File Info
- Filename
- LungN_FFPE_L01_RNA_01_B23LG7FLT4_1.arriba.fusions.filtered.tsv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0011/B23LG7FLT4/nfcore_rnafusion_100M__5f1fa793--20260303-130000/arriba/LungN_FFPE_L01_RNA_01_B23LG7FLT4_1.arriba.fusions.filtered.tsv
- Size
- 6.9 KB
- Workflow Run
- dev_rna_exp0011_5f1fa793
- Published
- Mar 03, 2026 4:56 PM
Content
View in new tab| #gene1 | gene2 | strand1(gene/fusion) | strand2(gene/fusion) | breakpoint1 | breakpoint2 | site1 | site2 | type | split_reads1 | split_reads2 | discordant_mates | coverage1 | coverage2 | confidence | reading_frame | tags | retained_protein_domains | closest_genomic_breakpoint1 | closest_genomic_breakpoint2 | gene_id1 | gene_id2 | transcript_id1 | transcript_id2 | direction1 | direction2 | filters | fusion_transcript | peptide_sequence | read_identifiers |
| MON1B | AC106733.1(65533),MON1B(20005) | +/+ | ./+ | 16:77191633 | 16:77170830 | CDS/splice-site | intergenic | duplication | 17 | 11 | 0 | 1312 | 15 | high | out-of-frame | . | First_Longin_domain_of_FUZ__MON1_and_HPS1(3%)| | . | . | ENSG00000103111 | . | ENST00000248248 | . | downstream | upstream | duplicates(13) | CCCGGGGGCGCGGAGGACTTGGAGGACACGCAGTTCCCCAGTGAGGAAGCTAGAGAAGGTGGAGGGGTTCACGCGGTCCCGCCGGATCCCGAAGACGAGGGCCTGGAGGAAACAG|GGATGCTGAGCTGCTGCAGGAAGCTCTTGAACATCAAGTTATGCCAGCAGAAAAAGACATCAGATTGGAAGAATGTGG | PGGAEDLEDTQFPSEEAREGGGVHAVPPDPEDEGLEET|gmlsccrkllniklcqqkktsdwknv | LH00166:238:23LG7FLT4:5:1139:8111:4041,LH00166:238:23LG7FLT4:5:1182:21241:24485,LH00166:238:23LG7FLT4:5:1194:25861:7207,LH00166:238:23LG7FLT4:5:1298:17204:22677,LH00166:238:23LG7FLT4:5:1420:24995:29333,LH00166:238:23LG7FLT4:5:1447:43092:23546,LH00166:238:23LG7FLT4:5:2343:28288:14242,LH00166:238:23LG7FLT4:5:2345:23215:23308,LH00166:238:23LG7FLT4:6:1481:13467:14438,LH00166:238:23LG7FLT4:6:2257:4422:27021,LH00166:238:23LG7FLT4:7:1475:45600:29011,LH00166:238:23LG7FLT4:7:2117:39581:11467,LH00166:238:23LG7FLT4:7:2438:42720:29011,LH00166:238:23LG7FLT4:7:2461:46215:22957,LH00166:238:23LG7FLT4:8:2405:20117:25339,LH00166:238:23LG7FLT4:5:1113:7933:26741,LH00166:238:23LG7FLT4:5:1160:43715:13611,LH00166:238:23LG7FLT4:5:2174:23231:24457,LH00166:238:23LG7FLT4:5:2237:19542:7249,LH00166:238:23LG7FLT4:5:2455:42316:6030,LH00166:238:23LG7FLT4:6:1202:27195:10781,LH00166:238:23LG7FLT4:6:1463:7116:2850,LH00166:238:23LG7FLT4:6:1497:34290:16063,LH00166:238:23LG7FLT4:6:2396:1793:12882,LH00166:238:23LG7FLT4:6:2483:35925:29711,LH00166:238:23LG7FLT4:7:1298:12771:21304,LH00166:238:23LG7FLT4:7:1328:26831:27609,LH00166:238:23LG7FLT4:7:1432:6525:9141,LH00166:238:23LG7FLT4:7:1450:1534:11705,LH00166:238:23LG7FLT4:7:1466