSG00000237037.9]
WARNING, no entry stored in dbm for [ENSG00000237037.9]
WARNING, no entry stored in dbm for [ENSG00000228983.9]
WARNING, no entry stored in dbm for [ENSG00000254777.5]
WARNING, no entry stored in dbm for [ENSG00000229288.1]
WARNING, no entry stored in dbm for [ENSG00000231234.2]
WARNING, no entry stored in dbm for [ENSG00000230189.7]
WARNING, no entry stored in dbm for [ENSG00000257771.6]
WARNING, no entry stored in dbm for [ENSG00000278643.1]
WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000287411.1]
WARNING, no entry stored in dbm for [ENSG00000226620.8]
WARNING, no entry stored in dbm for [ENSG00000205488.9]
WARNING, no entry stored in dbm for [ENSG00000251532.1]
WARNING, no entry stored in dbm for [ENSG00000258692.2]
WARNING, no entry stored in dbm for [ENSG00000251441.3]
WARNING, no entry stored in dbm for [ENSG00000225678.2]
WARNING, no entry stored in dbm for [ENSG00000230629.2]
WARNING, no entry stored in dbm for [ENSG00000243366.3]
WARNING, no entry stored in dbm for [ENSG00000279440.1]
WARNING, no entry stored in dbm for [ENSG00000240494.2]
WARNING, no entry stored in dbm for [ENSG00000227615.1]
WARNING, no entry stored in dbm for [ENSG00000214374.2]
WARNING, no entry stored in dbm for [ENSG00000240652.1]
WARNING, no entry stored in dbm for [ENSG00000238069.1]
WARNING, no entry stored in dbm for [ENSG00000244705.1]
WARNING, no entry stored in dbm for [ENSG00000224291.1]
WARNING, no entry stored in dbm for [ENSG00000250562.1]
WARNING, no entry stored in dbm for [ENSG00000229235.1]
WARNING, no entry stored in dbm for [ENSG00000234498.3]
WARNING, no entry stored in dbm for [ENSG00000258506.2]
WARNING, no entry stored in dbm for [ENSG00000172746.6]
WARNING, no entry stored in dbm for [ENSG00000269609.6]
WARNING, no entry stored in dbm for [ENSG00000264978.2]
WARNING, no entry stored in dbm for [ENSG00000244425.3]
WARNING, no entry stored in dbm for [ENSG00000275090.1]
WARNING, no entry stored in dbm for [ENSG00000241175.3]
WARNING, no entry stored in dbm for [ENSG00000240767.3]
WARNING, no entry stored in dbm for [ENSG00000244399.3]
WARNING, no entry stored in dbm for [ENSG00000244230.3]
WARNING, no entry stored in dbm for [ENSG00000200966.1]
WARNING, no entry stored in dbm for [ENSG00000222376.1]
WARNING, no entry stored in dbm for [ENSG00000222987.1]
WARNING, no entry stored in dbm for [ENSG00000222174.1]
WARNING, no entry stored in dbm for [ENSG00000200379.1]
WARNING, no entry stored in dbm for [ENSG00000222376.1]
WARNING, no entry stored in dbm for [ENSG00000199218.1]
WARNING, no entry stored in dbm for [ENSG00000222376.1]
WARNING, no entry stored in dbm for [ENSG00000269900.3]
WARNING, no entry stored in dbm for [ENSG00000258903.2]
WARNING, no entry stored in dbm for [ENSG00000261126.7]
WARNING, no entry stored in dbm for [ENSG00000204091.8]
WARNING, no entry stored in dbm for [ENSG00000170919.16]
WARNING, no entry stored in dbm for [ENSG00000225077.3]
WARNING, no entry stored in dbm for [ENSG00000223704.2]
WARNING, no entry stored in dbm for [ENSG00000213706.2]
WARNING, no entry stored in dbm for [ENSG00000269386.5]
WARNING, no entry stored in dbm for [ENSG00000250337.7]
WARNING, no entry stored in dbm for [ENSG00000218426.5]
WARNING, no entry stored in dbm for [ENSG00000286170.1]
