File Info
- Filename
- NTC_0001_0001_B23WHTKLT4_1.bam_stat.txt
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0020/B23WHTKLT4/nfcore_rnafusion__73d51683--20260607-225254/QC/rseqc/NTC_0001_0001_B23WHTKLT4_1.bam_stat.txt
- Size
- 810 bytes
- Workflow Run
- dev_rna_exp0020-73d51683
- Published
- Jun 08, 2026 12:28 AM
Content
View in new tab#================================================== #All numbers are READ count #================================================== Total records: 225404 QC failed: 0 Optical/PCR duplicate: 0 Non primary hits 167650 Unmapped reads: 30963 mapq < mapq_cut (non-unique): 19422 mapq >= mapq_cut (unique): 7369 Read-1: 3722 Read-2: 3647 Reads map to '+': 3736 Reads map to '-': 3633 Non-splice reads: 7262 Splice reads: 107 Reads mapped in proper pairs: 6668 Proper-paired reads map to different chrom:0