File Info
- Filename
- SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1.starfusion.starfusion.fusion_predictions.tsv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0011/B23LG7FLT4/nfcore_rnafusion__2cae617--20260515-145204/starfusion/SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1.starfusion.starfusion.fusion_predictions.tsv
- Size
- 52.6 KB
- Workflow Run
- dev_rna_exp0011-2cae617
- Published
- May 16, 2026 1:46 AM
Content
View in new tab| #FusionName | JunctionReadCount | SpanningFragCount | est_J | est_S | SpliceType | LeftGene | LeftBreakpoint | RightGene | RightBreakpoint | JunctionReads | SpanningFrags | LargeAnchorSupport | FFPM | LeftBreakDinuc | LeftBreakEntropy | RightBreakDinuc | RightBreakEntropy | annots |
| ANKMY1--GPC1 | 3 | 0 | 3.00 | 0.00 | ONLY_REF_SPLICE | ANKMY1^ENSG00000144504.15 | chr2:240560731:- | GPC1^ENSG00000063660.9 | chr2:240459030:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:2:1214:38991:20225,&SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:2:2102:51223:16442,&SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:3:2133:1752:18333 | . | YES_LDAS | 0.437 | GT | 1.8062 | AG | 1.8892 | ["INTRACHROMOSOMAL[chr2:0.01Mb]","LOCAL_INVERSION:-:+:[11346]"] |
| AC104123.1--CAST | 3 | 0 | 3.00 | 0.00 | ONLY_REF_SPLICE | AC104123.1^ENSG00000251314.2 | chr5:96379652:+ | CAST^ENSG00000153113.24 | chr5:96675539:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:1439:32147:2738,&SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:2373:2084:27455,&SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:3:1324:26095:7418 | . | YES_LDAS | 0.437 | GT | 1.7819 | AG | 1.8295 | ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr5:0.11Mb]"] |
| SYT1--CORO7 | 2 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | SYT1^ENSG00000067715.14 | chr12:79291828:+ | CORO7^ENSG00000262246.6 | chr16:4362780:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:2:2484:33174:1154,&SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:3:2382:32964:2611 | . | NO_LDAS | 0.1457 | GT | 1.8323 | AG | 1.9329 | ["INTERCHROMOSOMAL[chr12--chr16]"] |
| ST3GAL4--IDO1 | 2 | 0 | 2.00 | 0.00 | INCL_NON_REF_SPLICE | ST3GAL4^ENSG00000110080.20 | chr11:126408194:+ | IDO1^ENSG00000131203.13 | chr8:39913049:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:1291:46765:17492,&SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:2189:17520:27707 | . | NO_LDAS | 0.2913 | GT | 1.9656 | AG | 1.9329 | ["INTERCHROMOSOMAL[chr11--chr8]"] |
| RORA--USP50 | 2 | 0 | 2.00 | 0.00 | ONLY_REF_SPLICE | RORA^ENSG00000069667.16 | chr15:61229053:- | USP50^ENSG00000170236.16 | chr15:50538851:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:1162:51012:24877,&SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:2:1215:14632:26881 | . | YES_LDAS | 0.2913 | GT | 1.5656 | AG | 1.9656 | ["INTRACHROMOSOMAL[chr15:9.94Mb]"] |
| PJA2--IGL-@-ext | 2 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | PJA2^ENSG00000198961.10 | chr5:109409956:- | IGL-@-ext^IGL-.g@-ext | chr22:22474257:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:1211:4907:11019,&SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:2244:29525:17535 | . | NO_LDAS | 0.0728 | CA | 1.1589 | GC | 1.2419 | ["INTERCHROMOSOMAL[chr5--chr22]"] |
| NRIP3--TNFSF13 | 2 | 0 | 2.00 | 0.00 | INCL_NON_REF_SPLICE | NRIP3^ENSG00000175352.11 | chr11:9003966:- | TNFSF13^ENSG00000161955.16 | chr17:7559086:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:3:1266:34112:13373,&SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:3:1405:41450:7726 | . | NO_LDAS | 0.2913 | GT | 1.3383 | AG | 1.7465 | ["INTERCHROMOSOMAL[chr11--chr17]"] |
| MT-ND6--MTRNR2L7 | 2 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | MT-ND6^ENSG00000198695.2 | chrM:14150:- | MTRNR2L7^ENSG00000256892.2 | chr10:37602222:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:2:1204:15797:28562,&SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:4:2146:5951:29753 | . | YES_LDAS | 0.0728 | GT | 1.8295 | AG | 1.3753 | ["INTERCHROMOSOMAL[chrM--chr10]"] |
| MT-ND6--MTRNR2L12 | 2 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | MT-ND6^ENSG00000198695.2 | chrM:14150:- | MTRNR2L12^ENSG00000269028.3 | chr3:96617452:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:2:1204:15797:28562,&SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:4:2146:5951:29753 | . | YES_LDAS | 0.0728 | GT | 1.8295 | AG | 1.2419 | ["INTERCHROMOSOMAL[chrM--chr3]"] |
| IGL@-ext--LATS1 | 2 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | IGL@-ext^IGL.g@-ext | chr22:22474257:+ | LATS1^ENSG00000131023.13 | chr6:149718061:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:1211:4907:11019,&SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:2244:29525:17535 | . | NO_LDAS | 0.0728 | GC | 1.2419 | AA | 1.1589 | ["INTERCHROMOSOMAL[chr22--chr6]"] |
| IGL@-ext--INTS10 | 2 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | IGL@-ext^IGL.g@-ext | chr22:22474257:+ | INTS10^ENSG00000104613.12 | chr8:19817443:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:1211:4907:11019,&SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:2244:29525:17535 | . | NO_LDAS | 0.0728 | GC | 1.2419 | GG | 1.1589 | ["INTERCHROMOSOMAL[chr22--chr8]"] |
| HLA-C--AKAP5 | 2 | 0 | 2.00 | 0.00 | INCL_NON_REF_SPLICE | HLA-C^ENSG00000204525.17 | chr6:31269493:- | AKAP5^ENSG00000179841.8 | chr14:64469233:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:1169:41474:25059,&SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:2:2342:22697:27707 | . | NO_LDAS | 0.2913 | GT | 1.8256 | AG | 1.8323 | ["INTERCHROMOSOMAL[chr6--chr14]"] |
| FANCL--AC022079.2 | 2 | 0 | 2.00 | 0.00 | INCL_NON_REF_SPLICE | FANCL^ENSG00000115392.12 | chr2:58160097:- | AC022079.2^ENSG00000278733.1 | chr12:28186149:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:2:2401:35067:13009,&SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:4:1409:33676:3228 | . | NO_LDAS | 0.2913 | GT | 1.7465 | AG | 1.1033 | ["INTERCHROMOSOMAL[chr2--chr12]"] |
| AL358852.1--IGL-@-ext | 2 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | AL358852.1^ENSG00000278899.1 | chr6:149718061:+ | IGL-@-ext^IGL-.g@-ext | chr22:22474257:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:1211:4907:11019,&SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:2244:29525:17535 | . | NO_LDAS | 0.0728 | TT | 1.1589 | GC | 1.2419 | ["INTERCHROMOSOMAL[chr6--chr22]"] |
| AC020922.2--EPS15L1 | 2 | 0 | 2.00 | 0.00 | INCL_NON_REF_SPLICE | AC020922.2^ENSG00000268729.1 | chr19:55312075:- | EPS15L1^ENSG00000127527.14 | chr19:16471991:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:2230:21322:22187,&SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:2:2365:22972:7165 | . | NO_LDAS | 0.2913 | GT | 1.1033 | AG | 1.1033 | ["INTRACHROMOSOMAL[chr19:38.84Mb]"] |
| ZFAT--SRRM2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | ZFAT^ENSG00000066827.16 | chr8:134509658:- | SRRM2^ENSG00000167978.17 | chr16:2762973:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:1161:11371:26278 | . | NO_LDAS | 0.1457 | GT | 1.5656 | AG | 1.7056 | ["INTERCHROMOSOMAL[chr8--chr16]"] |
| Z95114.1--SCYL1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | Z95114.1^ENSG00000279217.1 | chr22:36074848:+ | SCYL1^ENSG00000142186.17 | chr11:65525438:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:2:1410:26734:23041 | . | NO_LDAS | 0.1457 | GT | 1.0530 | AG | 1.3383 | ["INTERCHROMOSOMAL[chr22--chr11]"] |
| Z95114.1--GJB4 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | Z95114.1^ENSG00000279217.1 | chr22:36074848:+ | GJB4^ENSG00000189433.7 | chr1:34761624:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:4:2216:41151:16736 | . | NO_LDAS | 0.1457 | GT | 1.0530 | AG | 1.5546 | ["INTERCHROMOSOMAL[chr22--chr1]"] |