WARNING, no entry stored in dbm for [ENSG00000231503.4]
WARNING, no entry stored in dbm for [ENSG00000231503.4]
WARNING, no entry stored in dbm for [ENSG00000249050.1]
WARNING, no entry stored in dbm for [ENSG00000254658.3]
WARNING, no entry stored in dbm for [ENSG00000253897.2]
WARNING, no entry stored in dbm for [ENSG00000257167.2]
WARNING, no entry stored in dbm for [ENSG00000180259.10]
WARNING, no entry stored in dbm for [ENSG00000230461.9]
WARNING, no entry stored in dbm for [ENSG00000259663.2]
WARNING, no entry stored in dbm for [ENSG00000273125.2]
WARNING, no entry stored in dbm for [ENSG00000248473.2]
WARNING, no entry stored in dbm for [ENSG00000232386.9]
WARNING, no entry stored in dbm for [ENSG00000272655.2]
WARNING, no entry stored in dbm for [ENSG00000285751.1]
WARNING, no entry stored in dbm for [ENSG00000187953.10]
WARNING, no entry stored in dbm for [ENSG00000239556.4]
WARNING, no entry stored in dbm for [ENSG00000251436.2]
WARNING, no entry stored in dbm for [ENSG00000271437.1]
WARNING, no entry stored in dbm for [ENSG00000244257.5]
WARNING, no entry stored in dbm for [ENSG00000277458.1]
WARNING, no entry stored in dbm for [ENSG00000229359.2]
WARNING, no entry stored in dbm for [ENSG00000266962.2]
WARNING, no entry stored in dbm for [ENSG00000226608.3]
WARNING, no entry stored in dbm for [ENSG00000245750.10]
WARNING, no entry stored in dbm for [ENSG00000286027.1]
WARNING, no entry stored in dbm for [ENSG00000250485.1]
WARNING, no entry stored in dbm for [ENSG00000251182.2]
WARNING, no entry stored in dbm for [ENSG00000287700.1]
WARNING, no entry stored in dbm for [ENSG00000233892.1]
WARNING, no entry stored in dbm for [ENSG00000255875.2]
WARNING, no entry stored in dbm for [ENSG00000205331.5]
WARNING, no entry stored in dbm for [ENSG00000229127.2]
WARNING, no entry stored in dbm for [ENSG00000266179.2]
WARNING, no entry stored in dbm for [ENSG00000286340.1]
WARNING, no entry stored in dbm for [ENSG00000106133.18]
WARNING, no entry stored in dbm for [ENSG00000260757.1]
WARNING, no entry stored in dbm for [ENSG00000236991.6]
WARNING, no entry stored in dbm for [ENSG00000206623.1]
WARNING, no entry stored in dbm for [ENSG00000254777.5]
WARNING, no entry stored in dbm for [ENSG00000228623.6]
WARNING, no entry stored in dbm for [ENSG00000206337.12]
WARNING, no entry stored in dbm for [ENSG00000124224.17]
WARNING, no entry stored in dbm for [ENSG00000256742.1]
WARNING, no entry stored in dbm for [ENSG00000185689.17]
WARNING, no entry stored in dbm for [ENSG00000205360.6]
WARNING, no entry stored in dbm for [ENSG00000215866.8]
WARNING, no entry stored in dbm for [ENSG00000214955.5]
WARNING, no entry stored in dbm for [ENSG00000197847.12]
WARNING, no entry stored in dbm for [ENSG00000234072.1]
WARNING, no entry stored in dbm for [ENSG00000272106.1]
WARNING, no entry stored in dbm for [ENSG00000234801.3]
WARNING, no entry stored in dbm for [ENSG00000231329.8]
WARNING, no entry stored in dbm for [ENSG00000172965.17]
WARNING, no entry stored in dbm for [ENSG00000233673.7]
WARNING, no entry stored in dbm for [ENSG00000172965.17]
WARNING, no entry stored in dbm for [ENSG00000204745.4]
WARNING, no entry stored in dbm for [ENSG00000233006.8]
WARNING, no entry stored in dbm for [ENSG00000267519.6]
WARNING, no entry stored in dbm for [ENSG00000287069.1]
