File Info

Filename
ColoN_FFPE_L02_RNA_01_B23LG7FLT4_1.attempt1.command.log
Full Path
s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0011/B23LG7FLT4/nfcore_rnafusion__2cae617--20260515-145204/QC/preseq/log/ColoN_FFPE_L02_RNA_01_B23LG7FLT4_1.attempt1.command.log
Size
5.5 KB
Published
May 16, 2026 1:54 AM
PAIRED_END_BAM_INPUT
Processed 1000000 records
Processed 2000000 records
Processed 3000000 records
Processed 4000000 records
Processed 5000000 records
Processed 6000000 records
Processed 7000000 records
Processed 8000000 records
Processed 9000000 records
Processed 10000000 records
Processed 11000000 records
Processed 12000000 records
Processed 13000000 records
Processed 14000000 records
Processed 15000000 records
Processed 16000000 records
Processed 17000000 records
Processed 18000000 records
Processed 19000000 records
Processed 20000000 records
Processed 21000000 records
Processed 22000000 records
Processed 23000000 records
Processed 24000000 records
Processed 25000000 records
Processed 26000000 records
Processed 27000000 records
Processed 28000000 records
Processed 29000000 records
Processed 30000000 records
Processed 31000000 records
Processed 32000000 records
Processed 33000000 records
Processed 34000000 records
Processed 35000000 records
Processed 36000000 records
Processed 37000000 records
Processed 38000000 records
Processed 39000000 records
Processed 40000000 records
Processed 41000000 records
Processed 42000000 records
Processed 43000000 records
Processed 44000000 records
Processed 45000000 records
Processed 46000000 records
Processed 47000000 records
Processed 48000000 records
Processed 49000000 records
Processed 50000000 records
Processed 51000000 records
Processed 52000000 records
Processed 53000000 records
Processed 54000000 records
Processed 55000000 records
Processed 56000000 records
Processed 57000000 records
Processed 58000000 records
Processed 59000000 records
Processed 60000000 records
paired = 30029818
unpaired = 769249
MERGED PAIRED END READS = 30029818
MATES PROCESSED = 60828885
TOTAL READS     = 30799067
DISTINCT READS  = 3.3732e+06
DISTINCT COUNTS = 512
MAX COUNT       = 102528
COUNTS OF 1     = 1.45135e+06
MAX TERMS       = 100
OBSERVED COUNTS (102529)
1	1451349
2	491212
3	189205
4	96166
5	67424
6	57364
7	52670
8	48933
9	46876
10	44556
11	42524
12	40660
13	38791
14	36746
15	35048
16	33350
17	31534
18	30109
19	28664
20	27451
21	25857
22	24737
23	23176
24	22149
25	20984
26	19408
27	18613
28	17827
29	16640
30	15433
31	14848
32	13994
33	13183
34	12373
35	11820
36	11241
37	10374
38	9703
39	9078
40	8696
41	8169
42	7747
43	7408
44	6810
45	6603
46	5998
47	5709
48	5423
49	5005
50	4782
51	4492
52	4305
53	4120
54	3794
55	3580
56	3436
57	3162
58	3073
59	2898
60	2677
61	2609
62	2489
63	2433
64	2314
65	2081
66	2021
67	2027
68	1842
69	1759
70	1643
71	1590
72	1568
73	1461
74	1330
75	1276
76	1233
77	1198
78	1168
79	1113
80	1058
81	1009
82	977
83	923
84	901
85	820
86	786
87	763
88	713
89	690
90	682