| Z95114.1--FOXG1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | Z95114.1^ENSG00000279217.1 | chr22:36074848:+ | FOXG1^ENSG00000176165.12 | chr14:28767641:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:1103:37486:9463 | . | NO_LDAS | 0.1457 | GT | 1.0530 | AG | 1.4716 | ["INTERCHROMOSOMAL[chr22--chr14]"] |
| XG--ZFY | 1 | 0 | 0.50 | 0.00 | ONLY_REF_SPLICE | XG^ENSG00000124343.14 | chrX:2774739:+ | ZFY^ENSG00000067646.12 | chrY:2953909:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:2:1388:49775:1098 | . | NO_LDAS | 0.0728 | GT | 1.7465 | AG | 1.9329 | ["INTERCHROMOSOMAL[chrX--chrY]"] |
| WNT4--LIG1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | WNT4^ENSG00000162552.15 | chr1:22142846:- | LIG1^ENSG00000105486.14 | chr19:48150172:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:4:1297:18434:27637 | . | NO_LDAS | 0.1457 | GT | 1.9086 | AG | 1.8062 | ["INTERCHROMOSOMAL[chr1--chr19]"] |
| UMAD1--GLCCI1 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | UMAD1^ENSG00000219545.11 | chr7:7801743:+ | GLCCI1^ENSG00000106415.13 | chr7:8003908:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:2:1312:34889:22537 | . | NO_LDAS | 0.1457 | GT | 1.9656 | AG | 1.7465 | ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr7:0.00Mb]","NEIGHBORS[776]"] |
| UBE2J2--ARHGEF4 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | UBE2J2^ENSG00000160087.21 | chr1:1273469:- | ARHGEF4^ENSG00000136002.20 | chr2:130916130:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:1407:2238:12140 | . | NO_LDAS | 0.0728 | GT | 1.6895 | AG | 1.5301 | ["INTERCHROMOSOMAL[chr1--chr2]"] |
| TSEN54--AC008875.3 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | TSEN54^ENSG00000182173.14 | chr17:75516931:+ | AC008875.3^ENSG00000287263.1 | chr5:42991727:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:4:2203:45705:21038 | . | NO_LDAS | 0.0728 | GT | 1.1589 | AG | 1.7056 | ["INTERCHROMOSOMAL[chr17--chr5]"] |
| TRIM52--PMS1 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | TRIM52^ENSG00000183718.5 | chr5:181260001:- | PMS1^ENSG00000064933.18 | chr2:189791790:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:1370:17334:1967 | . | YES_LDAS | 0.1457 | GT | 1.8892 | AG | 1.9656 | ["INTERCHROMOSOMAL[chr5--chr2]"] |
| TPM3--TCHH | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | TPM3^ENSG00000143549.21 | chr1:154183129:- | TCHH^ENSG00000159450.12 | chr1:152111746:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:1257:22633:16722 | . | NO_LDAS | 0.1457 | GT | 1.8295 | AG | 1.6402 | ["INTRACHROMOSOMAL[chr1:2.04Mb]"] |
| TNRC6B--RFPL3S | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | TNRC6B^ENSG00000100354.21 | chr22:40331279:+ | RFPL3S^ENSG00000205853.12 | chr22:32363904:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:3:1374:9972:5498 | . | NO_LDAS | 0.1457 | GT | 1.5301 | AG | 1.5058 | ["INTRACHROMOSOMAL[chr22:7.66Mb]"] |
| TMC4--IGH@-ext | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | TMC4^ENSG00000167608.12 | chr19:54168416:- | IGH@-ext^IGH.g@-ext | chr14:106719406:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:3:1286:25011:26054 | . | NO_LDAS | 0.1457 | CC | 1.7819 | TT | 1.2419 | ["INTERCHROMOSOMAL[chr19--chr14]"] |
| TLE5--CREBBP | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | TLE5^ENSG00000104964.15 | chr19:3054120:- | CREBBP^ENSG00000005339.15 | chr16:3725438:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:2:1187:35528:9604 | . | NO_LDAS | 0.1457 | GT | 1.8256 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr19--chr16]"] |
| TBL1X--TBL1YP1 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | TBL1X^ENSG00000101849.17 | chrX:9709322:+ | TBL1YP1^ENSG00000225624.1 | chrY:20741311:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:2108:25432:14704 | . | NO_LDAS | 0.1457 | GT | 1.8892 | AG | 1.8256 | ["INTERCHROMOSOMAL[chrX--chrY]"] |
| TAOK1--MFSD13A | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | TAOK1^ENSG00000160551.12 | chr17:29547021:+ | MFSD13A^ENSG00000138111.14 | chr10:102476043:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:1287:27373:13499 | . | NO_LDAS | 0.1457 | GT | 1.8323 | AG | 0.5665 | ["INTERCHROMOSOMAL[chr17--chr10]"] |
| SYT2--PIEZO1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | SYT2^ENSG00000143858.12 | chr1:202603057:- | PIEZO1^ENSG00000103335.22 | chr16:88720704:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:2474:50033:20883 | . | NO_LDAS | 0.1457 | GC | 0.9968 | AG | 1.5219 | ["INTERCHROMOSOMAL[chr1--chr16]"] |
| SPPL2B--ATP1A3 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | SPPL2B^ENSG00000005206.17 | chr19:2344012:+ | ATP1A3^ENSG00000105409.19 | chr19:41970477:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:1275:38966:9926 | . | NO_LDAS | 0.1457 | GT | 1.7819 | AG | 1.7968 | ["INTRACHROMOSOMAL[chr19:39.61Mb]"] |
| SLC35E1--BMPR2 | 1 | 0 | 0.20 | 0.00 | INCL_NON_REF_SPLICE | SLC35E1^ENSG00000127526.15 | chr19:16572278:- | BMPR2^ENSG00000204217.15 | chr2:202376507:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:3:2472:41029:16526 | . | NO_LDAS | 0.0291 | GT | 1.2310 | AG | 1.4566 | ["INTERCHROMOSOMAL[chr19--chr2]"] |
| SLC16A3--IL17D | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | SLC16A3^ENSG00000141526.18 | chr17:82231808:+ | IL17D^ENSG00000172458.4 | chr13:20704229:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:1483:5110:12098 | . | NO_LDAS | 0.1457 | GT | 1.1589 | AG | 1.2310 | ["INTERCHROMOSOMAL[chr17--chr13]"] |
| SILC1--MT-ND5 | 1 | 0 | 0.33 | 0.00 | INCL_NON_REF_SPLICE | SILC1^ENSG00000232044.7 | chr2:5971270:+ | MT-ND5^ENSG00000198786.2 | chrM:12998:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:3:1436:17350:9618 | . | NO_LDAS | 0.0481 | GT | 1.8256 | AG | 1.7819 | ["INTERCHROMOSOMAL[chr2--chrM]"] |
| SHROOM1--PLEKHM2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | SHROOM1^ENSG00000164403.15 | chr5:132825431:- | PLEKHM2^ENSG00000116786.13 | chr1:15684502:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:2:1138:21225:23055 | . | NO_LDAS | 0.1457 | GC | 1.1033 | AG | 0.9183 | ["INTERCHROMOSOMAL[chr5--chr1]"] |
| SH2B3--RN7SL4P | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | SH2B3^ENSG00000111252.11 | chr12:111418331:+ | RN7SL4P^ENSG00000263740.2 | chr3:15738565:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:2:2202:33821:29095 | . | NO_LDAS | 0.0728 | GT | 1.7056 | AG | 1.7968 | ["INTERCHROMOSOMAL[chr12--chr3]"] |
| SH2B3--AL627171.2 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | SH2B3^ENSG00000111252.11 | chr12:111418331:+ | AL627171.2^ENSG00000282885.2 | chr14:49862799:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:2:2202:33821:29095 | . | NO_LDAS | 0.0728 | GT | 1.7056 | AG | 1.7968 | ["INTERCHROMOSOMAL[chr12--chr14]"] |
| SFTPA1--COL5A1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | SFTPA1^ENSG00000122852.15 | chr10:79611997:+ | COL5A1^ENSG00000130635.16 | chr9:134798418:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:3:1145:10894:21220 | . | YES_LDAS | 0.1457 | GT | 1.7232 | AG | 1.9329 | ["INTERCHROMOSOMAL[chr10--chr9]"] |
| SEMA4D--MAPK6 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | SEMA4D^ENSG00000187764.12 | chr9:89497919:- | MAPK6^ENSG00000069956.13 | chr15:52045830:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:1336:20586:6759 | . | NO_LDAS | 0.1457 | GT | 1.6895 | AG | 1.8256 | ["INTERCHROMOSOMAL[chr9--chr15]"] |
| SELENOS--BMPR2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | SELENOS^ENSG00000131871.15 | chr15:101277421:- | BMPR2^ENSG00000204217.15 | chr2:202376513:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:3:2262:39460:5316 | . | NO_LDAS | 0.1457 | GT | 0.9183 | AG | 0.9183 | ["INTERCHROMOSOMAL[chr15--chr2]"] |