WARNING, no entry stored in dbm for [ENSG00000267519.6]
WARNING, no entry stored in dbm for [ENSG00000223403.6]
WARNING, no entry stored in dbm for [ENSG00000178722.13]
WARNING, no entry stored in dbm for [ENSG00000279748.1]
WARNING, no entry stored in dbm for [ENSG00000244227.7]
WARNING, no entry stored in dbm for [ENSG00000214144.3]
WARNING, no entry stored in dbm for [ENSG00000257139.1]
WARNING, no entry stored in dbm for [ENSG00000251129.2]
WARNING, no entry stored in dbm for [ENSG00000256576.2]
WARNING, no entry stored in dbm for [ENSG00000258819.2]
WARNING, no entry stored in dbm for [ENSG00000241213.2]
WARNING, no entry stored in dbm for [ENSG00000254741.1]
WARNING, no entry stored in dbm for [ENSG00000231437.3]
WARNING, no entry stored in dbm for [ENSG00000234928.1]
WARNING, no entry stored in dbm for [ENSG00000227755.1]
WARNING, no entry stored in dbm for [ENSG00000237339.5]
WARNING, no entry stored in dbm for [ENSG00000223704.2]
WARNING, no entry stored in dbm for [ENSG00000237491.10]
WARNING, no entry stored in dbm for [ENSG00000236922.10]
WARNING, no entry stored in dbm for [ENSG00000223823.1]
WARNING, no entry stored in dbm for [ENSG00000223823.1]
WARNING, no entry stored in dbm for [ENSG00000228262.10]
WARNING, no entry stored in dbm for [ENSG00000281404.2]
WARNING, no entry stored in dbm for [ENSG00000281912.1]
WARNING, no entry stored in dbm for [ENSG00000268754.4]
WARNING, no entry stored in dbm for [ENSG00000250334.6]
WARNING, no entry stored in dbm for [ENSG00000277147.6]
WARNING, no entry stored in dbm for [ENSG00000231419.6]
WARNING, no entry stored in dbm for [ENSG00000226067.7]
WARNING, no entry stored in dbm for [ENSG00000236854.2]
WARNING, no entry stored in dbm for [ENSG00000259974.3]
WARNING, no entry stored in dbm for [ENSG00000224843.8]
WARNING, no entry stored in dbm for [ENSG00000180385.8]
WARNING, no entry stored in dbm for [ENSG00000260034.1]
WARNING, no entry stored in dbm for [ENSG00000282692.1]
WARNING, no entry stored in dbm for [ENSG00000206341.7]
WARNING, no entry stored in dbm for [ENSG00000279805.1]
WARNING, no entry stored in dbm for [ENSG00000288524.1]
WARNING, no entry stored in dbm for [ENSG00000237978.6]
WARNING, no entry stored in dbm for [ENSG00000277946.1]
WARNING, no entry stored in dbm for [ENSG00000236790.6]
WARNING, no entry stored in dbm for [ENSG00000277654.6]
WARNING, no entry stored in dbm for [ENSG00000254034.2]
WARNING, no entry stored in dbm for [ENSG00000261786.1]
WARNING, no entry stored in dbm for [ENSG00000238231.2]
WARNING, no entry stored in dbm for [ENSG00000227733.10]
WARNING, no entry stored in dbm for [ENSG00000285219.2]
WARNING, no entry stored in dbm for [ENSG00000223652.2]
WARNING, no entry stored in dbm for [ENSG00000239533.6]
WARNING, no entry stored in dbm for [ENSG00000272905.1]
WARNING, no entry stored in dbm for [ENSG00000237604.1]
WARNING, no entry stored in dbm for [ENSG00000225755.2]
WARNING, no entry stored in dbm for [ENSG00000251665.1]
WARNING, no entry stored in dbm for [ENSG00000237125.11]
WARNING, no entry stored in dbm for [ENSG00000161912.18]
WARNING, no entry stored in dbm for [ENSG00000251451.1]
WARNING, no entry stored in dbm for [ENSG00000230189.7]
WARNING, no entry stored in dbm for [ENSG00000241621.1]
