File Info

Filename
Demultiplex_Stats_aggregate.csv
Full Path
s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0019/A23WJ53LT4/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/reports/Demultiplex_Stats_aggregate.csv
Size
12.4 KB
Published
Jun 08, 2026 12:31 AM
SampleID Lanes Index # Reads # Perfect Index Reads # One Mismatch Index Reads # Two Mismatch Index Reads % Reads % Perfect Index Reads % One Mismatch Index Reads % Two Mismatch Index Reads
FFPE_HD789_01_RNA_13_A23WJ53LT4_1 1,2,3,4,5,6,7,8 CATAAGCGAC-CCTCTTCAAG 464646530 454916845 9729685 0 0.0148 0.9791 0.0209 0.0
FFPE_V4_0002_RNA_0006_A23WJ53LT4_1 1,2,3,4,5,6,7,8 CAACTGCGCA-AGTGTATCCG 329793935 322120936 7672999 0 0.0105 0.9767 0.0233 0.0
NTC_0001_0001_A23WJ53LT4_1 1,2,3,4,5,6,7,8 ATGCTTACTG-ACTGGTTCCG 57079 56010 1069 0 0.0 0.9813 0.0187 0.0
Undetermined 1,2,3,4,5,6,7,8 2318593657 2318593657 0 0 0.0739 1.0 0.0 0.0
aih-tih-sc-00d05f-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 GCCAACAGAC-CGTTCACGTT 231381103 226555585 4825518 0 0.0074 0.9791 0.0209 0.0
aih-tih-sc-0419d4-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 CAAGACTCAA-CACCGTCATA 192511366 188343780 4167586 0 0.0061 0.9784 0.0216 0.0
aih-tih-sc-06a169-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 ATGACAGCAC-CGCTTGTTAT 278806935 272248324 6558611 0 0.0089 0.9765 0.0235 0.0
aih-tih-sc-0992e4-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 CGATGTCTTG-CCGAACGTTC 537460339 527006237 10454102 0 0.0171 0.9805 0.0195 0.0
aih-tih-sc-09b6a3-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 TGACACGATT-GCCTAGGAAG 234410946 229471522 4939424 0 0.0075 0.9789 0.0211 0.0
aih-tih-sc-0ce15f-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 TCGAACACGA-GCGAGGTTCT 172641423 169228771 3412652 0 0.0055 0.9802 0.0198 0.0
aih-tih-sc-12b72b-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 ACAACAGGCT-TCCACTGTTG 312302353 306610636 5691717 0 0.01 0.9818 0.0182 0.0
aih-tih-sc-1351d2-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 CCAGACCGAT-GCTACTTGCA 252997671 247456383 5541288 0 0.0081 0.9781 0.0219 0.0
aih-tih-sc-19e09e-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 CACTTACGGC-GCTGGAGAAG 229023384 224319724 4703660 0 0.0073 0.9795 0.0205 0.0
aih-tih-sc-1dd7a6-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 ACTTCCGGCA-GACCAATTGT 392403583 385266679 7136904 0 0.0125 0.9818 0.0182 0.0
aih-tih-sc-1ffee4-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 CCGAACAGAG-TGATACTCGC 270180010 263755376 6424634 0 0.0086 0.9762 0.0238 0.0
aih-tih-sc-2482ef-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 ATATTCTCGG-AGATGCTCCG 31118756 30389080 729676 0 0.001 0.9766 0.0234 0.0
aih-tih-sc-2798bb-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 CGGAACACAA-AACTCTACCG 410291253 401342349 8948904 0 0.0131 0.9782 0.0218 0.0
aih-tih-sc-284856-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 ACCGAATAGA-TCAGCATCCG 69950795 68496938 1453857 0 0.0022 0.9792 0.0208 0.0
aih-tih-sc-2905df-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 CTAACCTCAA-TCACAGTTGC 317567928 310923435 6644493 0 0.0101 0.9791 0.0209 0.0
aih-tih-sc-2a8dd7-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 CTTGCTATTC-TAGAGTCACG 408918966 400477286 8441680 0 0.013 0.9794 0.0206 0.0
aih-tih-sc-2ca847-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 AGGTAACAAC-GCACGATGCT 169633011 166398403 3234608 0 0.0054 0.9809 0.0191 0.0
aih-tih-sc-2d4b78-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 GTGTCTACAG-ACACTAGCAT 323841579 317380925 6460654 0 0.0103 0.98 0.02 0.0
aih-tih-sc-331e97-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 TTCTCTTAGC-TCCTCGAGCT 841936 825617 16319 0 0.0 0.9806 0.0194 0.0