| SECISBP2L--GBP5 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | SECISBP2L^ENSG00000138593.9 | chr15:48989802:- | GBP5^ENSG00000154451.14 | chr1:89262755:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:2:2148:42146:2569 | . | NO_LDAS | 0.1457 | GT | 1.7819 | AG | 1.9656 | ["INTERCHROMOSOMAL[chr15--chr1]"] |
| SART3--GULP1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | SART3^ENSG00000075856.12 | chr12:108560910:- | GULP1^ENSG00000144366.16 | chr2:188291860:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:2172:27681:10893 | . | NO_LDAS | 0.1457 | GT | 1.7056 | AG | 1.3383 | ["INTERCHROMOSOMAL[chr12--chr2]"] |
| SAMD14--IGH@-ext | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | SAMD14^ENSG00000167100.15 | chr17:50129845:- | IGH@-ext^IGH.g@-ext | chr14:106419214:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:2:2282:23248:29417 | . | YES_LDAS | 0.1457 | GT | 0.9968 | TT | 0.9968 | ["INTERCHROMOSOMAL[chr17--chr14]"] |
| RTF2--ZNF274 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | RTF2^ENSG00000022277.13 | chr20:56516186:+ | ZNF274^ENSG00000171606.18 | chr19:58212862:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:1311:24040:4643 | . | NO_LDAS | 0.1457 | GT | 1.7465 | AG | 1.9086 | ["INTERCHROMOSOMAL[chr20--chr19]"] |
| RRM2--ATAD2B | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | RRM2^ENSG00000171848.16 | chr2:10142375:+ | ATAD2B^ENSG00000119778.15 | chr2:23895970:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:1241:51506:5078 | . | NO_LDAS | 0.1457 | GT | 1.9656 | AG | 1.5656 | ["INTRACHROMOSOMAL[chr2:13.54Mb]"] |
| RNVU1-29--DST | 1 | 0 | 0.09 | 0.00 | INCL_NON_REF_SPLICE | RNVU1-29^ENSG00000273768.1 | chr1:146376953:+ | DST^ENSG00000151914.21 | chr6:56620492:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:1171:30197:24583 | . | YES_LDAS | 0.0131 | GT | 1.7232 | AG | 1.9329 | ["INTERCHROMOSOMAL[chr1--chr6]"] |
| RNVU1-28--DST | 1 | 0 | 0.09 | 0.00 | INCL_NON_REF_SPLICE | RNVU1-28^ENSG00000277918.1 | chr1:144560683:- | DST^ENSG00000151914.21 | chr6:56620492:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:1171:30197:24583 | . | YES_LDAS | 0.0131 | GT | 1.7232 | AG | 1.9329 | ["INTERCHROMOSOMAL[chr1--chr6]"] |
| RNVU1-18--DST | 1 | 0 | 0.09 | 0.00 | INCL_NON_REF_SPLICE | RNVU1-18^ENSG00000206737.1 | chr1:143729424:- | DST^ENSG00000151914.21 | chr6:56620492:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:1171:30197:24583 | . | YES_LDAS | 0.0131 | GT | 1.7232 | AG | 1.9329 | ["INTERCHROMOSOMAL[chr1--chr6]"] |
| RNVU1-1--DST | 1 | 0 | 0.09 | 0.00 | INCL_NON_REF_SPLICE | RNVU1-1^ENSG00000207340.1 | chr1:148362387:- | DST^ENSG00000151914.21 | chr6:56620492:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:1171:30197:24583 | . | YES_LDAS | 0.0131 | GT | 1.7232 | AG | 1.9329 | ["INTERCHROMOSOMAL[chr1--chr6]"] |
| RNU1-4--DST | 1 | 0 | 0.09 | 0.00 | INCL_NON_REF_SPLICE | RNU1-4^ENSG00000207389.1 | chr1:16740662:+ | DST^ENSG00000151914.21 | chr6:56620492:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:1171:30197:24583 | . | YES_LDAS | 0.0131 | GT | 1.7232 | AG | 1.9329 | ["INTERCHROMOSOMAL[chr1--chr6]"] |
| RNU1-3--DST | 1 | 0 | 0.09 | 0.00 | INCL_NON_REF_SPLICE | RNU1-3^ENSG00000207513.1 | chr1:16666802:- | DST^ENSG00000151914.21 | chr6:56620492:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:1171:30197:24583 | . | YES_LDAS | 0.0131 | GT | 1.7232 | AG | 1.9329 | ["INTERCHROMOSOMAL[chr1--chr6]"] |
| RNU1-28P--DST | 1 | 0 | 0.09 | 0.00 | INCL_NON_REF_SPLICE | RNU1-28P^ENSG00000206588.1 | chr14:34556243:- | DST^ENSG00000151914.21 | chr6:56620492:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:1171:30197:24583 | . | YES_LDAS | 0.0131 | GT | 1.7232 | AG | 1.9329 | ["INTERCHROMOSOMAL[chr14--chr6]"] |
| RNU1-27P--DST | 1 | 0 | 0.09 | 0.00 | INCL_NON_REF_SPLICE | RNU1-27P^ENSG00000206596.1 | chr14:34546860:+ | DST^ENSG00000151914.21 | chr6:56620492:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:1171:30197:24583 | . | YES_LDAS | 0.0131 | GT | 1.7232 | AG | 1.9329 | ["INTERCHROMOSOMAL[chr14--chr6]"] |
| RNU1-2--DST | 1 | 0 | 0.09 | 0.00 | INCL_NON_REF_SPLICE | RNU1-2^ENSG00000207005.1 | chr1:16896126:+ | DST^ENSG00000151914.21 | chr6:56620492:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:1171:30197:24583 | . | YES_LDAS | 0.0131 | GT | 1.7232 | AG | 1.9329 | ["INTERCHROMOSOMAL[chr1--chr6]"] |
| RNU1-1--DST | 1 | 0 | 0.09 | 0.00 | INCL_NON_REF_SPLICE | RNU1-1^ENSG00000206652.1 | chr1:16514139:- | DST^ENSG00000151914.21 | chr6:56620492:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:1171:30197:24583 | . | YES_LDAS | 0.0131 | GT | 1.7232 | AG | 1.9329 | ["INTERCHROMOSOMAL[chr1--chr6]"] |
| RN7SL741P--RN7SL3 | 1 | 0 | 0.20 | 0.00 | INCL_NON_REF_SPLICE | RN7SL741P^ENSG00000242381.3 | chr13:25944643:+ | RN7SL3^ENSG00000278771.1 | chr14:49853737:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:2:2446:44880:3074 | . | NO_LDAS | 0.0291 | GT | 1.9656 | AG | 1.7819 | ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr13--chr14]"] |
| RN7SL741P--AL627171.2 | 1 | 0 | 0.20 | 0.00 | INCL_NON_REF_SPLICE | RN7SL741P^ENSG00000242381.3 | chr13:25944643:+ | AL627171.2^ENSG00000282885.2 | chr14:49862672:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:2:2446:44880:3074 | . | NO_LDAS | 0.0291 | GT | 1.9656 | AG | 1.7819 | ["INTERCHROMOSOMAL[chr13--chr14]"] |
| RN7SL724P--RN7SL3 | 1 | 0 | 0.20 | 0.00 | INCL_NON_REF_SPLICE | RN7SL724P^ENSG00000244692.3 | chr3:139609792:- | RN7SL3^ENSG00000278771.1 | chr14:49853737:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:2:2446:44880:3074 | . | NO_LDAS | 0.0291 | GT | 1.9656 | AG | 1.7819 | ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr3--chr14]"] |
| RN7SL652P--RN7SL3 | 1 | 0 | 0.20 | 0.00 | INCL_NON_REF_SPLICE | RN7SL652P^ENSG00000265559.2 | chr11:47557657:- | RN7SL3^ENSG00000278771.1 | chr14:49853737:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:2:2446:44880:3074 | . | NO_LDAS | 0.0291 | GT | 1.9656 | AG | 1.7819 | ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr11--chr14]"] |
| RN7SL652P--AL627171.2 | 1 | 0 | 0.20 | 0.00 | INCL_NON_REF_SPLICE | RN7SL652P^ENSG00000265559.2 | chr11:47557657:- | AL627171.2^ENSG00000282885.2 | chr14:49862672:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:2:2446:44880:3074 | . | NO_LDAS | 0.0291 | GT | 1.9656 | AG | 1.7819 | ["INTERCHROMOSOMAL[chr11--chr14]"] |
| RN7SKP162--RN7SKP296 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | RN7SKP162^ENSG00000200475.1 | chr12:13683734:+ | RN7SKP296^ENSG00000223117.1 | chr3:190642358:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:4:2105:43828:11565 | . | NO_LDAS | 0.1457 | GT | 1.9086 | AG | 1.9329 | ["INTERCHROMOSOMAL[chr12--chr3]"] |
| RN7SKP134--RN7SKP173 | 1 | 0 | 0.17 | 0.00 | INCL_NON_REF_SPLICE | RN7SKP134^ENSG00000200830.1 | chr12:14553729:- | RN7SKP173^ENSG00000199691.1 | chr20:38761716:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:4:1467:3953:23490 | . | YES_LDAS | 0.0248 | GT | 1.7465 | AG | 1.9899 | ["INTERCHROMOSOMAL[chr12--chr20]"] |
| REPS2--EPS15L1 | 1 | 0 | 0.33 | 0.00 | INCL_NON_REF_SPLICE | REPS2^ENSG00000169891.18 | chrX:16947083:+ | EPS15L1^ENSG00000127527.14 | chr19:16471991:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:4:1326:40342:22621 | . | NO_LDAS | 0.0481 | GT | 0.9710 | AG | 1.1033 | ["HGNC_GENEFAM","INTERCHROMOSOMAL[chrX--chr19]"] |
| RDXP3--LINC02223 | 1 | 0 | 0.33 | 0.00 | INCL_NON_REF_SPLICE | RDXP3^ENSG00000238247.2 | chrX:27519057:+ | LINC02223^ENSG00000249937.8 | chr5:17931982:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:4:2326:49386:16708 | . | NO_LDAS | 0.0481 | GT | 1.9086 | AG | 1.9329 | ["INTERCHROMOSOMAL[chrX--chr5]"] |