WARNING, no entry stored in dbm for [ENSG00000172297.7]
WARNING, no entry stored in dbm for [ENSG00000229608.1]
WARNING, no entry stored in dbm for [ENSG00000251209.9]
WARNING, no entry stored in dbm for [ENSG00000232520.2]
WARNING, no entry stored in dbm for [ENSG00000240183.3]
WARNING, no entry stored in dbm for [ENSG00000227183.3]
WARNING, no entry stored in dbm for [ENSG00000248834.2]
WARNING, no entry stored in dbm for [ENSG00000276291.5]
WARNING, no entry stored in dbm for [ENSG00000239480.1]
WARNING, no entry stored in dbm for [ENSG00000244097.1]
WARNING, no entry stored in dbm for [ENSG00000215302.8]
WARNING, no entry stored in dbm for [ENSG00000229321.2]
WARNING, no entry stored in dbm for [ENSG00000234807.7]
WARNING, no entry stored in dbm for [ENSG00000167798.17]
WARNING, no entry stored in dbm for [ENSG00000241860.7]
WARNING, no entry stored in dbm for [ENSG00000242209.1]
WARNING, no entry stored in dbm for [ENSG00000213641.4]
WARNING, no entry stored in dbm for [ENSG00000271913.7]
WARNING, no entry stored in dbm for [ENSG00000260565.7]
WARNING, no entry stored in dbm for [ENSG00000214900.11]
WARNING, no entry stored in dbm for [ENSG00000287706.1]
WARNING, no entry stored in dbm for [ENSG00000255262.3]
WARNING, no entry stored in dbm for [ENSG00000184991.3]
WARNING, no entry stored in dbm for [ENSG00000215093.3]
WARNING, no entry stored in dbm for [ENSG00000259612.1]
WARNING, no entry stored in dbm for [ENSG00000258730.1]
WARNING, no entry stored in dbm for [ENSG00000286042.1]
WARNING, no entry stored in dbm for [ENSG00000260261.2]
WARNING, no entry stored in dbm for [ENSG00000259511.3]
WARNING, no entry stored in dbm for [ENSG00000254275.6]
WARNING, no entry stored in dbm for [ENSG00000236021.2]
WARNING, no entry stored in dbm for [ENSG00000225778.5]
WARNING, no entry stored in dbm for [ENSG00000248550.4]
WARNING, no entry stored in dbm for [ENSG00000229760.1]
WARNING, no entry stored in dbm for [ENSG00000286442.1]
WARNING, no entry stored in dbm for [ENSG00000228314.1]
WARNING, no entry stored in dbm for [ENSG00000235325.1]
WARNING, no entry stored in dbm for [ENSG00000189136.9]
WARNING, no entry stored in dbm for [ENSG00000233937.7]
WARNING, no entry stored in dbm for [ENSG00000187172.15]
WARNING, no entry stored in dbm for [ENSG00000276710.4]
WARNING, no entry stored in dbm for [ENSG00000080947.15]
WARNING, no entry stored in dbm for [ENSG00000080947.15]
WARNING, no entry stored in dbm for [ENSG00000233973.7]
WARNING, no entry stored in dbm for [ENSG00000270533.2]
WARNING, no entry stored in dbm for [ENSG00000168405.17]
WARNING, no entry stored in dbm for [ENSG00000227638.2]
WARNING, no entry stored in dbm for [ENSG00000230300.1]
WARNING, no entry stored in dbm for [ENSG00000154608.14]
WARNING, no entry stored in dbm for [ENSG00000227036.8]
WARNING, no entry stored in dbm for [ENSG00000228219.1]
WARNING, no entry stored in dbm for [ENSG00000285803.1]
WARNING, no entry stored in dbm for [ENSG00000223745.8]
WARNING, no entry stored in dbm for [ENSG00000236830.7]
WARNING, no entry stored in dbm for [ENSG00000240809.1]
WARNING, no entry stored in dbm for [ENSG00000257167.2]
WARNING, no entry stored in dbm for [ENSG00000224635.2]
WARNING, no entry stored in dbm for [ENSG00000285417.1]
WARNING, no entry stored in dbm for [ENSG00000285417.1]
