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1173_M5U_T1_RNA_SLD_01_A23T55JLT4_2.FusionInspector.fusions.abridged.tsv
Full Path
s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__73d51683--20260607-225254/fusioninspector/1173_M5U_T1_RNA_SLD_01_A23T55JLT4_2.FusionInspector.fusions.abridged.tsv
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12.3 KB
Workflow Run
dev_rna_exp0016-73d51683
Published
Jun 08, 2026 5:34 AM

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#FusionName JunctionReadCount SpanningFragCount est_J est_S LeftGene LeftLocalBreakpoint LeftBreakpoint RightGene RightLocalBreakpoint RightBreakpoint SpliceType LargeAnchorSupport NumCounterFusionLeft NumCounterFusionRight FAR_left FAR_right LeftBreakDinuc LeftBreakEntropy RightBreakDinuc RightBreakEntropy FFPM microh_brkpt_dist num_microh_near_brkpt
MCM9--CCDC162P 500 1 500.00 0.97 MCM9^ENSG00000111877.18 17266 chr6:118856371:- CCDC162P^ENSG00000203799.13 39824 chr6:109227059:+ ONLY_REF_SPLICE YES 82 0 6.05 502.00 GT 1.8323 AG 1.8892 1.7502 2138 0
MCM9--CCDC162P 47 0 47.00 0.00 MCM9^ENSG00000111877.18 13708 chr6:118911650:- CCDC162P^ENSG00000203799.13 39824 chr6:109227059:+ ONLY_REF_SPLICE YES 281 0 0.17 48.00 GT 1.9899 AG 1.8892 0.1642 773 0
MCM9--CCDC162P 16 1 16.00 0.03 MCM9^ENSG00000111877.18 17266 chr6:118856371:- CCDC162P^ENSG00000203799.13 39331 chr6:109226566:+ ONLY_REF_SPLICE YES 82 0 0.22 18.00 GT 1.8323 AG 1.0530 0.056 2220 0
MCM9--CCDC162P 9 0 9.00 0.00 MCM9^ENSG00000111877.18 17266 chr6:118856371:- CCDC162P^ENSG00000203799.13 42582 chr6:109239328:+ ONLY_REF_SPLICE YES 82 0 0.12 10.00 GT 1.8323 AG 1.8892 0.0314 1745 0
MCM9--CCDC162P 5 0 5.00 0.00 MCM9^ENSG00000111877.18 17266 chr6:118856371:- CCDC162P^ENSG00000203799.13 43775 chr6:109242179:+ ONLY_REF_SPLICE YES 82 1 0.07 3.00 GT 1.8323 AG 1.9086 0.0175 1265 0
MCM9--CCDC162P 3 0 3.00 0.00 MCM9^ENSG00000111877.18 13713 chr6:118911645:- CCDC162P^ENSG00000203799.13 39824 chr6:109227059:+ INCL_NON_REF_SPLICE YES 265 0 0.02 4.00 GT 1.9329 AG 1.8892 0.0105 777 0
STX16--NPEPL1 180 0 180.00 0.00 STX16^ENSG00000124222.22 8855 chr20:58673711:+ NPEPL1^ENSG00000215440.12 17277 chr20:58691724:+ ONLY_REF_SPLICE YES 256 16 0.70 10.65 GT 1.7968 AG 1.8256 0.6289 1940 0
STX16--NPEPL1 5 0 5.00 0.00 STX16^ENSG00000124222.22 1835 chr20:58652087:+ NPEPL1^ENSG00000215440.12 17277 chr20:58691724:+ ONLY_REF_SPLICE YES 322 16 0.02 0.35 GT 1.9899 AG 1.8256 0.0175 1258 0
STX16--NPEPL1 4 0 4.00 0.00 STX16^ENSG00000124222.22 8855 chr20:58673711:+ NPEPL1^ENSG00000215440.12 19290 chr20:58693737:+ ONLY_REF_SPLICE YES 256 395 0.02 0.01 GT 1.7968 AG 1.7819 0.014 1248 0