| RBM3--DNAJC24 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | RBM3^ENSG00000102317.18 | chrX:48580656:+ | DNAJC24^ENSG00000170946.15 | chr11:31431415:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:1168:1275:19833 | . | YES_LDAS | 0.1457 | GT | 1.7232 | AG | 1.7968 | ["INTERCHROMOSOMAL[chrX--chr11]"] |
| RBM14--RBM4B | 1 | 0 | 0.50 | 0.00 | ONLY_REF_SPLICE | RBM14^ENSG00000239306.5 | chr11:66617057:+ | RBM4B^ENSG00000173914.12 | chr11:66677091:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:4:1365:50131:14998 | . | YES_LDAS | 0.0728 | GT | 1.7465 | AG | 1.9086 | ["Klijn_CellLines","HGNC_GENEFAM","INTRACHROMOSOMAL[chr11:0.04Mb]","LOCAL_INVERSION:+:-:[35064]"] |
| RBM14--RBM4 | 1 | 0 | 0.50 | 0.00 | ONLY_REF_SPLICE | RBM14^ENSG00000239306.5 | chr11:66617057:+ | RBM4^ENSG00000173933.21 | chr11:66639700:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:4:1365:50131:14998 | . | YES_LDAS | 0.0728 | GT | 1.7465 | AG | 1.9086 | ["HGNC_GENEFAM","Greger_Normal","INTRACHROMOSOMAL[chr11:0.01Mb]","NEIGHBORS[8733]"] |
| PTPA--AL158151.1 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | PTPA^ENSG00000119383.21 | chr9:129142552:+ | AL158151.1^ENSG00000204055.5 | chr9:129208869:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:1424:31297:21668 | . | NO_LDAS | 0.1457 | GT | 1.9086 | AG | 1.7968 | ["INTRACHROMOSOMAL[chr9:0.03Mb]","NEIGHBORS[26861]"] |
| PRNP--PROX1-AS1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | PRNP^ENSG00000171867.18 | chr20:4686439:+ | PROX1-AS1^ENSG00000230461.9 | chr1:213988457:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:1325:43497:22257 | . | NO_LDAS | 0.1457 | GT | 1.1589 | AG | 0.9968 | ["INTERCHROMOSOMAL[chr20--chr1]"] |
| PPP6R2--TTN | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | PPP6R2^ENSG00000100239.16 | chr22:50439857:+ | TTN^ENSG00000155657.28 | chr2:178604272:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:3:2129:27907:10893 | . | NO_LDAS | 0.1457 | GT | 1.8323 | AG | 1.9656 | ["INTERCHROMOSOMAL[chr22--chr2]"] |
| POU3F3--KCTD12 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | POU3F3^ENSG00000198914.5 | chr2:104855486:+ | KCTD12^ENSG00000178695.6 | chr13:76886307:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:2159:39096:19090 | . | YES_LDAS | 0.0728 | GT | 1.2419 | AG | 1.4256 | ["INTERCHROMOSOMAL[chr2--chr13]"] |
| POLR2J2--AC004951.2 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | POLR2J2^ENSG00000228049.7 | chr7:102665662:- | AC004951.2^ENSG00000239556.4 | chr7:43988247:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:2:1177:22908:7334 | . | YES_LDAS | 0.0728 | GT | 1.9329 | AG | 1.7465 | ["INTRACHROMOSOMAL[chr7:58.68Mb]"] |
| POLE--AC010332.3 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | POLE^ENSG00000177084.18 | chr12:132650320:- | AC010332.3^ENSG00000288253.1 | chr19:52454148:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:4:1132:38376:14424 | . | NO_LDAS | 0.1457 | GT | 1.8256 | AG | 1.6402 | ["INTERCHROMOSOMAL[chr12--chr19]"] |
| PLEC--TSC1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | PLEC^ENSG00000178209.16 | chr8:143922177:- | TSC1^ENSG00000165699.15 | chr9:132900813:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:1218:43521:11509 | . | NO_LDAS | 0.1457 | GT | 1.7465 | AG | 1.9656 | ["INTERCHROMOSOMAL[chr8--chr9]"] |
| PLEC--SOX13 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | PLEC^ENSG00000178209.16 | chr8:143922177:- | SOX13^ENSG00000143842.15 | chr1:204116641:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:1279:24307:14466 | . | NO_LDAS | 0.1457 | GT | 1.7465 | AG | 1.7819 | ["INTERCHROMOSOMAL[chr8--chr1]"] |
| PITHD1--EPS15 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | PITHD1^ENSG00000057757.10 | chr1:23779941:+ | EPS15^ENSG00000085832.17 | chr1:51465326:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:4:1234:14858:6871 | . | YES_LDAS | 0.1457 | GT | 1.9899 | AG | 1.9656 | ["INTRACHROMOSOMAL[chr1:27.57Mb]"] |
| PDK1--WDFY3 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | PDK1^ENSG00000152256.14 | chr2:172596023:+ | WDFY3^ENSG00000163625.16 | chr4:84803467:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:1230:44079:4909 | . | YES_LDAS | 0.1457 | GT | 1.5219 | AG | 1.9329 | ["INTERCHROMOSOMAL[chr2--chr4]"] |
| PDE3A--TSPAN33 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | PDE3A^ENSG00000172572.7 | chr12:20369240:+ | TSPAN33^ENSG00000158457.6 | chr7:129144951:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:3:1136:2594:7796 | . | NO_LDAS | 0.1457 | GT | 1.0530 | AG | 1.2729 | ["INTERCHROMOSOMAL[chr12--chr7]"] |
| NFIC--NFIA | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | NFIC^ENSG00000141905.19 | chr19:3366666:+ | NFIA^ENSG00000162599.17 | chr1:61088149:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:2:2318:22285:10262 | . | NO_LDAS | 0.1457 | GT | 1.7232 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr19--chr1]"] |
| NCOR2--UBC | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | NCOR2^ENSG00000196498.13 | chr12:124518140:- | UBC^ENSG00000150991.15 | chr12:124913774:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:2:1408:31896:23350 | . | YES_LDAS | 0.1457 | GT | 1.7819 | AG | 1.9329 | ["GTEx_recurrent_StarF2019","ChimerSeq","INTRACHROMOSOMAL[chr12:0.34Mb]"] |
| MVK--RABGAP1L | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | MVK^ENSG00000110921.14 | chr12:109591357:+ | RABGAP1L^ENSG00000152061.23 | chr1:174700480:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:1354:7723:25283 | . | NO_LDAS | 0.1457 | GT | 1.9899 | AG | 1.9329 | ["INTERCHROMOSOMAL[chr12--chr1]"] |
| MNT--GRAP | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | MNT^ENSG00000070444.15 | chr17:2401087:- | GRAP^ENSG00000154016.14 | chr17:19021699:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:3:1450:32349:5246 | . | NO_LDAS | 0.1457 | GT | 1.5058 | AG | 1.7232 | ["INTRACHROMOSOMAL[chr17:16.62Mb]"] |
| MED20--USP49 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | MED20^ENSG00000124641.16 | chr6:41907016:- | USP49^ENSG00000164663.14 | chr6:41871637:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:2:1237:18175:16512 | . | YES_LDAS | 0.1457 | GT | 1.5656 | AG | 1.4295 | ["Babiceanu_Normal","INTRACHROMOSOMAL[chr6:0.01Mb]","NEIGHBORS[9993]"] |
| MAZ--TAF3 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | MAZ^ENSG00000103495.14 | chr16:29806893:+ | TAF3^ENSG00000165632.8 | chr10:8009109:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:1284:11371:13835 | . | NO_LDAS | 0.0728 | GT | 1.9656 | AG | 1.3996 | ["INTERCHROMOSOMAL[chr16--chr10]"] |
| MAU2--IQCJ | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | MAU2^ENSG00000129933.21 | chr19:19343997:+ | IQCJ^ENSG00000214216.11 | chr3:158962977:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:2:1248:4438:12084 | . | NO_LDAS | 0.1457 | GT | 1.9086 | AG | 1.6402 | ["INTERCHROMOSOMAL[chr19--chr3]"] |
| MALRD1--PLXDC2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | MALRD1^ENSG00000204740.11 | chr10:19790186:+ | PLXDC2^ENSG00000120594.17 | chr10:20001775:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:2124:25885:6549 | . | YES_LDAS | 0.1457 | GT | 1.8256 | AG | 1.8062 | ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr10:0.03Mb]","NEIGHBORS[25838]"] |
| MACROH2A2--NUP85 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | MACROH2A2^ENSG00000099284.15 | chr10:70065189:+ | NUP85^ENSG00000125450.11 | chr17:75231340:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:2274:38821:13849 | . | YES_LDAS | 0.1457 | GT | 1.9329 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr10--chr17]"] |
