File Info
- Filename
- ColoN_FFPE_L02_RNA_01_B23LG7FLT4_1.attempt1.command.log
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0011/B23LG7FLT4/nfcore_rnafusion__2cae617--20260515-145204/QC/preseq/log/ColoN_FFPE_L02_RNA_01_B23LG7FLT4_1.attempt1.command.log
- Size
- 5.5 KB
- Workflow Run
- dev_rna_exp0011-2cae617
- Published
- May 16, 2026 1:54 AM
Content
View in new tabPAIRED_END_BAM_INPUT Processed 1000000 records Processed 2000000 records Processed 3000000 records Processed 4000000 records Processed 5000000 records Processed 6000000 records Processed 7000000 records Processed 8000000 records Processed 9000000 records Processed 10000000 records Processed 11000000 records Processed 12000000 records Processed 13000000 records Processed 14000000 records Processed 15000000 records Processed 16000000 records Processed 17000000 records Processed 18000000 records Processed 19000000 records Processed 20000000 records Processed 21000000 records Processed 22000000 records Processed 23000000 records Processed 24000000 records Processed 25000000 records Processed 26000000 records Processed 27000000 records Processed 28000000 records Processed 29000000 records Processed 30000000 records Processed 31000000 records Processed 32000000 records Processed 33000000 records Processed 34000000 records Processed 35000000 records Processed 36000000 records Processed 37000000 records Processed 38000000 records Processed 39000000 records Processed 40000000 records Processed 41000000 records Processed 42000000 records Processed 43000000 records Processed 44000000 records Processed 45000000 records Processed 46000000 records Processed 47000000 records Processed 48000000 records Processed 49000000 records Processed 50000000 records Processed 51000000 records Processed 52000000 records Processed 53000000 records Processed 54000000 records Processed 55000000 records Processed 56000000 records Processed 57000000 records Processed 58000000 records Processed 59000000 records Processed 60000000 records paired = 30029818 unpaired = 769249 MERGED PAIRED END READS = 30029818 MATES PROCESSED = 60828885 TOTAL READS = 30799067 DISTINCT READS = 3.3732e+06 DISTINCT COUNTS = 512 MAX COUNT = 102528 COUNTS OF 1 = 1.45135e+06 MAX TERMS = 100 OBSERVED COUNTS (102529) 1 1451349 2 491212 3 189205 4 96166 5 67424 6 57364 7 52670 8 48933 9 46876 10 44556 11 42524 12 40660 13 38791 14 36746 15 35048 16 33350 17 31534 18 30109 19 28664 20 27451 21 25857 22 24737 23 23176 24 22149 25 20984 26 19408 27 18613 28 17827 29 16640 30 15433 31 14848 32 13994 33 13183 34 12373 35 11820 36 11241 37 10374 38 9703 39 9078 40 8696 41 8169 42 7747 43 7408 44 6810 45 6603 46 5998 47 5709 48 5423 49 5005 50 4782 51 4492 52 4305 53 4120 54 3794 55 3580 56 3436 57 3162 58 3073 59 2898 60 2677 61 2609 62 2489 63 2433 64 2314 65 2081 66 2021 67 2027 68 1842 69 1759 70 1643 71 1590 72 1568 73 1461 74 1330 75 1276 76 1233 77 1198 78 1168 79 1113 80 1058 81 1009 82 977 83 923 84 901 85 820 86 786 87 