aih-tih-sc-33eb27-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 AGTTCAGGCG-CACAGCTATT 409393669 401665603 7728066 0 0.0131 0.9811 0.0189 0.0
aih-tih-sc-387c73-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 TCAGTTCGAT-CTGAGTCCTT 324311741 318230031 6081710 0 0.0103 0.9812 0.0188 0.0
aih-tih-sc-38a0a3-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 CTTACGAACT-ACGGACTGAG 440074823 431185906 8888917 0 0.014 0.9798 0.0202 0.0
aih-tih-sc-3a13e9-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 CCTCCTGTGA-CACGTCTACG 509602240 494806402 14795838 0 0.0162 0.971 0.029 0.0
aih-tih-sc-3a9c1f-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 AAGCGCTTAG-TGTCTGTGAC 297985903 291369204 6616699 0 0.0095 0.9778 0.0222 0.0
aih-tih-sc-3b54a2-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 CCGATAGTAG-GAGTTGCATA 207925220 201768634 6156586 0 0.0066 0.9704 0.0296 0.0
aih-tih-sc-3cac57-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 CCTGACATCT-TAGCTACCAG 465131960 452972064 12159896 0 0.0148 0.9739 0.0261 0.0
aih-tih-sc-3e4d53-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 TCTCACCAGG-TTAACAGGTC 246404003 240694626 5709377 0 0.0079 0.9768 0.0232 0.0
aih-tih-sc-3eb8dd-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 TCCAACTGAA-TGTCCGTAGG 222746019 217677211 5068808 0 0.0071 0.9772 0.0228 0.0
aih-tih-sc-408cca-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 CTCCGCCATA-GCGTTCAGCA 251988991 247000555 4988436 0 0.008 0.9802 0.0198 0.0
aih-tih-sc-41b5f1-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 TACGCTACTT-TTAGCGTCTT 131902712 129210208 2692504 0 0.0042 0.9796 0.0204 0.0
aih-tih-sc-431fe7-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 ACGAGACGTC-CGGTCTCTCT 207209433 202800849 4408584 0 0.0066 0.9787 0.0213 0.0
aih-tih-sc-487f7f-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 AGCAATTCAC-TCATCGTCTG 191578225 187990925 3587300 0 0.0061 0.9813 0.0187 0.0
aih-tih-sc-488877-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 ATTCGGCTTA-TTAACGTCCG 366362130 359625381 6736749 0 0.0117 0.9816 0.0184 0.0
aih-tih-sc-4c132f-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 CGGACGATTC-TAGGTGGTGG 341544897 335621508 5923389 0 0.0109 0.9827 0.0173 0.0
aih-tih-sc-4ca6a8-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 GTACAGACCG-GTTCTAATGG 491193141 480746289 10446852 0 0.0157 0.9787 0.0213 0.0
aih-tih-sc-4d6599-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 GACCTACTAT-ATTGTAAGCG 384914970 377344905 7570065 0 0.0123 0.9803 0.0197 0.0
aih-tih-sc-4e749e-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 GCCAGCTATC-TTGTTCGTGT 411387814 403457404 7930410 0 0.0131 0.9807 0.0193 0.0
aih-tih-sc-4fd42c-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 GAACCGCATT-CATTATGCCT 535518717 525508507 10010210 0 0.0171 0.9813 0.0187 0.0
aih-tih-sc-550807-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 AGATGTAAGG-CTGTACCAGG 175782762 172494892 3287870 0 0.0056 0.9813 0.0187 0.0
aih-tih-sc-55b175-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 TCAATTCCGA-TGTAGATCCG 406662501 399078326 7584175 0 0.013 0.9814 0.0186 0.0
aih-tih-sc-560d56-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 ATGTTGCCAC-TAGAAGCCAT 186586260 182818604 3767656 0 0.0059 0.9798 0.0202 0.0
aih-tih-sc-58b830-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 CGCACTGGTA-TTGACCGTCT 224037815 219868925 4168890 0 0.0071 0.9814 0.0186 0.0
aih-tih-sc-5d3207-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 GAGATGAGAG-GAATGGCGTT 162660737 158070906 4589831 0 0.0052 0.9718 0.0282 0.0