WARNING, no entry stored in dbm for [ENSG00000259728.5]
WARNING, no entry stored in dbm for [ENSG00000262049.1]
WARNING, no entry stored in dbm for [ENSG00000270025.2]
WARNING, no entry stored in dbm for [ENSG00000243289.1]
WARNING, no entry stored in dbm for [ENSG00000179362.14]
WARNING, no entry stored in dbm for [ENSG00000227262.3]
WARNING, no entry stored in dbm for [ENSG00000267083.1]
WARNING, no entry stored in dbm for [ENSG00000229498.1]
WARNING, no entry stored in dbm for [ENSG00000257252.6]
WARNING, no entry stored in dbm for [ENSG00000233947.1]
WARNING, no entry stored in dbm for [ENSG00000213963.6]
WARNING, no entry stored in dbm for [ENSG00000253937.1]
WARNING, no entry stored in dbm for [ENSG00000214855.9]
WARNING, no entry stored in dbm for [ENSG00000268812.3]
WARNING, no entry stored in dbm for [ENSG00000256591.5]
WARNING, no entry stored in dbm for [ENSG00000255136.3]
WARNING, no entry stored in dbm for [ENSG00000261239.6]
WARNING, no entry stored in dbm for [ENSG00000277112.3]
WARNING, no entry stored in dbm for [ENSG00000223891.6]
WARNING, no entry stored in dbm for [ENSG00000287560.1]
WARNING, no entry stored in dbm for [ENSG00000233268.3]
WARNING, no entry stored in dbm for [ENSG00000285799.1]
WARNING, no entry stored in dbm for [ENSG00000254741.1]
WARNING, no entry stored in dbm for [ENSG00000270780.1]
WARNING, no entry stored in dbm for [ENSG00000234589.4]
WARNING, no entry stored in dbm for [ENSG00000224515.1]
WARNING, no entry stored in dbm for [ENSG00000227619.3]
WARNING, no entry stored in dbm for [ENSG00000232347.1]
WARNING, no entry stored in dbm for [ENSG00000285424.1]
WARNING, no entry stored in dbm for [ENSG00000288583.1]
WARNING, no entry stored in dbm for [ENSG00000287368.1]
WARNING, no entry stored in dbm for [ENSG00000219928.2]
WARNING, no entry stored in dbm for [ENSG00000234426.3]
WARNING, no entry stored in dbm for [ENSG00000259118.5]
WARNING, no entry stored in dbm for [ENSG00000284224.1]
WARNING, no entry stored in dbm for [ENSG00000283773.1]
WARNING, no entry stored in dbm for [ENSG00000287449.1]
WARNING, no entry stored in dbm for [ENSG00000237686.7]
WARNING, no entry stored in dbm for [ENSG00000286546.1]
WARNING, no entry stored in dbm for [ENSG00000227486.2]
WARNING, no entry stored in dbm for [ENSG00000279833.1]
WARNING, no entry stored in dbm for [ENSG00000286491.1]
WARNING, no entry stored in dbm for [ENSG00000232218.1]
WARNING, no entry stored in dbm for [ENSG00000233708.1]
WARNING, no entry stored in dbm for [ENSG00000229425.3]
WARNING, no entry stored in dbm for [ENSG00000230869.1]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000223959.8]
WARNING, no entry stored in dbm for [ENSG00000275103.1]
WARNING, no entry stored in dbm for [ENSG00000231713.2]
WARNING, no entry stored in dbm for [ENSG00000259205.2]
WARNING, no entry stored in dbm for [ENSG00000241684.6]
WARNING, no entry stored in dbm for [ENSG00000215837.7]
WARNING, no entry stored in dbm for [ENSG00000241473.1]
WARNING, no entry stored in dbm for [ENSG00000277561.5]
WARNING, no entry stored in dbm for [ENSG00000259976.3]
WARNING, no entry stored in dbm for [ENSG00000280029.4]
WARNING, no entry stored in dbm for [ENSG00000225914.3]
WARNING, no entry stored in dbm for [ENSG00000280029.4]