| LYSMD3--ATG2A | 1 | 0 | 0.33 | 0.00 | INCL_NON_REF_SPLICE | LYSMD3^ENSG00000176018.13 | chr5:90529551:- | ATG2A^ENSG00000110046.13 | chr11:64909067:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:3:2103:21524:11775 | . | NO_LDAS | 0.0481 | GT | 1.2419 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr5--chr11]"] |
| LYSMD3--ARHGEF34P | 1 | 0 | 0.20 | 0.00 | INCL_NON_REF_SPLICE | LYSMD3^ENSG00000176018.13 | chr5:90529551:- | ARHGEF34P^ENSG00000204959.4 | chr7:144285996:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:2:1304:21209:1560 | . | NO_LDAS | 0.0291 | GT | 1.2419 | AG | 0.9968 | ["INTERCHROMOSOMAL[chr5--chr7]"] |
| LUC7L2--UBN2 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | LUC7L2^ENSG00000146963.18 | chr7:139360322:+ | UBN2^ENSG00000157741.15 | chr7:139237005:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:1231:31645:28128 | . | YES_LDAS | 0.1457 | GT | 1.6895 | AG | 1.8892 | ["Klijn_CellLines","CCLE_StarF2019","INTRACHROMOSOMAL[chr7:0.03Mb]","LOCAL_REARRANGEMENT:+:[32123]"] |
| LRP12--AC009133.2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | LRP12^ENSG00000147650.12 | chr8:104588972:- | AC009133.2^ENSG00000259952.1 | chr16:29806507:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:3:1356:26087:15615 | . | NO_LDAS | 0.1457 | GT | 0.9183 | AG | 1.2867 | ["INTERCHROMOSOMAL[chr8--chr16]"] |
| LINGO1--NOTCH2 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | LINGO1^ENSG00000169783.13 | chr15:77632811:- | NOTCH2^ENSG00000134250.20 | chr1:120069445:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:2:2318:45592:23336 | . | NO_LDAS | 0.0728 | GT | 0.9183 | AG | 0.9183 | ["INTERCHROMOSOMAL[chr15--chr1]"] |
| LINC01750--IGH@-ext | 1 | 0 | 0.25 | 0.00 | INCL_NON_REF_SPLICE | LINC01750^ENSG00000231437.3 | chr1:111989882:+ | IGH@-ext^IGH.g@-ext | chr14:106721367:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:1270:31815:17997 | . | NO_LDAS | 0.0364 | TG | 1.1033 | CA | 1.1589 | ["INTERCHROMOSOMAL[chr1--chr14]"] |
| LINC00667--CLIP1 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | LINC00667^ENSG00000263753.8 | chr18:5239049:+ | CLIP1^ENSG00000130779.22 | chr12:122380558:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:2:1488:22843:9716 | . | YES_LDAS | 0.1457 | GT | 1.6402 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr18--chr12]"] |
| LENG9--IGL@-ext | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | LENG9^ENSG00000275183.2 | chr19:54461623:- | IGL@-ext^IGL.g@-ext | chr22:22388224:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:2420:50252:24064 | . | NO_LDAS | 0.0728 | AT | 0.8366 | AT | 1.3753 | ["INTERCHROMOSOMAL[chr19--chr22]"] |
| KRT1--NWD2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | KRT1^ENSG00000167768.4 | chr12:52675441:- | NWD2^ENSG00000174145.8 | chr4:37245027:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:1115:44314:21178 | . | NO_LDAS | 0.1457 | GT | 1.8323 | AG | 1.3753 | ["INTERCHROMOSOMAL[chr12--chr4]"] |
| KRT1--KRT79 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | KRT1^ENSG00000167768.4 | chr12:52676275:- | KRT79^ENSG00000185640.6 | chr12:52822379:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:2:2203:45681:13037 | . | NO_LDAS | 0.1457 | GT | 1.2867 | AG | 1.8062 | ["DGD_PARALOGS","HGNC_GENEFAM","INTRACHROMOSOMAL[chr12:0.14Mb]"] |
| KLHL14--TRAF5 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | KLHL14^ENSG00000197705.10 | chr18:32769899:- | TRAF5^ENSG00000082512.15 | chr1:211326712:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:2138:14009:25409 | . | NO_LDAS | 0.1457 | GT | 1.2419 | AG | 1.2366 | ["INTERCHROMOSOMAL[chr18--chr1]"] |
| KIAA1109--AFDN | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | KIAA1109^ENSG00000138688.16 | chr4:122343610:+ | AFDN^ENSG00000130396.20 | chr6:167948293:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:3:2181:41960:24358 | . | YES_LDAS | 0.1457 | GT | 1.7819 | AG | 1.7819 | ["INTERCHROMOSOMAL[chr4--chr6]"] |
| KCTD1--ALS2CL | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | KCTD1^ENSG00000134504.14 | chr18:26548293:- | ALS2CL^ENSG00000178038.17 | chr3:46680539:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:1321:47566:21570 | . | NO_LDAS | 0.1457 | GT | 1.2310 | AG | 1.9656 | ["INTERCHROMOSOMAL[chr18--chr3]"] |
| ITGAM--FAM32A | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | ITGAM^ENSG00000169896.18 | chr16:31331966:+ | FAM32A^ENSG00000105058.12 | chr19:16190531:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:2254:44419:1378 | . | NO_LDAS | 0.1457 | GT | 1.9086 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr16--chr19]"] |
| ILF3--SP1 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | ILF3^ENSG00000129351.17 | chr19:10681291:+ | SP1^ENSG00000185591.10 | chr12:53383092:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:2:2284:45107:26642 | . | NO_LDAS | 0.0728 | GT | 1.2310 | AG | 1.5301 | ["INTERCHROMOSOMAL[chr19--chr12]"] |
| IHH--KNSTRN | 1 | 0 | 0.20 | 0.00 | INCL_NON_REF_SPLICE | IHH^ENSG00000163501.7 | chr2:219060764:- | KNSTRN^ENSG00000128944.13 | chr15:40383336:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:1330:18555:19020 | . | NO_LDAS | 0.0291 | GC | 0.7219 | AG | 1.3996 | ["INTERCHROMOSOMAL[chr2--chr15]"] |
| IGL@-ext--MARF1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | IGL@-ext^IGL.g@-ext | chr22:22308497:+ | MARF1^ENSG00000166783.22 | chr16:15609697:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:4:1162:25529:25409 | . | NO_LDAS | 0.1457 | CT | 1.7968 | AC | 1.7465 | ["INTERCHROMOSOMAL[chr22--chr16]"] |
| IGL-@-ext--RAI1 | 1 | 0 | 0.17 | 0.00 | INCL_NON_REF_SPLICE | IGL-@-ext^IGL-.g@-ext | chr22:22397043:- | RAI1^ENSG00000108557.19 | chr17:17796085:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:1337:44225:16792 | . | NO_LDAS | 0.0248 | GT | 1.0530 | CC | 1.5546 | ["INTERCHROMOSOMAL[chr22--chr17]"] |
| IGL-@-ext--RAI1 | 1 | 0 | 0.17 | 0.00 | INCL_NON_REF_SPLICE | IGL-@-ext^IGL-.g@-ext | chr22:22380892:- | RAI1^ENSG00000108557.19 | chr17:17796085:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:1337:44225:16792 | . | NO_LDAS | 0.0248 | GA | 1.1589 | CC | 1.5546 | ["INTERCHROMOSOMAL[chr22--chr17]"] |
| IGL-@-ext--RAI1 | 1 | 0 | 0.17 | 0.00 | INCL_NON_REF_SPLICE | IGL-@-ext^IGL-.g@-ext | chr22:22357807:- | RAI1^ENSG00000108557.19 | chr17:17796085:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:1337:44225:16792 | . | NO_LDAS | 0.0248 | GA | 1.1589 | CC | 1.5546 | ["INTERCHROMOSOMAL[chr22--chr17]"] |
| IGL-@-ext--MYO9B | 1 | 0 | 0.17 | 0.00 | INCL_NON_REF_SPLICE | IGL-@-ext^IGL-.g@-ext | chr22:22397043:- | MYO9B^ENSG00000099331.13 | chr19:17211760:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:1337:44225:16792 | . | NO_LDAS | 0.0248 | GT | 1.0530 | GC | 1.5546 | ["INTERCHROMOSOMAL[chr22--chr19]"] |
| IGL-@-ext--MYO9B | 1 | 0 | 0.17 | 0.00 | INCL_NON_REF_SPLICE | IGL-@-ext^IGL-.g@-ext | chr22:22380896:- | MYO9B^ENSG00000099331.13 | chr19:17211756:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:1337:44225:16792 | . | NO_LDAS | 0.0248 | GA | 1.1589 | CC | 1.1589 | ["INTERCHROMOSOMAL[chr22--chr19]"] |
| IGL-@-ext--MYO9B | 1 | 0 | 0.17 | 0.00 | INCL_NON_REF_SPLICE | IGL-@-ext^IGL-.g@-ext | chr22:22357811:- | MYO9B^ENSG00000099331.13 | chr19:17211756:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:1337:44225:16792 | . | NO_LDAS | 0.0248 | GA | 1.1589 | CC | 1.1589 | ["INTERCHROMOSOMAL[chr22--chr19]"] |
| IGL-@-ext--MTRNR2L1 | 1 | 0 | 0.33 | 0.00 | INCL_NON_REF_SPLICE | IGL-@-ext^IGL-.g@-ext | chr22:22093386:- | MTRNR2L1^ENSG00000256618.3 | chr17:22523881:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:2:2289:39080:29011 | . | NO_LDAS | 0.0481 | CC | 1.6895 | AA | 1.3710 | ["INTERCHROMOSOMAL[chr22--chr17]"] |