aih-tih-sc-5e5452-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 TGGAGATCGA-CAGCGGTATG 136275485 132277966 3997519 0 0.0043 0.9707 0.0293 0.0
aih-tih-sc-606237-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 TCTAGCTGCG-ATAGGTAAGG 471949149 462605563 9343586 0 0.015 0.9802 0.0198 0.0
aih-tih-sc-6064dc-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 AGTAAGGAGA-ATGCTTGGTC 170191648 167010543 3181105 0 0.0054 0.9813 0.0187 0.0
aih-tih-sc-64cace-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 CTATAACGGA-CGTGACATTC 80124129 78411805 1712324 0 0.0026 0.9786 0.0214 0.0
aih-tih-sc-669302-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 GCCACCTAGT-TGCGATGTAT 364407089 355599381 8807708 0 0.0116 0.9758 0.0242 0.0
aih-tih-sc-66e7f5-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 GAGCAGCTTG-TGCCAGTATT 211830011 206728794 5101217 0 0.0068 0.9759 0.0241 0.0
aih-tih-sc-6734d6-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 CCTCGTTGGA-GACTGCGTTA 366057998 357646386 8411612 0 0.0117 0.977 0.023 0.0
aih-tih-sc-674b78-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 AGATTAGCGT-CGCCTTATAT 380490215 369781675 10708540 0 0.0121 0.9719 0.0281 0.0
aih-tih-sc-6832bb-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 CGCCAAGGTA-GATAGTGTTC 307425859 301220063 6205796 0 0.0098 0.9798 0.0202 0.0
aih-tih-sc-693ffe-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 GTTGCATCAA-GTTGATGCGA 290651092 285270662 5380430 0 0.0093 0.9815 0.0185 0.0
aih-tih-sc-6f889c-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 CCTCTATAGA-GTACTTCCAA 132939689 129924122 3015567 0 0.0042 0.9773 0.0227 0.0
aih-tih-sc-6fcd81-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 TTCCTCACGT-ACATGAGCCA 440342264 431910496 8431768 0 0.014 0.9809 0.0191 0.0
aih-tih-sc-6ff823-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 CCACAGCCTT-GCTATTGAAG 273830949 268038382 5792567 0 0.0087 0.9788 0.0212 0.0
aih-tih-sc-7cc8a0-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 AGTAGTGTTG-AACACCTCTT 452689421 443636211 9053210 0 0.0144 0.98 0.02 0.0
aih-tih-sc-7d33b9-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 AGACTAGATG-CGTAACACTA 326406934 319186625 7220309 0 0.0104 0.9779 0.0221 0.0
aih-tih-sc-7de750-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 AATCTGCAGT-TGCGAAGTGA 323230341 317630111 5600230 0 0.0103 0.9827 0.0173 0.0
aih-tih-sc-804b22-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 CTCTATTGAG-CACGCAAGTC 276737638 268161541 8576097 0 0.0088 0.969 0.031 0.0
aih-tih-sc-8353c5-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 TCACCATAAG-AAGTTCAGGA 246830518 241852384 4978134 0 0.0079 0.9798 0.0202 0.0
aih-tih-sc-835699-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 TTACTTCGTG-AAGATCGGAT 426609194 418451177 8158017 0 0.0136 0.9809 0.0191 0.0
aih-tih-sc-87d1a3-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 AGAACTAACG-TTATCGAGAG 314370016 308258313 6111703 0 0.01 0.9806 0.0194 0.0
aih-tih-sc-951f98-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 CCAGTCGTCA-CGCTAGGCTA 347873909 340843661 7030248 0 0.0111 0.9798 0.0202 0.0
aih-tih-sc-965752-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 GACTCATCCA-GAACCAAGCG 427698254 418867826 8830428 0 0.0136 0.9794 0.0206 0.0
aih-tih-sc-96af5b-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 AGTATCCGAT-TATTGCGCTA 410858415 399872934 10985481 0 0.0131 0.9733 0.0267 0.0
aih-tih-sc-98fc22-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 CGAGCGTAGT-TGCTCACGCA 417203162 409750149 7453013 0 0.0133 0.9821 0.0179 0.0
aih-tih-sc-9ab390-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 AACTCTCTAC-ACGGCTTCTC 266033663 259450921 6582742 0 0.0085 0.9753 0.0247 0.0