91	645
92	636
93	580
94	572
95	532
96	505
97	514
98	479
99	453
100	456
101	448
102	414
103	393
104	391
105	405
106	375
107	381
108	360
109	353
110	308
111	305
112	305
113	300
114	256
115	276
116	279
117	259
118	265
119	216
120	233
121	202
122	222
123	199
124	209
125	189
126	198
127	197
128	192
129	160
130	157
131	187
132	176
133	172
134	147
135	137
136	136
137	154
138	147
139	112
140	137
141	136
142	133
143	144
144	121
145	99
146	115
147	98
148	115
149	100
150	106
151	99
152	100
153	86
154	82
155	99
156	96
157	75
158	86
159	81
160	87
161	83
162	59
163	71
164	65
165	85
166	68
167	76
168	77
169	69
170	54
171	51
172	61
173	54
174	46
175	67
176	80
177	44
178	49
179	53
180	54
181	53
182	38
183	55
184	42
185	45
186	44
187	38
188	41
189	39
190	39
191	41
192	29
193	28
194	32
195	34
196	33
197	31
198	38
199	29
200	17
201	28
202	23
203	31
204	17
205	29
206	34
207	24
208	17
209	27
210	20
211	19
212	13
213	22
214	24
215	16
216	19
217	11
218	20
219	15
220	19
221	18
222	23
223	14
224	13
225	18
226	11
227	18
228	14
229	14
230	10
231	11
232	13
233	16
234	12
235	7
236	7
237	9
238	9
239	6
240	5
241	10
242	9
243	10
244	13
245	9
246	6
247	6
248	16
249	11
250	9
251	4
252	9
253	7
254	9
255	6
256	11
257	6
258	5
259	6
260	5
261	6
262	4
263	5
264	6
265	5
266	3
267	4
268	4
269	2
270	7
271	9
272	4
273	4
274	3
275	7
276	2
277	8
278	3
279	6
280	6
281	6
282	4
283	5
284	8
285	5
286	3
287	4
288	4
289	3
290	5
291	3
292	2
293	3
294	1
295	3
296	2
297	4
298	2
299	2
300	6
301	2
302	3
303	3
304	1
305	2
306	2
307	2
308	6
309	3
310	5
311	3
313	4
314	3
315	1
316	2
317	2
318	4
319	4
320	1
321	2
322	3
323	1
324	3
325	5
326	4
327	1
328	3
329	2
330	6
331	5
333	2
334	3
335	1
336	1
337	2
338	1
340	1
341	3
342	3
343	3
344	2
345	1
346	3
347	2
348	4
349	5
350	2
351	2
352	2
353	1
354	1
356	2
357	2
358	2
360	2
361	2
362	1
363	1
364	1
365	7
366	4
368	3
369	2
371	1
372	2
375	3
376	2
378	1
380	3
381	2
382	1
384	4
385	2
386	1
387	4
391	2
392	1
393	1
394	1
395	1
397	3
398	1
399	1
400	4
401	1
402	2
405	1
406	3
407	3
408	1
409	1
411	2
412	3
415	2
418	1
420	1
421	1
422	1
426	2
428	1
429	1
430	1
432	1
434	1
436	1
438	1
441	2
444	1
445	1
446	1
452	1
453	2
455	1
457	1
458	1
459	1
461	2
462	2
468	1
471	1
474	1
477	1
479	1
481	1
484	2
485	1
486	1
491	1
493	1
495	1
499	1
500	1
502	1
512	1
520	1
521	2
524	1
527	1
528	1
531	1
532	1
536	1
546	2
547	1
549	1
550	1
551	1
558	2
559	1
560	1
566	1
570	1
572	2
577	1
580	1
582	1
586	2
591	1
595	1
596	2
600	1
604	2
615	1
621	1
632	1
635	1
639	1
650	1
662	1
663	1
680	1
687	1
688	1
690	1
698	1
709	1
710	2
734	2
737	1
746	1
749	1
752	1
758	1
782	1
786	1
812	1
834	1
852	1
860	1
894	1
915	1
936	1
1012	1
1044	1
1064	1
1068	1
1195	2
1241	1
1410	1
1498	1
1544	1
1600	1
1802	1
1869	1
2041	1
2635	1
2849	1
2860	1
3161	1
3482	1
4747	1
102528	1

[ESTIMATING YIELD CURVE]
[BOOTSTRAPPING HISTOGRAM]
..............._..........._................_....................._.....
..........._.................._...
[COMPUTING CONFIDENCE INTERVALS]
[WRITING OUTPUT]