HSP90AB1--SLC35B2 165 0 165.00 0.00 HSP90AB1^ENSG00000096384.20 8098 chr6:44253263:+ SLC35B2^ENSG00000157593.19 13970 chr6:44255644:- INCL_NON_REF_SPLICE YES 981 263 0.17 0.63 GT 1.6402 AG 1.8295 0.5765 282 0
HSP90AB1--SLC35B2 17 0 17.00 0.00 HSP90AB1^ENSG00000096384.20 8096 chr6:44253261:+ SLC35B2^ENSG00000157593.19 13967 chr6:44255647:- INCL_NON_REF_SPLICE YES 974 252 0.02 0.07 CA 1.6402 AA 1.8892 0.0594 285 0
HSP90AB1--SLC35B2 6 0 6.00 0.00 HSP90AB1^ENSG00000096384.20 8095 chr6:44253260:+ SLC35B2^ENSG00000157593.19 13970 chr6:44255644:- INCL_NON_REF_SPLICE YES 938 263 0.01 0.03 GC 1.6402 AG 1.8295 0.021 284 0
HSP90AB1--SLC35B2 1 0 1.00 0.00 HSP90AB1^ENSG00000096384.20 7102 chr6:44252267:+ SLC35B2^ENSG00000157593.19 13970 chr6:44255644:- ONLY_REF_SPLICE YES 1025 263 0.00 0.01 GT 1.4295 AG 1.8295 0.0035 159 0
HSP90AB1--SLC35B2 1 0 1.00 0.00 HSP90AB1^ENSG00000096384.20 4669 chr6:44249834:+ SLC35B2^ENSG00000157593.19 13970 chr6:44255644:- ONLY_REF_SPLICE YES 1431 263 0.00 0.01 GT 1.9329 AG 1.8295 0.0035 724 0
TVP23C--CDRT4 140 0 140.00 0.00 TVP23C^ENSG00000175106.17 14926 chr17:15503098:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- INCL_NON_REF_SPLICE YES 94 12 1.48 10.85 GT 1.9329 AG 1.9899 0.4891 1215 0
TVP23C--CDRT4 119 0 119.00 0.00 TVP23C^ENSG00000175106.17 7982 chr17:15540433:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 328 12 0.36 9.23 GT 1.8323 AG 1.9899 0.4157 2126 0
TVP23C--CDRT4 49 0 49.00 0.00 TVP23C^ENSG00000175106.17 14926 chr17:15503098:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- INCL_NON_REF_SPLICE YES 94 74 0.53 0.67 GT 1.9329 AG 1.6402 0.1712 137 0
TVP23C--CDRT4 36 0 36.00 0.00 TVP23C^ENSG00000175106.17 7982 chr17:15540433:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- ONLY_REF_SPLICE YES 328 74 0.11 0.49 GT 1.8323 AG 1.6402 0.1258 1363 0
TVP23C--CDRT4 18 0 18.00 0.00 TVP23C^ENSG00000175106.17 6853 chr17:15545785:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 142 12 0.13 1.46 GT 1.9086 AG 1.9899 0.0629 1774 0
TVP23C--CDRT4 9 0 9.00 0.00 TVP23C^ENSG00000175106.17 12676 chr17:15516419:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 23 12 0.42 0.77 GT 1.8892 AG 1.9899 0.0314 1949 0
TVP23C--CDRT4 4 0 4.00 0.00 TVP23C^ENSG00000175106.17 6853 chr17:15545785:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- ONLY_REF_SPLICE YES 142 74 0.03 0.07 GT 1.9086 AG 1.6402 0.014 697 0
HNRNPUL1--LIPE-AS1 110 0 110.00 0.00 HNRNPUL1^ENSG00000105323.17 10612 chr19:41279176:+ LIPE-AS1^ENSG00000213904.9 34347 chr19:42485096:+ ONLY_REF_SPLICE YES 295 210 0.38 0.53 GT 1.8062 AG 1.8323 0.3843 1766 0
