File Info
- Filename
- BreastNP_FFPE_L03_RNA_01_B23LG7FLT4_1.arriba.fusions.tsv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0011/B23LG7FLT4/nfcore_rnafusion__2cae617--20260515-145204/arriba/BreastNP_FFPE_L03_RNA_01_B23LG7FLT4_1.arriba.fusions.tsv
- Size
- 2.4 KB
- Workflow Run
- dev_rna_exp0011-2cae617
- Published
- May 16, 2026 1:54 AM
Content
View in new tab| #gene1 | gene2 | strand1(gene/fusion) | strand2(gene/fusion) | breakpoint1 | breakpoint2 | site1 | site2 | type | split_reads1 | split_reads2 | discordant_mates | coverage1 | coverage2 | confidence | reading_frame | tags | retained_protein_domains | closest_genomic_breakpoint1 | closest_genomic_breakpoint2 | gene_id1 | gene_id2 | transcript_id1 | transcript_id2 | direction1 | direction2 | filters | fusion_transcript | peptide_sequence | read_identifiers |
| RBM33 | RBM33 | +/+ | +/+ | chr7:155740026 | chr7:155711173 | CDS/splice-site | CDS/splice-site | duplication/non-canonical_splicing | 0 | 2 | 0 | 288 | 83 | low | out-of-frame | . | |RNA_recognition_motif._(a.k.a._RRM__RBD__or_RNP_domain)(100%) | . | . | ENSG00000184863 | ENSG00000184863 | ENST00000401878 | ENST00000440108 | downstream | upstream | duplicates(36) | GCAGTGCCCCCAGCGCCAGGGGCTCCGGCAT|ACTCATTCTCCAAGGTTAATTCCTCCACAGCCCCAGGCTCCCCCTCCACCGCCtCCGCCGCCTCAGCAGCAGCCGATCAGAAGCCTGT | QCPQRQGLRH|thsprlippqpqappppppppqqqpirsl | LH00166:238:23LG7FLT4:5:1198:40317:26671,LH00166:238:23LG7FLT4:5:1217:22447:19342,LH00166:238:23LG7FLT4:5:1268:49491:16946,LH00166:238:23LG7FLT4:5:1305:15651:25143,LH00166:238:23LG7FLT4:5:1326:10417:10584,LH00166:238:23LG7FLT4:5:1353:29299:8707,LH00166:238:23LG7FLT4:6:1201:38894:9884,LH00166:238:23LG7FLT4:6:1227:3387:14802,LH00166:238:23LG7FLT4:6:1231:40997:8679,LH00166:238:23LG7FLT4:6:1289:2731:22355,LH00166:238:23LG7FLT4:6:1466:23919:3312,LH00166:238:23LG7FLT4:6:1491:12205:14101,LH00166:238:23LG7FLT4:6:2156:9956:18726,LH00166:238:23LG7FLT4:6:2188:47178:5596,LH00166:238:23LG7FLT4:6:2192:50948:21234,LH00166:238:23LG7FLT4:6:2206:39597:17268,LH00166:238:23LG7FLT4:6:2346:17156:22088,LH00166:238:23LG7FLT4:6:2402:16784:25788,LH00166:238:23LG7FLT4:6:2409:38667:28800,LH00166:238:23LG7FLT4:6:2470:45891:3032,LH00166:238:23LG7FLT4:6:2479:7909:22074,LH00166:238:23LG7FLT4:6:2496:24906:28086,LH00166:238:23LG7FLT4:7:1379:48788:2920,LH00166:238:23LG7FLT4:7:2149:34355:28170,LH00166:238:23LG7FLT4:7:2240:7480:9814,LH00166:238:23LG7FLT4:7:2254:21557:9449,LH00166:238:23LG7FLT4:7:2424:33926:22299,LH00166:238:23LG7FLT4:7:2464:13184:17002,LH00166:238:23LG7FLT4:8:1184:12819:19090,LH00166:238:23LG7FLT4:8:1242:6703:13989,LH00166:238:23LG7FLT4:8:1243:35552:2555,LH00166:238:23LG7FLT4:8:1245:37915:26180,LH00166:238:23LG7FLT4:8:1246:2634:15236,LH00166:238:23LG7FLT4:8:1303:38732:5596,LH00166:238:23LG7FLT4:8:2172:28150:2177,LH00166:238:23LG7FLT4:8:2247:46118:6591,LH00166:238:23LG7FLT4:8:2283:15562:27287,LH00166:238:23LG7FLT4:8:2293:13475:15545 |
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