File Info
- Filename
- BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2.sample_scores.tsv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0011/B23LG7FLT4/nfcore_rnafusion_100M__5f1fa793--20260303-130000/kallisto/BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2.sample_scores.tsv
- Size
- 3.0 KB
- Workflow Run
- dev_rna_exp0011_5f1fa793
- Published
- Mar 03, 2026 2:09 PM
Content
View in new tab| sample_id | category | signature | score_log2tpm1_mean | n_present | n_in_signature_targeted |
| BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2 | cancer | Angiogenesis_VEGF | 4.063 | 9 | 9 |
| BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2 | cancer | BMP_signaling | 4.756 | 13 | 13 |
| BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2 | cancer | Cell_cycle | 3.764 | 15 | 15 |
| BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2 | cancer | Hedgehog_signaling | 4.208 | 10 | 10 |
| BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2 | cancer | Hippo_signaling | 6.053 | 13 | 13 |
| BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2 | cancer | Homologous_recombination_repair | 3.29 | 33 | 33 |
| BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2 | cancer | Hormone_receptor_signaling | 3.625 | 8 | 8 |
| BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2 | cancer | JAK_STAT | 5.994 | 11 | 11 |
| BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2 | cancer | MSI_MMR | 4.017 | 23 | 23 |
| BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2 | cancer | MYC_signaling | 5.433 | 5 | 5 |
| BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2 | cancer | Metastasis_EMT | 5.63 | 39 | 39 |
| BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2 | cancer | NFkB_signaling | 6.227 | 10 | 10 |
| BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2 | cancer | NOTCH_signaling | 4.776 | 27 | 27 |
| BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2 | cancer | PI3K_AKT_mTOR | 6.176 | 18 | 18 |
| BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2 | cancer | RTK_MAPK_signaling | 5.249 | 32 | 32 |
| BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2 | cancer | TGFb_signaling | 5.132 | 13 | 13 |
| BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2 | cancer | WNT_signaling | 3.683 | 38 | 38 |
| BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2 | cancer | p53_pathway | 6.144 | 7 | 7 |
| BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2 | housekeeping | Housekeeping_core_minimal | 6.225 | 10 | 10 |
| BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2 | housekeeping | Housekeeping_normalization | 6.224 | 20 | 20 |
| BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2 | sex_chromosome | chry_signature | 0.0 | 5 | 5 |
| BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2 | tissue_origin | Bladder | 1.919 | 12 | 12 |
| BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2 | tissue_origin | Brain_Glioma | 3.13 | 9 | 9 |
| BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2 | tissue_origin | Breast | 5.185 | 13 | 13 |
| BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2 | tissue_origin | Breast_Basal_like_TNBC | 3.143 | 8 | 8 |
| BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2 | tissue_origin | Breast_HER2_enriched | 7.514 | 9 | 9 |
| BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2 | tissue_origin | Breast_Luminal_A | 6.266 | 10 | 10 |
| BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2 | tissue_origin | Breast_Luminal_B | 4.832 | 11 | 11 |
| BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2 | tissue_origin | Colorectal | 6.667 | 13 | 13 |
| BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2 | tissue_origin | Endometrial | 4.277 | 9 | 9 |
| BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2 | tissue_origin | Kidney_ClearCell | 2.738 | 8 | 8 |
| BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2 | tissue_origin | Liver | 2.704 | 10 | 10 |
| BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2 | tissue_origin | Lung_Adenocarcinoma | 2.219 | 9 | 9 |
| BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2 | tissue_origin | Lung_Squamous | 1.459 | 7 | 7 |
| BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2 | tissue_origin | Melanoma | 2.961 | 7 | 7 |
| BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2 | tissue_origin | Neuroendocrine | 4.399 | 8 | 8 |
| BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2 | tissue_origin | Ovary | 4.102 | 8 | 8 |
| BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2 | tissue_origin | Pancreas | 5.06 | 10 | 10 |
| BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2 | tissue_origin | Prostate | 3.261 | 7 | 7 |
| BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2 | tissue_origin | Upper_Urinary_Tract | 2.688 | 11 | 11 |
41 rows