HNRNPUL1--LIPE-AS1 69 0 69.00 0.00 HNRNPUL1^ENSG00000105323.17 10612 chr19:41279176:+ LIPE-AS1^ENSG00000213904.9 34386 chr19:42485135:+ ONLY_REF_SPLICE YES 295 236 0.24 0.30 GT 1.8062 AG 1.7232 0.2411 1791 0
HNRNPUL1--LIPE-AS1 22 0 22.00 0.00 HNRNPUL1^ENSG00000105323.17 10612 chr19:41279176:+ LIPE-AS1^ENSG00000213904.9 39283 chr19:42651087:+ ONLY_REF_SPLICE YES 295 0 0.08 23.00 GT 1.8062 AG 1.6729 0.0769 2414 0
HBS1L--LINC01312 96 0 96.00 0.00 HBS1L^ENSG00000112339.15 13372 chr6:134996777:- LINC01312^ENSG00000223586.6 33372 chr6:133821547:+ INCL_NON_REF_SPLICE YES 175 0 0.55 97.00 GT 1.2729 AG 1.9329 0.3354 791 0
HBS1L--LINC01312 7 0 7.00 0.00 HBS1L^ENSG00000112339.15 12752 chr6:134997397:- LINC01312^ENSG00000223586.6 33372 chr6:133821547:+ INCL_NON_REF_SPLICE YES 469 0 0.02 8.00 GT 1.8892 AG 1.9329 0.0245 312 0
HBS1L--LINC01312 4 0 4.00 0.00 HBS1L^ENSG00000112339.15 12752 chr6:134997397:- LINC01312^ENSG00000223586.6 34979 chr6:133837593:+ ONLY_REF_SPLICE YES 469 0 0.01 5.00 GT 1.8892 AG 1.9656 0.014 261 0
TLK2--AC240565.1 76 0 65.56 0.00 TLK2^ENSG00000146872.18 17137 chr17:62560126:+ AC240565.1^ENSG00000280136.2 41242 chr17:106864:- ONLY_REF_SPLICE YES 286 30 0.27 2.48 GT 1.8892 AG 1.8892 0.229 1734 0
ANKRD12--RAB31 69 0 69.00 0.00 ANKRD12^ENSG00000101745.17 1869 chr18:9137096:+ RAB31^ENSG00000168461.13 37596 chr18:9775278:+ ONLY_REF_SPLICE YES 39 322 1.75 0.22 GT 1.7465 AG 1.7232 0.2411 3319 0
ANKRD12--RAB31 32 0 32.00 0.00 ANKRD12^ENSG00000101745.17 1738 chr18:9136965:+ RAB31^ENSG00000168461.13 37596 chr18:9775278:+ ONLY_REF_SPLICE YES 21 322 1.50 0.10 GT 1.5058 AG 1.7232 0.1118 3311 0
ANKRD12--RAB31 3 0 3.00 0.00 ANKRD12^ENSG00000101745.17 1748 chr18:9136975:+ RAB31^ENSG00000168461.13 37596 chr18:9775278:+ INCL_NON_REF_SPLICE YES 22 322 0.17 0.01 GT 1.7819 AG 1.7232 0.0105 3311 0
ANKRD12--RAB31 1 0 1.00 0.00 ANKRD12^ENSG00000101745.17 1738 chr18:9136965:+ RAB31^ENSG00000168461.13 38677 chr18:9792154:+ ONLY_REF_SPLICE YES 21 274 0.09 0.01 GT 1.5058 AG 1.9219 0.0035 4391 0
PCDHA7--PCDHAC1 68 0 34.00 0.00 PCDHA7^ENSG00000204963.6 3491 chr5:140836738:+ PCDHAC1^ENSG00000248383.5 12070 chr5:140978949:+ INCL_NON_REF_SPLICE YES 25 0 2.65 69.00 GT 1.8256 AG 1.3996 0.1188 1133 0
PCDHA7--PCDHAC2 68 0 34.00 0.00 PCDHA7^ENSG00000204963.6 3491 chr5:140836738:+ PCDHAC2^ENSG00000243232.6 10934 chr5:140978949:+ INCL_NON_REF_SPLICE YES 25 2 2.65 23.00 GT 1.8256 AG 1.3996 0.1188 2264 0
TLK2P1--AC110079.1 64 0 50.44 0.00 TLK2P1^ENSG00000226049.3 1830 chr17:34039043:- AC110079.1^ENSG00000260404.3 8316 chr4:118595912:+ INCL_NON_REF_SPLICE YES 37 20 1.71 3.10 GT 1.7465 AG 1.8892 0.1762 311 0