| IGL-@-ext--LENG8 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | IGL-@-ext^IGL-.g@-ext | chr22:22388224:- | LENG8^ENSG00000167615.17 | chr19:54461623:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:2420:50252:24064 | . | NO_LDAS | 0.0728 | AT | 1.3753 | AT | 0.8366 | ["INTERCHROMOSOMAL[chr22--chr19]"] |
| IGH@-ext--SENP6 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | IGH@-ext^IGH.g@-ext | chr14:105653317:- | SENP6^ENSG00000112701.18 | chr6:75666846:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:3:1184:24048:29095 | . | NO_LDAS | 0.1457 | CA | 1.8892 | AA | 1.9219 | ["INTERCHROMOSOMAL[chr14--chr6]"] |
| IGH@-ext--RECQL5 | 1 | 0 | 0.33 | 0.00 | INCL_NON_REF_SPLICE | IGH@-ext^IGH.g@-ext | chr14:105724119:- | RECQL5^ENSG00000108469.15 | chr17:75627403:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:2:1389:23183:8230 | . | NO_LDAS | 0.0481 | AG | 1.6895 | CA | 1.3996 | ["INTERCHROMOSOMAL[chr14--chr17]"] |
| IGH@-ext--RECQL5 | 1 | 0 | 0.33 | 0.00 | INCL_NON_REF_SPLICE | IGH@-ext^IGH.g@-ext | chr14:105605332:- | RECQL5^ENSG00000108469.15 | chr17:75627403:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:2:1389:23183:8230 | . | NO_LDAS | 0.0481 | AG | 1.6895 | CA | 1.3996 | ["INTERCHROMOSOMAL[chr14--chr17]"] |
| IGH@-ext--NPTN | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | IGH@-ext^IGH.g@-ext | chr14:105891457:- | NPTN^ENSG00000156642.17 | chr15:73597315:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:2:2420:51927:25171 | . | NO_LDAS | 0.1457 | CA | 1.5546 | TG | 1.9656 | ["INTERCHROMOSOMAL[chr14--chr15]"] |
| IGH@-ext--EIF3LP2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | IGH@-ext^IGH.g@-ext | chr14:105855205:- | EIF3LP2^ENSG00000233837.1 | chr10:42566813:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:2:1425:30035:26432 | . | NO_LDAS | 0.1457 | TC | 1.8062 | CT | 1.7819 | ["INTERCHROMOSOMAL[chr14--chr10]"] |
| IGH@-ext--BLOC1S1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | IGH@-ext^IGH.g@-ext | chr14:106511529:- | BLOC1S1^ENSG00000135441.7 | chr12:55716993:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:4:1188:9462:24821 | . | NO_LDAS | 0.1457 | TG | 1.9329 | TC | 1.9656 | ["INTERCHROMOSOMAL[chr14--chr12]"] |
| IGH@-ext--AC104136.1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | IGH@-ext^IGH.g@-ext | chr14:105746320:- | AC104136.1^ENSG00000251492.1 | chr4:136004547:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:3:1133:16064:4671 | . | NO_LDAS | 0.1457 | AG | 1.3383 | AC | 1.2310 | ["INTERCHROMOSOMAL[chr14--chr4]"] |
| HOXA10--GLDN | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | HOXA10^ENSG00000253293.5 | chr7:27179646:- | GLDN^ENSG00000186417.14 | chr15:51394835:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:1471:16055:21808 | . | YES_LDAS | 0.1457 | GT | 1.9086 | AG | 1.9219 | ["INTERCHROMOSOMAL[chr7--chr15]"] |
| HNRNPA3--NPIPB5 | 1 | 0 | 0.11 | 0.00 | INCL_NON_REF_SPLICE | HNRNPA3^ENSG00000170144.21 | chr2:177222133:+ | NPIPB5^ENSG00000243716.10 | chr16:22484662:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:2:1485:15554:13513 | . | YES_LDAS | 0.016 | GT | 1.8323 | AG | 1.5219 | ["INTERCHROMOSOMAL[chr2--chr16]"] |
| HNRNPA0--SP3 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | HNRNPA0^ENSG00000177733.7 | chr5:137754301:- | SP3^ENSG00000172845.17 | chr2:173963874:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:1415:27446:3032 | . | NO_LDAS | 0.1457 | GT | 1.7465 | AG | 1.6729 | ["INTERCHROMOSOMAL[chr5--chr2]"] |
| HLA-C--NUMA1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | HLA-C^ENSG00000204525.17 | chr6:31269493:- | NUMA1^ENSG00000137497.18 | chr11:72013673:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:3:2409:14874:8132 | . | NO_LDAS | 0.1457 | GT | 1.8256 | AG | 1.7819 | ["INTERCHROMOSOMAL[chr6--chr11]"] |
| HELLPAR--AEBP1 | 1 | 0 | 0.25 | 0.00 | INCL_NON_REF_SPLICE | HELLPAR^ENSG00000281344.1 | chr12:102361782:+ | AEBP1^ENSG00000106624.11 | chr7:44107871:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:1309:12472:19384 | . | NO_LDAS | 0.0364 | GC | 1.2310 | AG | 1.7968 | ["INTERCHROMOSOMAL[chr12--chr7]"] |
| GTF2E2--ZNF839 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | GTF2E2^ENSG00000197265.9 | chr8:30658137:- | ZNF839^ENSG00000022976.16 | chr14:102319922:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:2:2124:34460:9688 | . | NO_LDAS | 0.1457 | GT | 1.2419 | AG | 0.9183 | ["INTERCHROMOSOMAL[chr8--chr14]"] |
| GTF2A1--ARX | 1 | 0 | 0.08 | 0.00 | INCL_NON_REF_SPLICE | GTF2A1^ENSG00000165417.12 | chr14:81220934:- | ARX^ENSG00000004848.8 | chrX:25013700:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:2:2342:37437:24120 | . | NO_LDAS | 0.0117 | GT | 0.9183 | AG | 1.4716 | ["INTERCHROMOSOMAL[chr14--chrX]"] |
| GRIPAP1--SMARCAD1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | GRIPAP1^ENSG00000068400.13 | chrX:48989835:- | SMARCAD1^ENSG00000163104.18 | chr4:94208436:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:1257:30181:13541 | . | NO_LDAS | 0.1457 | GT | 1.9329 | AG | 1.5058 | ["INTERCHROMOSOMAL[chrX--chr4]"] |
| GRIK1-AS1--ATRX | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | GRIK1-AS1^ENSG00000174680.10 | chr21:29760065:+ | ATRX^ENSG00000085224.23 | chrX:77656573:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:1364:6420:7754 | . | NO_LDAS | 0.1457 | GT | 1.6049 | AG | 1.5850 | ["INTERCHROMOSOMAL[chr21--chrX]"] |
| GRB2--OR10H1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | GRB2^ENSG00000177885.15 | chr17:75325903:- | OR10H1^ENSG00000186723.4 | chr19:15807479:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:4:2171:20012:14564 | . | NO_LDAS | 0.1457 | GT | 1.5628 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr17--chr19]"] |
| GPATCH8--MTRNR2L1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | GPATCH8^ENSG00000186566.13 | chr17:44435065:- | MTRNR2L1^ENSG00000256618.3 | chr17:22523878:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:2329:3063:24639 | . | NO_LDAS | 0.1457 | GT | 1.5546 | AG | 1.2419 | ["INTRACHROMOSOMAL[chr17:21.87Mb]"] |
| GNAL--ONECUT3 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | GNAL^ENSG00000141404.17 | chr18:11752150:+ | ONECUT3^ENSG00000205922.5 | chr19:1775447:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:4:2118:42639:20015 | . | NO_LDAS | 0.1457 | GT | 1.2419 | AG | 0.9183 | ["INTERCHROMOSOMAL[chr18--chr19]"] |
| FAM25A--MTCO2P3 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | FAM25A^ENSG00000188100.9 | chr10:87022385:+ | MTCO2P3^ENSG00000230009.1 | chr13:57204365:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:2:1271:11266:11495 | . | NO_LDAS | 0.1457 | GC | 1.8323 | AG | 1.6402 | ["INTERCHROMOSOMAL[chr10--chr13]"] |
| FAM167B--PLEC | 1 | 0 | 0.25 | 0.00 | INCL_NON_REF_SPLICE | FAM167B^ENSG00000183615.6 | chr1:32248811:+ | PLEC^ENSG00000178209.16 | chr8:143924918:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:1227:15700:7039 | . | NO_LDAS | 0.0364 | GC | 0.8366 | AG | 1.2310 | ["INTERCHROMOSOMAL[chr1--chr8]"] |
| FAM117B--NOTCH2 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | FAM117B^ENSG00000138439.12 | chr2:202635434:+ | NOTCH2^ENSG00000134250.20 | chr1:120069445:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:2:2318:45592:23336 | . | NO_LDAS | 0.0728 | GT | 0.9183 | AG | 0.9183 | ["INTERCHROMOSOMAL[chr2--chr1]"] |
| FAM110B--C11orf80 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | FAM110B^ENSG00000169122.11 | chr8:58147371:+ | C11orf80^ENSG00000173715.18 | chr11:66744815:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:1139:20513:13499 | . | NO_LDAS | 0.0728 | GT | 1.4716 | AG | 1.0530 | ["INTERCHROMOSOMAL[chr8--chr11]"] |