763 88 713 89 690 90 682 91 645 92 636 93 580 94 572 95 532 96 505 97 514 98 479 99 453 100 456 101 448 102 414 103 393 104 391 105 405 106 375 107 381 108 360 109 353 110 308 111 305 112 305 113 300 114 256 115 276 116 279 117 259 118 265 119 216 120 233 121 202 122 222 123 199 124 209 125 189 126 198 127 197 128 192 129 160 130 157 131 187 132 176 133 172 134 147 135 137 136 136 137 154 138 147 139 112 140 137 141 136 142 133 143 144 144 121 145 99 146 115 147 98 148 115 149 100 150 106 151 99 152 100 153 86 154 82 155 99 156 96 157 75 158 86 159 81 160 87 161 83 162 59 163 71 164 65 165 85 166 68 167 76 168 77 169 69 170 54 171 51 172 61 173 54 174 46 175 67 176 80 177 44 178 49 179 53 180 54 181 53 182 38 183 55 184 42 185 45 186 44 187 38 188 41 189 39 190 39 191 41 192 29 193 28 194 32 195 34 196 33 197 31 198 38 199 29 200 17 201 28 202 23 203 31 204 17 205 29 206 34 207 24 208 17 209 27 210 20 211 19 212 13 213 22 214 24 215 16 216 19 217 11 218 20 219 15 220 19 221 18 222 23 223 14 224 13 225 18 226 11 227 18 228 14 229 14 230 10 231 11 232 13 233 16 234 12 235 7 236 7 237 9 238 9 239 6 240 5 241 10 242 9 243 10 244 13 245 9 246 6 247 6 248 16 249 11 250 9 251 4 252 9 253 7 254 9 255 6 256 11 257 6 258 5 259 6 260 5 261 6 262 4 263 5 264 6 265 5 266 3 267 4 268 4 269 2 270 7 271 9 272 4 273 4 274 3 275 7 276 2 277 8 278 3 279 6 280 6 281 6 282 4 283 5 284 8 285 5 286 3 287 4 288 4 289 3 290 5 291 3 292 2 293 3 294 1 295 3 296 2 297 4 298 2 299 2 300 6 301 2 302 3 303 3 304 1 305 2 306 2 307 2 308 6 309 3 310 5 311 3 313 4 314 3 315 1 316 2 317 2 318 4 319 4 320 1 321 2 322 3 323 1 324 3 325 5 326 4 327 1 328 3 329 2 330 6 331 5 333 2 334 3 335 1 336 1 337 2 338 1 340 1 341 3 342 3 343 3 344 2 345 1 346 3 347 2 348 4 349 5 350 2 351 2 352 2 353 1 354 1 356 2 357 2 358 2 360 2 361 2 362 1 363 1 364 1 365 7 366 4 368 3 369 2 371 1 372 2 375 3 376 2 378 1 380 3 381 2 382 1 384 4 385 2 386 1 387 4 391 2 392 1 393 1 394 1 395 1 397 3 398 1 399 1 400 4 401 1 402 2 405 1 406 3 407 3 408 1 409 1 411 2 412 3 415 2 418 1 420 1 421 1 422 1 426 2 428 1 429 1 430 1 432 1 434 1 436 1 438 1 441 2 444 1 445 1 446 1 452 1 453 2 455 1 457 1 458 1 459 1 461 2 462 2 468 1 471 1 474 1 477 1 479 1 481 1 484 2 485 1 486 1 491 1 493 1 495 1 499 1 500 1 502 1 512 1 520 1 521 2 524 1 527 1 528 1 531 1 532 1 536 1 546 2 547 1 549 1 550 1 551 1 558 2 559 1 560 1 566 1 570 1 572 2 577 1 580 1 582 1 586 2 591 1 595 1 596 2 600 1 604 2 615 1 621 1 632 1 635 1 639 1 650 1 662 1 663 1 680 1 687 1 688 1 690 1 698 1 709 1 710 2 734 2 737 1 746 1 749 1 752 1 758 1 782 1 786 1 812 1 834 1 852 1 860 1 894 1 915 1 936 1 1012 1 1044 1 1064 1 1068 1 1195 2 1241 1 1410 1 1498 1 1544 1 1600 1 1802 1 1869 1 2041 1 2635 1 2849 1 2860 1 3161 1 3482 1 4747 1 102528 1 [ESTIMATING YIELD CURVE] [BOOTSTRAPPING HISTOGRAM] ..............._..........._................_....................._..... ..........._.................._... [COMPUTING CONFIDENCE INTERVALS] [WRITING OUTPUT]