LAMA2--CDK19 51 0 51.00 0.00 LAMA2^ENSG00000196569.13 1220 chr6:128883357:+ CDK19^ENSG00000155111.15 83405 chr6:110670541:- ONLY_REF_SPLICE YES 105 349 0.49 0.15 GT 1.7465 AG 1.8892 0.1782 2575 0
LAMA2--CDK19 1 0 1.00 0.00 LAMA2^ENSG00000196569.13 1220 chr6:128883357:+ CDK19^ENSG00000155111.15 85657 chr6:110638706:- ONLY_REF_SPLICE YES 105 233 0.02 0.01 GT 1.7465 AG 1.6402 0.0035 2485 0
AC092807.3--DDAH1 49 0 49.00 0.00 AC092807.3^ENSG00000282057.1 5553 chr1:85496166:- DDAH1^ENSG00000153904.21 16212 chr1:85358847:- ONLY_REF_SPLICE YES 0 24 50.00 2.00 GT 1.5628 AG 1.8062 0.1712 3011 0
AC092807.3--DDAH1 7 0 7.00 0.00 AC092807.3^ENSG00000282057.1 1267 chr1:85577984:- DDAH1^ENSG00000153904.21 16212 chr1:85358847:- ONLY_REF_SPLICE YES 0 24 8.00 0.32 GT 1.8062 AG 1.8062 0.0245 2484 0
AC092807.3--DDAH1 3 0 3.00 0.00 AC092807.3^ENSG00000282057.1 9402 chr1:85488291:- DDAH1^ENSG00000153904.21 16212 chr1:85358847:- ONLY_REF_SPLICE YES 0 24 4.00 0.16 GT 1.8892 AG 1.8062 0.0105 2892 0
FNDC3B--SLC7A14-AS1 42 0 42.00 0.00 FNDC3B^ENSG00000075420.13 6382 chr3:172133546:+ SLC7A14-AS1^ENSG00000285051.2 62716 chr3:170708044:+ ONLY_REF_SPLICE YES 2720 6 0.02 6.14 GT 1.9656 AG 1.7465 0.1467 3137 0
FNDC3B--SLC7A14-AS1 14 0 14.00 0.00 FNDC3B^ENSG00000075420.13 6382 chr3:172133546:+ SLC7A14-AS1^ENSG00000285051.2 54893 chr3:170591114:+ ONLY_REF_SPLICE YES 2720 0 0.01 15.00 GT 1.9656 AG 1.9656 0.0489 3328 0
FNDC3B--SLC7A14-AS1 8 0 8.00 0.00 FNDC3B^ENSG00000075420.13 6382 chr3:172133546:+ SLC7A14-AS1^ENSG00000285051.2 68087 chr3:170859983:+ ONLY_REF_SPLICE YES 2720 7 0.00 1.12 GT 1.9656 AG 1.8892 0.0279 2151 0
FNDC3B--SLC7A14-AS1 3 0 3.00 0.00 FNDC3B^ENSG00000075420.13 6382 chr3:172133546:+ SLC7A14-AS1^ENSG00000285051.2 63867 chr3:170725560:+ ONLY_REF_SPLICE YES 2720 5 0.00 0.67 GT 1.9656 AG 1.9329 0.0105 3373 0
FNDC3B--SLC7A14-AS1 1 0 1.00 0.00 FNDC3B^ENSG00000075420.13 6382 chr3:172133546:+ SLC7A14-AS1^ENSG00000285051.2 60392 chr3:170670174:+ ONLY_REF_SPLICE YES 2720 3 0.00 0.50 GT 1.9656 AG 1.8062 0.0035 2163 0
SESN1--CLVS2 30 1 30.00 1.00 SESN1^ENSG00000080546.13 2025 chr6:109093795:- CLVS2^ENSG00000146352.13 27066 chr6:123063674:+ ONLY_REF_SPLICE YES 91 6 0.35 4.57 GT 1.9329 AG 1.9086 0.1083 1257 0
CDV3--MT-RNR2 24 0 24.00 0.00 CDV3^ENSG00000091527.16 2430 chr3:133575115:+ MT-RNR2^ENSG00000210082.2 12057 chrM:2449:+ INCL_NON_REF_SPLICE YES 563 0 0.04 25.00 GT 1.7968 AG 1.2419 0.0838 3615 0
CDV3--MT-RNR2 5 0 5.00 0.00 CDV3^ENSG00000091527.16 2430 chr3:133575115:+ MT-RNR2^ENSG00000210082.2 12044 chrM:2436:+ INCL_NON_REF_SPLICE YES 563 0 0.01 6.00 GT 1.7968 AG 1.9656 0.0175 3614 0
