Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/91/19f89c8bf1ff492efeab780fe900ea/aih-tih-sc-4bcd26-R1_A23YTGFLT4_1.arriba.fusions.filtered_pass_only.tsv
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/38/e2aa34bd3b78fb5a6e37c9d2f857f1/aih-tih-sc-4bcd26-R1_A23YTGFLT4_1.starfusion.starfusion.fusion_predictions.filtered_pass_only.tsv
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/stage-e543dae6-5fea-4720-bfb6-150bf1ff20d4/82/1bfcba5045fc10a52ca200a4890a9a/dummy_file_fusioncatcher.txt
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/aa/421fe2d89e30aff61bc7207da46967/.command.sh
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/aa/421fe2d89e30aff61bc7207da46967/.command.run
Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/fusion_report_db
==> STAGING COMPLETE (6 inputs)
[32mRunning application...[0m
PDXDC2P--PDPR
starfusion
arriba
AC100821.2--LYPLA1
starfusion
TVP23C--CDRT4
arriba
RBM14--RBM4B
arriba
AC092807.3--DDAH1
arriba
PCDHA10--PCDHAC1
arriba
PCDHA10--PCDHAC2
arriba
PCDHA10--PCDHA13
arriba
PCDHA6--PCDHAC1
arriba
PCDHA6--PCDHAC2
arriba
PCDHA6--PCDHA13
arriba
0%| | 0/11 [00:00<?, ?it/s]
Processing PDXDC2P--PDPR: 0%| | 0/11 [00:00<?, ?it/s]
Processing PDXDC2P--PDPR: 9%|▉ | 1/11 [00:00<00:01, 9.22it/s]
Processing AC100821.2--LYPLA1: 9%|▉ | 1/11 [00:00<00:01, 9.22it/s]
Processing AC100821.2--LYPLA1: 18%|█▊ | 2/11 [00:00<00:00, 9.46it/s]
Processing TVP23C--CDRT4: 18%|█▊ | 2/11 [00:00<00:00, 9.46it/s]
Processing TVP23C--CDRT4: 27%|██▋ | 3/11 [00:00<00:00, 9.54it/s]
Processing RBM14--RBM4B: 27%|██▋ | 3/11 [00:00<00:00, 9.54it/s]
Processing RBM14--RBM4B: 36%|███▋ | 4/11 [00:00<00:00, 9.58it/s]
Processing AC092807.3--DDAH1: 36%|███▋ | 4/11 [00:00<00:00, 9.58it/s]
Processing AC092807.3--DDAH1: 45%|████▌ | 5/11 [00:00<00:00, 9.60it/s]
Processing PCDHA10--PCDHAC1: 45%|████▌ | 5/11 [00:00<00:00, 9.60it/s]
Processing PCDHA10--PCDHAC1: 55%|█████▍ | 6/11 [00:00<00:00, 9.62it/s]
Processing PCDHA10--PCDHAC2: 55%|█████▍ | 6/11 [00:00<00:00, 9.62it/s]
Processing PCDHA10--PCDHAC2: 64%|██████▎ | 7/11 [00:00<00:00, 9.63it/s]
Processing PCDHA10--PCDHA13: 64%|██████▎ | 7/11 [00:00<00:00, 9.63it/s]
Processing PCDHA10--PCDHA13: 73%|███████▎ | 8/11 [00:00<00:00, 9.63it/s]
Processing PCDHA6--PCDHAC1: 73%|███████▎ | 8/11 [00:00<00:00, 9.63it/s]
Processing PCDHA6--PCDHAC1: 82%|████████▏ | 9/11 [00:00<00:00, 9.64it/s]
Processing PCDHA6--PCDHAC2: 82%|████████▏ | 9/11 [00:00<00:00, 9.64it/s]
Processing PCDHA6--PCDHAC2: 91%|█████████ | 10/11 [00:01<00:00, 9.64it/s]
Processing PCDHA6--PCDHA13: 91%|█████████ | 10/11 [00:01<00:00, 9.64it/s]
Processing PCDHA6--PCDHA13: 100%|██████████| 11/11 [00:01<00:00, 9.64it/s]
Processing PCDHA6--PCDHA13: 100%|██████████| 11/11 [00:01<00:00, 9.60it/s]
cat: fusion_report_db/DB-timestamp.txt: No such file or directory