:27301:14494,LH00166:238:23LG7FLT4:7:2322:17657:18669,LH00166:238:23LG7FLT4:7:2383:8597:20155,LH00166:238:23LG7FLT4:7:2483:23976:22074,LH00166:238:23LG7FLT4:7:2488:24898:26110,LH00166:238:23LG7FLT4:7:2496:9219:4251,LH00166:238:23LG7FLT4:8:1111:41005:3985,LH00166:238:23LG7FLT4:8:1147:7399:20519,LH00166:238:23LG7FLT4:8:1338:15586:6283,LH00166:238:23LG7FLT4:8:1347:41741:26867,LH00166:238:23LG7FLT4:8:1397:25537:29067,LH00166:238:23LG7FLT4:8:1416:16767:22817 |
| OR6J1 | SH3D19 | -/+ | -/- | 14:22637117 | 4:151165696 | intron | CDS/splice-site | translocation/3'-3' | 6 | 8 | 0 | 21 | 1937 | high | . | . | |SH3_domain(100%),Variant_SH3_domain(100%) | . | . | ENSG00000255804 | ENSG00000109686 | . | ENST00000604030 | downstream | downstream | duplicates(15) | AGGAGCGTCTCTGCCCGGCCGCCCATGTCTGAGATGTGGGGAGCACCTCTGCCCCGCCGCCCTGTCTGGGATGTGAGGAGCGCCTCTGCTGGCCGCAACCCTGTCTGAGAG|ATCCCTTTCAGCTCCCTGCAAAAACAGAACCAATAAAAGAACGAGCAGTTCAACCAGCACCCACCAGGAAGCCCACTGTAATTCGAATTCCAG | . | LH00166:238:23LG7FLT4:5:1123:34428:27904,LH00166:238:23LG7FLT4:5:1361:32786:13597,LH00166:238:23LG7FLT4:5:1361:32802:13597,LH00166:238:23LG7FLT4:5:2367:34387:18641,LH00166:238:23LG7FLT4:5:2454:7601:29473,LH00166:238:23LG7FLT4:5:2482:22714:7053,LH00166:238:23LG7FLT4:6:1226:35229:29515,LH00166:238:23LG7FLT4:6:1279:12480:21808,LH00166:238:23LG7FLT4:6:1411:37073:13877,LH00166:238:23LG7FLT4:6:1476:47210:28016,LH00166:238:23LG7FLT4:6:2230:31329:20659,LH00166:238:23LG7FLT4:6:2280:22317:3648,LH00166:238:23LG7FLT4:6:2373:35771:1196,LH00166:238:23LG7FLT4:6:2456:10538:29683,LH00166:238:23LG7FLT4:6:2462:10328:3060,LH00166:238:23LG7FLT4:7:1250:9486:26572,LH00166:238:23LG7FLT4:7:2154:4196:3312,LH00166:238:23LG7FLT4:7:2225:47550:21066,LH00166:238:23LG7FLT4:8:1214:22649:27511,LH00166:238:23LG7FLT4:8:1424:31151:7460,LH00166:238:23LG7FLT4:8:2286:25108:24541,LH00166:238:23LG7FLT4:8:2398:11477:20295,LH00166:238:23LG7FLT4:5:2220:27883:26152,LH00166:238:23LG7FLT4:5:2242:42041:27441,LH00166:238:23LG7FLT4:6:1147:6186:19062,LH00166:238:23LG7FLT4:6:2295:30164:18978,LH00166:238:23LG7FLT4:6:2478:47873:4083,LH00166:238:23LG7FLT4:7:2106:51967:15208,LH00166:238:23LG7FLT4:8:2282:24170:23223 |
| AGAP3 | HOXD11 | +/+ | +/+ | 7:151086814 | 2:176107588 | CDS | CDS | translocation | 3 | 0 | 0 | 134 | 19 | low | in-frame | . | |Homeodomain(100%),Protein_of_unknown_function_(DUF3528)(57%) | . | . | ENSG00000133612 | ENSG00000128713 | ENST00000397238 | ENST00000249504 | downstream | upstream | duplicates(6),low_entropy(2),mismappers(2),mismatches(1) | CTCGGGCCCCACGGCTCCGAAGCCATGAACTTCCAGGCGGGCGGGGGGCAGAGCCCGCAGCAGCAGCAGAGCCTGGCGGCTCCGGGGGGCGGCGGCG|GCGGCGGCGGCGGCAGCGCGGGGGGCGGC | MNFQAGGGQSPQQQQSLAAPGGGG|gGGGGSAGG | LH00166:238:23LG7FLT4:6:2316:10732:6983,LH00166:238:23LG7FLT4:8:1237:23806:22117,LH00166:238:23LG7FLT4:5:1438:33344:9688,LH00166:238:23LG7FLT4:5:1492:12310:9576,LH00166:238:23LG7FLT4:5:2452:29889:22901,LH00166:238:23LG7FLT4:6:1226:17868:6171,LH00166:238:23LG7FLT4:6:2247:19057:20813,LH00166:238:23LG7FLT4:6:2305:26977:14073,LH00166:238:23LG7FLT4:7:2458:46304:17058,LH00166:238:23LG7FLT4:8:1122:23539:14368,LH00166:238:23LG7FLT4:8:1204:45260:20071,LH00166:238:23LG7FLT4:8:1355:36143:22383,LH00166:238:23LG7FLT4:8:1480:2691:28450,LH00166:238:23LG7FLT4:8:2393:2966:26040 |
| NOL10 | BMPR2 | -/- | +/+ | 2:10644320 | 2:202464809 | CDS/splice-site | CDS/splice-site | inversion | 1 | 1 | 0 | 194 | 1624 | low | stop-codon | . | |Activin_types_I_and_II_receptor_domain(100%),Protein_kinase_domain(100%) | . | . | ENSG00000115761 | ENSG00000204217 | ENST00000381685 | ENST00000374580 | upstream | upstream | duplicates(1) | TGGAGCCAGAGCATGAtCTTAATGATGTTTGTCTCTACC--AACTCAG___GCATGCTTCTGACGGCCAATGAAAtCCCCAAGATGGGCATCTATTACATTCCA|CTTCGCAGAATCAAGAACGGCTATGTGCGTTTAAAGATCCGTATCAGCAAGACCTTGGGATAGGTGAGAGTAGAATCTCTCA | . | LH00166:238:23LG7FLT4:7:1138:1550:24765,LH00166:238:23LG7FLT4:6:1105:23231:15293,LH00166:238:23LG7FLT4:8:2378:48132:18796 |
| ZMYND8 | RIN3 | -/- | +/+ | 20:47249287 | 14:92577360 | CDS/splice-site | CDS/splice-site | translocation | 0 | 1 | 0 | 203 | 288 | low | out-of-frame | . | Bromodomain(100%),PHD-finger(100%),PWWP_domain(100%),Protein_kinase_C-binding_protein_1(76%)|Vacuolar_sorting_protein_9_(VPS9)_domain(100%) | . | . | ENSG00000101040 | ENSG00000100599 | ENST00000446994 | ENST00000216487 | upstream | upstream | . | AGCAGGTTCCAGCTGAATCTTGACAAGACCATAGAGAGTTGCAAAGCACAATTAG|ATGTTCCTGGTTCGCCGGGACAGCAGCTCGAAGCAGCTGGTGCTCTGTGTCCACTTTCCTTCTtTGAACGAAAG | SRFQLNLDKTIESCKAQL|dvpgspgqqleaagalcplsffer | LH00166:238:23LG7FLT4:6:1349:5053:27161 |
| RIN3 | ZMYND8 | +/+ | -/- | 14:92577477 | 20:47262428 | CDS/splice-site | CDS/splice-site | translocation | 0 | 1 | 0 | 197 | 210 | low | in-frame | . | |Protein_kinase_C-binding_protein_1(70%) | . | . | ENSG00000100599 | ENSG00000101040 | ENST00000216487 | ENST00000446994 | downstream | downstream | duplicates(4) | CTCGAATACACCATTAAGGAAGAAAAGTCG|c|CTTCACCAGCCTCCACCAAGACGGGACAAGCAGGGAGTTTATCCGGCAGCCCAAAGCCCTTCTCTCCTCAACTGTCAGCTCCT | LEYTIKEEKS|pSPASTKTGQAGSLSGSPKPFSPQLSA | LH00166:238:23LG7FLT4:5:1172:40536:26628,LH00166:238:23LG7FLT4:5:2338:43934:11271,LH00166:238:23LG7FLT4:6:2346:11258:13555,LH00166:238:23LG7FLT4:6:2442:25011:2878,LH00166:238:23LG7FLT4:8:1302:3532:16175 |
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