aih-tih-sc-9be8d4-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 TCGCGACACT-CGAGTAATGT 412388577 404384745 8003832 0 0.0131 0.9806 0.0194 0.0
aih-tih-sc-9ee8d4-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 AACAACACAG-GAACATTGGC 265001028 259632477 5368551 0 0.0084 0.9797 0.0203 0.0
aih-tih-sc-9f6030-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 CAGCAGGTCA-CACTTAGGTA 266065565 261545427 4520138 0 0.0085 0.983 0.017 0.0
aih-tih-sc-9faac1-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 TTACGCGCAT-CTTAACGACA 306746271 301095725 5650546 0 0.0098 0.9816 0.0184 0.0
aih-tih-sc-9fb608-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 TAACTTGGTC-GTCGTGAATC 320527034 314091966 6435068 0 0.0102 0.9799 0.0201 0.0
aih-tih-sc-a19eaa-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 CGCGGTATCT-ATTACCGATC 421900453 414367862 7532591 0 0.0135 0.9821 0.0179 0.0
aih-tih-sc-af602e-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 CCTAAGCTGA-CGTCGCATCT 309381709 302866810 6514899 0 0.0099 0.9789 0.0211 0.0
aih-tih-sc-b107e7-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 AACGAAGATC-TGTGGTCTAA 479819755 469654421 10165334 0 0.0153 0.9788 0.0212 0.0
aih-tih-sc-b675f7-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 AGAAGACCTA-AACCGTAACA 377533605 368027160 9506445 0 0.012 0.9748 0.0252 0.0
aih-tih-sc-b7f13b-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 CCGTGAGTTC-CTTGGTATGA 340839197 334157462 6681735 0 0.0109 0.9804 0.0196 0.0
aih-tih-sc-bec563-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 CGCACTTCGT-AATATGCCAG 417867746 409908769 7958977 0 0.0133 0.981 0.019 0.0
aih-tih-sc-c8485b-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 TCAGCATCTA-CCAGTGTACG 392934492 384978102 7956390 0 0.0125 0.9798 0.0202 0.0
aih-tih-sc-cab2fc-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 AGGATGTCCA-ACTGGACGTT 471640238 461625010 10015228 0 0.015 0.9788 0.0212 0.0
aih-tih-sc-cdd9d2-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 GTATGCCACA-CCGAGTCTTC 460302880 451568152 8734728 0 0.0147 0.981 0.019 0.0
aih-tih-sc-ce4cdc-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 CTGGATTACT-AAGTGTGCTA 222995194 219275700 3719494 0 0.0071 0.9833 0.0167 0.0
aih-tih-sc-ced210-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 TATGCGTAGC-TCAGAGGCAC 321702908 315616507 6086401 0 0.0103 0.9811 0.0189 0.0
aih-tih-sc-cf89e7-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 TCGACGGCAA-GTAGTTGTGT 93528621 91704201 1824420 0 0.003 0.9805 0.0195 0.0
aih-tih-sc-d45d48-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 AATAGGTAGG-TGGCTTATGG 185828070 182304191 3523879 0 0.0059 0.981 0.019 0.0
aih-tih-sc-d64bdd-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 ATAAGCGGAG-CTGTTCTACG 260651228 252359626 8291602 0 0.0083 0.9682 0.0318 0.0
aih-tih-sc-da460d-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 TATCCGCGTC-GTTGCATCGT 426370906 417520501 8850405 0 0.0136 0.9792 0.0208 0.0
aih-tih-sc-e33b0b-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 TAGGCGAATG-AGTCCAGTGA 462188484 452625670 9562814 0 0.0147 0.9793 0.0207 0.0
aih-tih-sc-e4cfff-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 GCAATCTGCT-ACGAACCAAG 265368881 259878947 5489934 0 0.0085 0.9793 0.0207 0.0
aih-tih-sc-f29b4f-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 ACTCCGAAGC-TCCGTGTTGC 189559232 186282162 3277070 0 0.006 0.9827 0.0173 0.0
aih-tih-sc-f2a1b0-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 TAGCGACGGA-GTAACGTTCA 3388009 3299924 88085 0 0.0001 0.974 0.026 0.0
aih-tih-sc-fee548-R1_A23WJ53LT4_1 1,2,3,4,5,6,7,8 TATGGCAAGC-AACAGCAATG 285986683 280247809 5738874 0 0.0091 0.9799 0.0201 0.0
98 rows