NKAIN2--LAMA2 24 0 24.00 0.00 NKAIN2^ENSG00000188580.15 1390 chr6:123804254:+ LAMA2^ENSG00000196569.13 20595 chr6:129049918:+ ONLY_REF_SPLICE YES 6 113 3.57 0.22 GT 1.9656 AG 1.7465 0.0838 2216 0
CCDC162P--AL137009.1 23 0 23.00 0.00 CCDC162P^ENSG00000203799.13 52641 chr6:109348547:+ AL137009.1^ENSG00000253194.2 59892 chr6:119006483:+ ONLY_REF_SPLICE YES 0 98 24.00 0.24 GT 1.7465 AG 1.9219 0.0804 1132 0
CCDC162P--AL137009.1 2 0 2.00 0.00 CCDC162P^ENSG00000203799.13 51520 chr6:109344196:+ AL137009.1^ENSG00000253194.2 59892 chr6:119006483:+ ONLY_REF_SPLICE YES 0 98 3.00 0.03 GT 1.8062 AG 1.9219 0.007 2250 0
RPL23AP53--ATP8A2 19 0 19.00 0.00 RPL23AP53^ENSG00000223508.5 1103 chr8:232129:- ATP8A2^ENSG00000132932.18 37085 chr13:25699173:+ ONLY_REF_SPLICE YES 4 0 4.00 20.00 GT 1.9086 AG 1.5656 0.0664 4939 0
RPL23AP53--ATP8A2 2 0 2.00 0.00 RPL23AP53^ENSG00000223508.5 4131 chr8:219290:- ATP8A2^ENSG00000132932.18 37085 chr13:25699173:+ ONLY_REF_SPLICE YES 4 0 0.60 3.00 GT 1.8323 AG 1.5656 0.007 2558 0
LARP4B--LAMA2 18 0 18.00 0.00 LARP4B^ENSG00000107929.15 8420 chr10:863743:- LAMA2^ENSG00000196569.13 34965 chr6:129049918:+ ONLY_REF_SPLICE YES 427 113 0.04 0.17 GT 1.6402 AG 1.7465 0.0629 2349 0
KCNK5--SLC2A12 16 0 16.00 0.00 KCNK5^ENSG00000164626.9 4254 chr6:39194169:- SLC2A12^ENSG00000146411.6 16884 chr6:133991308:- ONLY_REF_SPLICE YES 114 174 0.15 0.10 GT 1.7819 AG 1.6729 0.0559 1783 0
TBC1D32--EPB41L2 16 0 16.00 0.00 TBC1D32^ENSG00000146350.14 23143 chr6:121223236:- EPB41L2^ENSG00000079819.19 55120 chr6:130956499:- ONLY_REF_SPLICE YES 35 367 0.47 0.05 GT 1.8892 AG 1.9899 0.0559 2327 0
TBC1D32--EPB41L2 8 0 8.00 0.00 TBC1D32^ENSG00000146350.14 24232 chr6:121205075:- EPB41L2^ENSG00000079819.19 55120 chr6:130956499:- ONLY_REF_SPLICE YES 37 367 0.24 0.02 GT 1.8295 AG 1.9899 0.0279 1436 0
PTPRK--PDE7B 14 1 14.00 1.00 PTPRK^ENSG00000152894.15 5860 chr6:128397566:- PDE7B^ENSG00000171408.14 57795 chr6:136147351:+ ONLY_REF_SPLICE YES 451 9 0.04 1.60 GT 1.8062 AG 1.8892 0.0524 4711 0
KLRC4--KLRK1 13 0 13.00 0.00 KLRC4^ENSG00000183542.5 3122 chr12:10407636:- KLRK1^ENSG00000213809.9 8583 chr12:10388875:- INCL_NON_REF_SPLICE YES 3 15 3.50 0.88 GT 1.3996 AG 1.9219 0.0454 1207 0
CEP57L1--FIG4 12 0 12.00 0.00 CEP57L1^ENSG00000183137.15 1466 chr6:109095575:+ FIG4^ENSG00000112367.12 81641 chr6:109825088:+ ONLY_REF_SPLICE YES 35 123 0.36 0.10 GT 1.8892 AG 1.7968 0.0419 1290 0
CEP57L1--FIG4 6 0 6.00 0.00 CEP57L1^ENSG00000183137.15 3617 chr6:109106090:+ FIG4^ENSG00000112367.12 81641 chr6:109825088:+ ONLY_REF_SPLICE YES 46 123 0.15 0.06 GT 1.8295 AG 1.7968 0.021 1326 0
62 rows