| EVPL--WIPI1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | EVPL^ENSG00000167880.8 | chr17:76008813:- | WIPI1^ENSG00000070540.13 | chr17:68452921:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:1222:11970:5988 | . | NO_LDAS | 0.1457 | GT | 1.8892 | AG | 1.9329 | ["INTRACHROMOSOMAL[chr17:7.55Mb]"] |
| EVI5--PATJ | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | EVI5^ENSG00000067208.14 | chr1:92563642:- | PATJ^ENSG00000132849.21 | chr1:61990168:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:3:2331:35294:9982 | . | YES_LDAS | 0.1457 | GT | 1.9086 | AG | 1.2366 | ["INTRACHROMOSOMAL[chr1:30.33Mb]"] |
| ERN1--OTUD1 | 1 | 0 | 0.25 | 0.00 | INCL_NON_REF_SPLICE | ERN1^ENSG00000178607.17 | chr17:64075089:- | OTUD1^ENSG00000165312.7 | chr10:23440162:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:1163:30585:14886 | . | NO_LDAS | 0.0364 | GT | 1.3996 | AG | 1.2366 | ["INTERCHROMOSOMAL[chr17--chr10]"] |
| ERGIC3--CACNA1B | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | ERGIC3^ENSG00000125991.20 | chr20:35542223:+ | CACNA1B^ENSG00000148408.13 | chr9:138023597:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:4:2447:17148:10949 | . | NO_LDAS | 0.0728 | GT | 1.3753 | AG | 1.2310 | ["INTERCHROMOSOMAL[chr20--chr9]"] |
| ERCC1--ACAN | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | ERCC1^ENSG00000012061.16 | chr19:45421178:- | ACAN^ENSG00000157766.19 | chr15:88849598:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:3:1266:6477:29151 | . | NO_LDAS | 0.1457 | GT | 1.8323 | AG | 1.5546 | ["INTERCHROMOSOMAL[chr19--chr15]"] |
| EFCAB13--HNRNPAB | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | EFCAB13^ENSG00000178852.16 | chr17:47328814:+ | HNRNPAB^ENSG00000197451.12 | chr5:178205006:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:3:1240:30723:9884 | . | NO_LDAS | 0.1457 | GT | 1.6402 | AG | 1.8256 | ["INTERCHROMOSOMAL[chr17--chr5]"] |
| ECI1--MTNR1A | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | ECI1^ENSG00000167969.13 | chr16:2251695:- | MTNR1A^ENSG00000168412.6 | chr4:186555475:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:4:2273:47420:16666 | . | NO_LDAS | 0.1457 | GT | 1.4716 | AG | 1.4716 | ["INTERCHROMOSOMAL[chr16--chr4]"] |
| DYRK1A--CXADR | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | DYRK1A^ENSG00000157540.22 | chr21:37366185:+ | CXADR^ENSG00000154639.19 | chr21:17547027:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:2:2108:26176:8959 | . | YES_LDAS | 0.1457 | GT | 1.2867 | AG | 1.9656 | ["INTRACHROMOSOMAL[chr21:19.77Mb]"] |
| DSC3--TMPO-AS1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | DSC3^ENSG00000134762.17 | chr18:30991894:- | TMPO-AS1^ENSG00000257167.2 | chr12:98516166:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:2:1482:38416:13877 | . | NO_LDAS | 0.1457 | GC | 1.7465 | AG | 1.1589 | ["INTERCHROMOSOMAL[chr18--chr12]"] |
| DNHD1--TCEAL9 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | DNHD1^ENSG00000179532.13 | chr11:6557838:+ | TCEAL9^ENSG00000185222.10 | chrX:103357749:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:1452:43278:14956 | . | NO_LDAS | 0.1457 | GT | 1.7056 | AG | 1.8256 | ["INTERCHROMOSOMAL[chr11--chrX]"] |
| DNAJC5--ATP11A | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | DNAJC5^ENSG00000101152.11 | chr20:63895323:+ | ATP11A^ENSG00000068650.18 | chr13:112785135:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:3:2183:42364:11047 | . | YES_LDAS | 0.1457 | GT | 1.3383 | AG | 1.6895 | ["INTERCHROMOSOMAL[chr20--chr13]"] |
| DDHD1--MT-ND5 | 1 | 0 | 0.33 | 0.00 | INCL_NON_REF_SPLICE | DDHD1^ENSG00000100523.16 | chr14:53039302:- | MT-ND5^ENSG00000198786.2 | chrM:12998:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:3:1436:17350:9618 | . | NO_LDAS | 0.0481 | GT | 1.8892 | AG | 1.7819 | ["INTERCHROMOSOMAL[chr14--chrM]"] |
| DAZAP1--KLF16 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | DAZAP1^ENSG00000071626.17 | chr19:1407802:+ | KLF16^ENSG00000129911.9 | chr19:1854760:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:1253:51360:2499 | . | YES_LDAS | 0.1457 | GT | 1.7819 | AG | 1.9329 | ["INTRACHROMOSOMAL[chr19:0.42Mb]"] |
| DACT2--FOXL1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | DACT2^ENSG00000164488.12 | chr6:168319548:- | FOXL1^ENSG00000176678.6 | chr16:86579231:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:3:1371:20497:29529 | . | NO_LDAS | 0.1457 | GC | 1.4566 | AG | 1.3383 | ["INTERCHROMOSOMAL[chr6--chr16]"] |
| CREB5--SSH1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | CREB5^ENSG00000146592.17 | chr7:28488219:+ | SSH1^ENSG00000084112.15 | chr12:108787839:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:3:1397:9260:10458 | . | NO_LDAS | 0.1457 | GT | 1.9219 | AG | 1.5329 | ["INTERCHROMOSOMAL[chr7--chr12]"] |
| COL7A1--FHIT | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | COL7A1^ENSG00000114270.18 | chr3:48576992:- | FHIT^ENSG00000189283.10 | chr3:61042065:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:2:2221:20942:21528 | . | NO_LDAS | 0.1457 | GT | 1.2729 | AG | 0.9710 | ["INTRACHROMOSOMAL[chr3:11.15Mb]"] |
| COL6A1--BNIP3 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | COL6A1^ENSG00000142156.15 | chr21:45989656:+ | BNIP3^ENSG00000176171.11 | chr10:131966918:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:3:1153:16864:21332 | . | NO_LDAS | 0.0728 | GT | 1.7056 | AG | 1.8256 | ["INTERCHROMOSOMAL[chr21--chr10]"] |
| COL6A1--ASGR1 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | COL6A1^ENSG00000142156.15 | chr21:45989656:+ | ASGR1^ENSG00000141505.12 | chr17:7178025:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:3:1153:16864:21332 | . | NO_LDAS | 0.0728 | GT | 1.7056 | AG | 1.9086 | ["INTERCHROMOSOMAL[chr21--chr17]"] |
| COL27A1--COL3A1 | 1 | 0 | 0.50 | 0.00 | ONLY_REF_SPLICE | COL27A1^ENSG00000196739.15 | chr9:114231866:+ | COL3A1^ENSG00000168542.16 | chr2:188999842:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:4:1329:39468:23910 | . | NO_LDAS | 0.0728 | GT | 1.7819 | AG | 1.8295 | ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr9--chr2]"] |
| COL24A1--COL3A1 | 1 | 0 | 0.50 | 0.00 | ONLY_REF_SPLICE | COL24A1^ENSG00000171502.15 | chr1:86022833:- | COL3A1^ENSG00000168542.16 | chr2:188999842:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:4:1329:39468:23910 | . | NO_LDAS | 0.0728 | GT | 1.7465 | AG | 1.8295 | ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr1--chr2]"] |
| CNGB1--ANP32E | 1 | 0 | 0.33 | 0.00 | INCL_NON_REF_SPLICE | CNGB1^ENSG00000070729.14 | chr16:57949361:- | ANP32E^ENSG00000143401.15 | chr1:150226772:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:4:2157:14179:7516 | . | YES_LDAS | 0.0481 | GT | 0.9710 | AG | 1.2310 | ["INTERCHROMOSOMAL[chr16--chr1]"] |
| CNGA3--LONRF1 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | CNGA3^ENSG00000144191.12 | chr2:98396286:+ | LONRF1^ENSG00000154359.13 | chr8:12754255:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:2:1101:5142:13219 | . | NO_LDAS | 0.0728 | GT | 1.2419 | AG | 1.8062 | ["INTERCHROMOSOMAL[chr2--chr8]"] |
| CIC--MIATNB | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | CIC^ENSG00000079432.8 | chr19:42293281:+ | MIATNB^ENSG00000244625.7 | chr22:26780039:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:3:2405:31960:9562 | . | NO_LDAS | 0.1457 | GT | 1.9086 | AG | 1.8323 | ["INTERCHROMOSOMAL[chr19--chr22]"] |
| CIC--AL669831.3 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | CIC^ENSG00000079432.8 | chr19:42291393:+ | AL669831.3^ENSG00000230021.10 | chr1:724598:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:1266:14543:18459 | . | YES_LDAS | 0.0728 | GT | 1.7056 | AG | 1.6402 | ["INTERCHROMOSOMAL[chr19--chr1]"] |