WARNING, no entry stored in dbm for [ENSG00000280225.1]
WARNING, no entry stored in dbm for [ENSG00000267532.5]
WARNING, no entry stored in dbm for [ENSG00000176183.8]
WARNING, no entry stored in dbm for [ENSG00000261499.2]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000260628.5]
WARNING, no entry stored in dbm for [ENSG00000246596.7]
WARNING, no entry stored in dbm for [ENSG00000261819.1]
WARNING, no entry stored in dbm for [ENSG00000254609.1]
WARNING, no entry stored in dbm for [ENSG00000278133.1]
WARNING, no entry stored in dbm for [ENSG00000215068.8]
WARNING, no entry stored in dbm for [ENSG00000283345.1]
WARNING, no entry stored in dbm for [ENSG00000215302.8]
WARNING, no entry stored in dbm for [ENSG00000260498.6]
WARNING, no entry stored in dbm for [ENSG00000249621.1]
WARNING, no entry stored in dbm for [ENSG00000251216.2]
WARNING, no entry stored in dbm for [ENSG00000230698.1]
WARNING, no entry stored in dbm for [ENSG00000259709.1]
WARNING, no entry stored in dbm for [ENSG00000275454.1]
WARNING, no entry stored in dbm for [ENSG00000224479.6]
WARNING, no entry stored in dbm for [ENSG00000251314.2]
WARNING, no entry stored in dbm for [ENSG00000241462.1]
WARNING, no entry stored in dbm for [ENSG00000227615.1]
WARNING, no entry stored in dbm for [ENSG00000277096.1]
WARNING, no entry stored in dbm for [ENSG00000242474.3]
WARNING, no entry stored in dbm for [ENSG00000242474.3]
WARNING, no entry stored in dbm for [ENSG00000242622.2]
WARNING, no entry stored in dbm for [ENSG00000288620.1]
WARNING, no entry stored in dbm for [ENSG00000288620.1]
WARNING, no entry stored in dbm for [ENSG00000187953.10]
WARNING, no entry stored in dbm for [ENSG00000239969.5]
WARNING, no entry stored in dbm for [ENSG00000280828.1]
WARNING, no entry stored in dbm for [ENSG00000246250.3]
WARNING, no entry stored in dbm for [ENSG00000259905.7]
WARNING, no entry stored in dbm for [ENSG00000246250.3]
WARNING, no entry stored in dbm for [ENSG00000259905.7]
WARNING, no entry stored in dbm for [ENSG00000257415.1]
WARNING, no entry stored in dbm for [ENSG00000204745.4]
WARNING, no entry stored in dbm for [ENSG00000204745.4]
WARNING, no entry stored in dbm for [ENSG00000237666.2]
WARNING, no entry stored in dbm for [ENSG00000248802.1]
WARNING, no entry stored in dbm for [ENSG00000260083.2]
WARNING, no entry stored in dbm for [ENSG00000217455.8]
WARNING, no entry stored in dbm for [ENSG00000279070.2]
WARNING, no entry stored in dbm for [ENSG00000231359.3]
WARNING, no entry stored in dbm for [ENSG00000213657.3]
WARNING, no entry stored in dbm for [ENSG00000197099.8]
WARNING, no entry stored in dbm for [ENSG00000283674.3]
WARNING, no entry stored in dbm for [ENSG00000283674.3]
WARNING, no entry stored in dbm for [ENSG00000286275.1]
WARNING, no entry stored in dbm for [ENSG00000260844.2]
WARNING, no entry stored in dbm for [ENSG00000240752.1]
WARNING, no entry stored in dbm for [ENSG00000227615.1]
WARNING, no entry stored in dbm for [ENSG00000255858.3]
WARNING, no entry stored in dbm for [ENSG00000256973.1]
WARNING, no entry stored in dbm for [ENSG00000243352.3]
WARNING, no entry stored in dbm for [ENSG00000256973.1]
WARNING, no entry stored in dbm for [ENSG00000243562.3]
WARNING, no entry stored in dbm for [ENSG00000256973.1]
WARNING, no entry stored in dbm for [ENSG00000239748.3]
