File Info
- Filename
- HeadNeckN_FFPE_L06_RNA_01_B23LG7FLT4_1.sample_scores.tsv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0011/B23LG7FLT4/nfcore_rnafusion__2cae617--20260515-145204/kallisto/HeadNeckN_FFPE_L06_RNA_01_B23LG7FLT4_1.sample_scores.tsv
- Size
- 3.1 KB
- Workflow Run
- dev_rna_exp0011-2cae617
- Published
- May 16, 2026 1:54 AM
Content
View in new tab| sample_id | category | signature | score_log2tpm1_mean | n_present | n_in_signature_targeted |
| HeadNeckN_FFPE_L06_RNA_01_B23LG7FLT4_1 | cancer | Angiogenesis_VEGF | 3.619 | 9 | 9 |
| HeadNeckN_FFPE_L06_RNA_01_B23LG7FLT4_1 | cancer | BMP_signaling | 3.902 | 13 | 13 |
| HeadNeckN_FFPE_L06_RNA_01_B23LG7FLT4_1 | cancer | Cell_cycle | 4.977 | 15 | 15 |
| HeadNeckN_FFPE_L06_RNA_01_B23LG7FLT4_1 | cancer | Hedgehog_signaling | 3.27 | 10 | 10 |
| HeadNeckN_FFPE_L06_RNA_01_B23LG7FLT4_1 | cancer | Hippo_signaling | 5.285 | 13 | 13 |
| HeadNeckN_FFPE_L06_RNA_01_B23LG7FLT4_1 | cancer | Homologous_recombination_repair | 4.221 | 33 | 33 |
| HeadNeckN_FFPE_L06_RNA_01_B23LG7FLT4_1 | cancer | Hormone_receptor_signaling | 3.968 | 8 | 8 |
| HeadNeckN_FFPE_L06_RNA_01_B23LG7FLT4_1 | cancer | JAK_STAT | 6.341 | 11 | 11 |
| HeadNeckN_FFPE_L06_RNA_01_B23LG7FLT4_1 | cancer | MSI_MMR | 4.41 | 23 | 23 |
| HeadNeckN_FFPE_L06_RNA_01_B23LG7FLT4_1 | cancer | MYC_signaling | 5.599 | 5 | 5 |
| HeadNeckN_FFPE_L06_RNA_01_B23LG7FLT4_1 | cancer | Metastasis_EMT | 5.072 | 39 | 39 |
| HeadNeckN_FFPE_L06_RNA_01_B23LG7FLT4_1 | cancer | NFkB_signaling | 6.28 | 10 | 10 |
| HeadNeckN_FFPE_L06_RNA_01_B23LG7FLT4_1 | cancer | NOTCH_signaling | 5.046 | 27 | 27 |
| HeadNeckN_FFPE_L06_RNA_01_B23LG7FLT4_1 | cancer | PI3K_AKT_mTOR | 6.073 | 18 | 18 |
| HeadNeckN_FFPE_L06_RNA_01_B23LG7FLT4_1 | cancer | RTK_MAPK_signaling | 5.061 | 32 | 32 |
| HeadNeckN_FFPE_L06_RNA_01_B23LG7FLT4_1 | cancer | TGFb_signaling | 4.769 | 13 | 13 |
| HeadNeckN_FFPE_L06_RNA_01_B23LG7FLT4_1 | cancer | WNT_signaling | 3.933 | 38 | 38 |
| HeadNeckN_FFPE_L06_RNA_01_B23LG7FLT4_1 | cancer | p53_pathway | 6.294 | 7 | 7 |
| HeadNeckN_FFPE_L06_RNA_01_B23LG7FLT4_1 | housekeeping | Housekeeping_core_minimal | 6.972 | 10 | 10 |
| HeadNeckN_FFPE_L06_RNA_01_B23LG7FLT4_1 | housekeeping | Housekeeping_normalization | 7.038 | 20 | 20 |
| HeadNeckN_FFPE_L06_RNA_01_B23LG7FLT4_1 | sex_chromosome | chry_signature | 0.088 | 5 | 5 |
| HeadNeckN_FFPE_L06_RNA_01_B23LG7FLT4_1 | tissue_origin | Bladder | 4.922 | 12 | 12 |
| HeadNeckN_FFPE_L06_RNA_01_B23LG7FLT4_1 | tissue_origin | Brain_Glioma | 2.497 | 9 | 9 |
| HeadNeckN_FFPE_L06_RNA_01_B23LG7FLT4_1 | tissue_origin | Breast | 5.262 | 13 | 13 |
| HeadNeckN_FFPE_L06_RNA_01_B23LG7FLT4_1 | tissue_origin | Breast_Basal_like_TNBC | 8.239 | 8 | 8 |
| HeadNeckN_FFPE_L06_RNA_01_B23LG7FLT4_1 | tissue_origin | Breast_HER2_enriched | 6.21 | 9 | 9 |
| HeadNeckN_FFPE_L06_RNA_01_B23LG7FLT4_1 | tissue_origin | Breast_Luminal_A | 6.196 | 10 | 10 |
| HeadNeckN_FFPE_L06_RNA_01_B23LG7FLT4_1 | tissue_origin | Breast_Luminal_B | 5.524 | 11 | 11 |
| HeadNeckN_FFPE_L06_RNA_01_B23LG7FLT4_1 | tissue_origin | Colorectal | 1.54 | 13 | 13 |
| HeadNeckN_FFPE_L06_RNA_01_B23LG7FLT4_1 | tissue_origin | Endometrial | 3.838 | 9 | 9 |
| HeadNeckN_FFPE_L06_RNA_01_B23LG7FLT4_1 | tissue_origin | Kidney_ClearCell | 2.738 | 8 | 8 |
| HeadNeckN_FFPE_L06_RNA_01_B23LG7FLT4_1 | tissue_origin | Liver | 1.101 | 10 | 10 |
| HeadNeckN_FFPE_L06_RNA_01_B23LG7FLT4_1 | tissue_origin | Lung_Adenocarcinoma | 2.027 | 9 | 9 |
| HeadNeckN_FFPE_L06_RNA_01_B23LG7FLT4_1 | tissue_origin | Lung_Squamous | 8.151 | 7 | 7 |
| HeadNeckN_FFPE_L06_RNA_01_B23LG7FLT4_1 | tissue_origin | Melanoma | 2.855 | 7 | 7 |
| HeadNeckN_FFPE_L06_RNA_01_B23LG7FLT4_1 | tissue_origin | Neuroendocrine | 2.413 | 8 | 8 |
| HeadNeckN_FFPE_L06_RNA_01_B23LG7FLT4_1 | tissue_origin | Ovary | 2.886 | 8 | 8 |
| HeadNeckN_FFPE_L06_RNA_01_B23LG7FLT4_1 | tissue_origin | Pancreas | 3.386 | 10 | 10 |
| HeadNeckN_FFPE_L06_RNA_01_B23LG7FLT4_1 | tissue_origin | Prostate | 2.315 | 7 | 7 |
| HeadNeckN_FFPE_L06_RNA_01_B23LG7FLT4_1 | tissue_origin | Upper_Urinary_Tract | 3.26 | 11 | 11 |
41 rows