| CFL1P2--LRP5 | 1 | 0 | 0.25 | 0.00 | INCL_NON_REF_SPLICE | CFL1P2^ENSG00000213478.2 | chr1:51158365:- | LRP5^ENSG00000162337.12 | chr11:68413922:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:1395:4584:20883 | . | NO_LDAS | 0.0364 | GT | 1.7465 | AG | 1.7465 | ["INTERCHROMOSOMAL[chr1--chr11]"] |
| CCDC32--MTRNR2L6 | 1 | 0 | 0.20 | 0.00 | INCL_NON_REF_SPLICE | CCDC32^ENSG00000128891.16 | chr15:40556971:- | MTRNR2L6^ENSG00000270672.1 | chr7:142667047:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:3:2340:42801:28086 | . | NO_LDAS | 0.0291 | GT | 1.8295 | AG | 1.2419 | ["INTERCHROMOSOMAL[chr15--chr7]"] |
| CCDC32--AC114801.3 | 1 | 0 | 0.20 | 0.00 | INCL_NON_REF_SPLICE | CCDC32^ENSG00000128891.16 | chr15:40556971:- | AC114801.3^ENSG00000249072.1 | chr4:78008537:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:3:2340:42801:28086 | . | NO_LDAS | 0.0291 | GT | 1.8295 | AG | 1.2419 | ["INTERCHROMOSOMAL[chr15--chr4]"] |
| CARD10--MTRNR2L7 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | CARD10^ENSG00000100065.15 | chr22:37508527:- | MTRNR2L7^ENSG00000256892.2 | chr10:37602889:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:1303:17657:4713 | . | NO_LDAS | 0.1457 | GT | 1.7819 | AG | 1.6895 | ["INTERCHROMOSOMAL[chr22--chr10]"] |
| C4orf19--B3GNTL1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | C4orf19^ENSG00000154274.15 | chr4:37454028:+ | B3GNTL1^ENSG00000175711.8 | chr17:82960393:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:2:2315:25594:23980 | . | NO_LDAS | 0.1457 | GT | 0.9183 | AG | 1.5628 | ["INTERCHROMOSOMAL[chr4--chr17]"] |
| C1orf35--WAC | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | C1orf35^ENSG00000143793.13 | chr1:228102037:- | WAC^ENSG00000095787.24 | chr10:28533220:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:3:2287:31030:1140 | . | NO_LDAS | 0.1457 | GT | 1.1589 | AG | 0.8366 | ["INTERCHROMOSOMAL[chr1--chr10]"] |
| C1S--SRRM2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | C1S^ENSG00000182326.15 | chr12:7067813:+ | SRRM2^ENSG00000167978.17 | chr16:2758988:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:3:1154:12601:9547 | . | YES_LDAS | 0.1457 | GT | 1.2867 | AG | 1.9329 | ["INTERCHROMOSOMAL[chr12--chr16]"] |
| C10orf71--MICALL1 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | C10orf71^ENSG00000177354.12 | chr10:49325741:+ | MICALL1^ENSG00000100139.14 | chr22:37925872:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:1270:19777:13765 | . | NO_LDAS | 0.0728 | GT | 1.5219 | AG | 1.2867 | ["INTERCHROMOSOMAL[chr10--chr22]"] |
| BPTF--XIST | 1 | 0 | 0.33 | 0.00 | INCL_NON_REF_SPLICE | BPTF^ENSG00000171634.18 | chr17:67945620:+ | XIST^ENSG00000229807.12 | chrX:73849869:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:3:1242:20189:9379 | . | NO_LDAS | 0.0481 | GT | 1.5628 | AG | 1.5546 | ["INTERCHROMOSOMAL[chr17--chrX]"] |
| BPTF--ERVH48-1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | BPTF^ENSG00000171634.18 | chr17:67854647:+ | ERVH48-1^ENSG00000233056.3 | chr21:42917817:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:4:1170:49386:28002 | . | NO_LDAS | 0.1457 | GT | 1.9329 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr17--chr21]"] |
| BPTF--DCXR | 1 | 0 | 0.33 | 0.00 | INCL_NON_REF_SPLICE | BPTF^ENSG00000171634.18 | chr17:67945620:+ | DCXR^ENSG00000169738.8 | chr17:82037080:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:3:1242:20189:9379 | . | NO_LDAS | 0.0481 | GT | 1.5628 | AG | 1.6049 | ["INTRACHROMOSOMAL[chr17:14.05Mb]"] |
| BPTF--BSND | 1 | 0 | 0.33 | 0.00 | INCL_NON_REF_SPLICE | BPTF^ENSG00000171634.18 | chr17:67945620:+ | BSND^ENSG00000162399.9 | chr1:55006997:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:3:1242:20189:9379 | . | NO_LDAS | 0.0481 | GT | 1.5628 | AG | 1.4256 | ["INTERCHROMOSOMAL[chr17--chr1]"] |
| AUTS2--KCTD12 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | AUTS2^ENSG00000158321.18 | chr7:69598407:+ | KCTD12^ENSG00000178695.6 | chr13:76886307:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:3:2110:27584:25017 | . | NO_LDAS | 0.1457 | GT | 0.9183 | AG | 1.4256 | ["INTERCHROMOSOMAL[chr7--chr13]"] |
| ARHGEF12--LONRF1 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | ARHGEF12^ENSG00000196914.9 | chr11:120336912:+ | LONRF1^ENSG00000154359.13 | chr8:12754253:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:2:1451:41668:24106 | . | NO_LDAS | 0.0728 | GT | 1.4295 | AG | 1.7819 | ["INTERCHROMOSOMAL[chr11--chr8]"] |
| AP003068.2--ATXN2L | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | AP003068.2^ENSG00000254614.2 | chr11:65180732:- | ATXN2L^ENSG00000168488.18 | chr16:28835058:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:1224:36402:25017 | . | NO_LDAS | 0.1457 | GT | 1.5628 | AG | 1.5301 | ["INTERCHROMOSOMAL[chr11--chr16]"] |
| ANK3--ARHGAP32 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | ANK3^ENSG00000151150.22 | chr10:60733263:- | ARHGAP32^ENSG00000134909.18 | chr11:129164427:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:2324:15554:8469 | . | YES_LDAS | 0.1457 | GT | 1.6729 | AG | 1.9656 | ["INTERCHROMOSOMAL[chr10--chr11]"] |
| AL033504.1--MALAT1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | AL033504.1^ENSG00000227681.5 | chr6:147953838:+ | MALAT1^ENSG00000251562.8 | chr11:65504549:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:2:2302:32753:3256 | . | NO_LDAS | 0.1457 | GT | 1.9219 | AG | 1.6402 | ["INTERCHROMOSOMAL[chr6--chr11]"] |
| AEBP2--MYH9 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | AEBP2^ENSG00000139154.16 | chr12:19439662:+ | MYH9^ENSG00000100345.22 | chr22:36300920:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:1435:30529:13331 | . | NO_LDAS | 0.1457 | GT | 1.2419 | AG | 1.1589 | ["INTERCHROMOSOMAL[chr12--chr22]"] |
| ADK--WDR11 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | ADK^ENSG00000156110.15 | chr10:74398579:+ | WDR11^ENSG00000120008.16 | chr10:120900029:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:2:1426:30359:20547 | . | YES_LDAS | 0.1457 | GT | 1.7465 | AG | 1.8062 | ["INTRACHROMOSOMAL[chr10:46.14Mb]"] |
| ADAM17--SNX1 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | ADAM17^ENSG00000151694.14 | chr2:9555509:- | SNX1^ENSG00000028528.15 | chr15:64112573:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:3:1216:14179:13597 | . | NO_LDAS | 0.1457 | GT | 1.7465 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr2--chr15]"] |
| AC253572.1--DST | 1 | 0 | 0.09 | 0.00 | INCL_NON_REF_SPLICE | AC253572.1^ENSG00000287979.1 | chr1:120850836:- | DST^ENSG00000151914.21 | chr6:56620492:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:1171:30197:24583 | . | YES_LDAS | 0.0131 | GT | 1.7232 | AG | 1.9329 | ["INTERCHROMOSOMAL[chr1--chr6]"] |
| AC135050.1--ARHGEF4 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | AC135050.1^ENSG00000232748.3 | chr16:31061313:+ | ARHGEF4^ENSG00000136002.20 | chr2:130916130:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:1:1407:2238:12140 | . | NO_LDAS | 0.0728 | GT | 1.5329 | AG | 1.5301 | ["INTERCHROMOSOMAL[chr16--chr2]"] |
| AC129492.1--UGP2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | AC129492.1^ENSG00000214999.3 | chr17:8081167:+ | UGP2^ENSG00000169764.16 | chr2:63841123:+ | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:2:1220:38481:5946 | . | NO_LDAS | 0.1457 | GT | 1.3383 | AG | 0.9968 | ["INTERCHROMOSOMAL[chr17--chr2]"] |
| ABCD3--CABLES2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | ABCD3^ENSG00000117528.14 | chr1:94418444:+ | CABLES2^ENSG00000149679.11 | chr20:62407029:- | &SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:4:2422:46878:18866 | . | NO_LDAS | 0.1457 | GT | 0.9183 | AG | 0.9710 | ["INTERCHROMOSOMAL[chr1--chr20]"] |
186 rows