WARNING, no entry stored in dbm for [ENSG00000256973.1]
WARNING, no entry stored in dbm for [ENSG00000239211.3]
WARNING, no entry stored in dbm for [ENSG00000256973.1]
WARNING, no entry stored in dbm for [ENSG00000243049.3]
WARNING, no entry stored in dbm for [ENSG00000256973.1]
WARNING, no entry stored in dbm for [ENSG00000264582.2]
WARNING, no entry stored in dbm for [ENSG00000256973.1]
WARNING, no entry stored in dbm for [ENSG00000240183.3]
WARNING, no entry stored in dbm for [ENSG00000250166.3]
WARNING, no entry stored in dbm for [ENSG00000254519.5]
WARNING, no entry stored in dbm for [ENSG00000287086.1]
WARNING, no entry stored in dbm for [ENSG00000184188.6]
WARNING, no entry stored in dbm for [ENSG00000286525.1]
WARNING, no entry stored in dbm for [ENSG00000256802.2]
WARNING, no entry stored in dbm for [ENSG00000268093.1]
WARNING, no entry stored in dbm for [ENSG00000267275.1]
WARNING, no entry stored in dbm for [ENSG00000231409.3]
WARNING, no entry stored in dbm for [ENSG00000226107.1]
WARNING, no entry stored in dbm for [ENSG00000267605.7]
WARNING, no entry stored in dbm for [ENSG00000267605.7]
WARNING, no entry stored in dbm for [ENSG00000267078.1]
WARNING, no entry stored in dbm for [ENSG00000251199.6]
WARNING, no entry stored in dbm for [ENSG00000259345.7]
WARNING, no entry stored in dbm for [ENSG00000271018.1]
WARNING, no entry stored in dbm for [ENSG00000224237.1]
WARNING, no entry stored in dbm for [ENSG00000261526.2]
WARNING, no entry stored in dbm for [ENSG00000257453.1]
WARNING, no entry stored in dbm for [ENSG00000254363.6]
WARNING, no entry stored in dbm for [ENSG00000249839.1]
WARNING, no entry stored in dbm for [ENSG00000286068.1]
WARNING, no entry stored in dbm for [ENSG00000259408.2]
WARNING, no entry stored in dbm for [ENSG00000231332.2]
WARNING, no entry stored in dbm for [ENSG00000259408.2]
WARNING, no entry stored in dbm for [ENSG00000226125.2]
WARNING, no entry stored in dbm for [ENSG00000277977.1]
WARNING, no entry stored in dbm for [ENSG00000282890.1]
WARNING, no entry stored in dbm for [ENSG00000111788.10]
WARNING, no entry stored in dbm for [ENSG00000280417.1]
WARNING, no entry stored in dbm for [ENSG00000257403.2]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000285754.1]
WARNING, no entry stored in dbm for [ENSG00000280007.1]
WARNING, no entry stored in dbm for [ENSG00000262292.2]
WARNING, no entry stored in dbm for [ENSG00000198491.3]
WARNING, no entry stored in dbm for [ENSG00000287123.1]
WARNING, no entry stored in dbm for [ENSG00000235725.1]
WARNING, no entry stored in dbm for [ENSG00000267405.1]
WARNING, no entry stored in dbm for [ENSG00000224280.1]
WARNING, no entry stored in dbm for [ENSG00000241057.2]
WARNING, no entry stored in dbm for [ENSG00000239556.4]
WARNING, no entry stored in dbm for [ENSG00000254610.3]
WARNING, no entry stored in dbm for [ENSG00000249188.1]
WARNING, no entry stored in dbm for [ENSG00000241764.4]
WARNING, no entry stored in dbm for [ENSG00000280347.1]
WARNING, no entry stored in dbm for [ENSG00000248503.2]
WARNING, no entry stored in dbm for [ENSG00000251595.7]
WARNING, no entry stored in dbm for [ENSG00000254092.2]
* STAR-Fusion complete. See output: /tmp/nxf.hcQnTjIbJB/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)