Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/64/ae2bba881af4c878c6415f950800a2/659_bTo-T1-TRNA-1_B23MHV2LT4_1.starfusion.starfusion.fusion_predictions.filtered_pass_only.tsv
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/stage-40cc52c0-5bec-40b6-b04d-c64c51f55eff/db/fe6bfaaebdd11206eabb0652108538/dummy_file_fusioncatcher.txt
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3d/bb6ba2168c93f68c8a72352c0f4fbc/.command.sh
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d4/82a54590e4527d6a0f6fe68ce84269/659_bTo-T1-TRNA-1_B23MHV2LT4_1.arriba.fusions.filtered_pass_only.tsv
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3d/bb6ba2168c93f68c8a72352c0f4fbc/.command.run
Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/fusion_report_db
==> STAGING COMPLETE (6 inputs)
[32mRunning application...[0m
ETV6--RASA3
starfusion
arriba
ANKRD46--STK3
starfusion
arriba
UBE2O--AANAT
starfusion
arriba
FHOD3--KIAA1328
starfusion
arriba
RIOK3--LINC01894
starfusion
TOPORS--TJP2
starfusion
UST--TMTC2
starfusion
arriba
RPSAP52--HMGA2
starfusion
NF1--SEPTIN4-AS1
starfusion
arriba
PCDHGB2--PCDHGA8
arriba
PCDHGB2--PCDHGC5
arriba
PCDHGB2--PCDHGB6
arriba
PCDHGB2--PCDHGC4
arriba
PCDHGB2--PCDHGA11
arriba
PCDHGB2--PCDHGA9
arriba
PCDHGB2--PCDHGA12
arriba
PCDHGB2--PCDHGA10
arriba
PCDHGB2--PCDHGB7
arriba
PCDHGB2--PCDHGC3
arriba
AKAP12--PHBP1
arriba
AKAP12--ULBP3
arriba
AC092807.3--DDAH1
arriba
STX16--NPEPL1
arriba
TMED7--TICAM2
arriba
LANCL2--LANCL2
arriba
AC010904.1--ZC3H7B
arriba
AC013460.1--ZC3H7B
arriba
TAF4B--B4GALT6
arriba
0%| | 0/28 [00:00<?, ?it/s]
Processing ETV6--RASA3: 0%| | 0/28 [00:00<?, ?it/s]
Processing ETV6--RASA3: 4%|▎ | 1/28 [00:00<00:02, 9.24it/s]
Processing ANKRD46--STK3: 4%|▎ | 1/28 [00:00<00:02, 9.24it/s]
Processing ANKRD46--STK3: 7%|▋ | 2/28 [00:00<00:02, 9.48it/s]
Processing UBE2O--AANAT: 7%|▋ | 2/28 [00:00<00:02, 9.48it/s]
Processing UBE2O--AANAT: 11%|█ | 3/28 [00:00<00:02, 9.56it/s]
Processing FHOD3--KIAA1328: 11%|█ | 3/28 [00:00<00:02, 9.56it/s]
Processing FHOD3--KIAA1328: 14%|█▍ | 4/28 [00:00<00:02, 9.59it/s]
Processing RIOK3--LINC01894: 14%|█▍ | 4/28 [00:00<00:02, 9.59it/s]
Processing RIOK3--LINC01894: 18%|█▊ | 5/28 [00:00<00:02, 9.61it/s]
Processing TOPORS--TJP2: 18%|█▊ | 5/28 [00:00<00:02, 9.61it/s]
Processing TOPORS--TJP2: 21%|██▏ | 6/28 [00:00<00:02, 9.63it/s]
Processing UST--TMTC2: 21%|██▏ | 6/28 [00:00<00:02, 9.63it/s]
Processing UST--TMTC2: 25%|██▌ | 7/28 [00:00<00:02, 9.63it/s]
Processing RPSAP52--HMGA2: 25%|██▌ | 7/28 [00:00<00:02, 9.63it/s]
Processing RPSAP52--HMGA2: 29%|██▊ | 8/28 [00:00<00:02, 9.64it/s]
Processing NF1--SEPTIN4-AS1: 29%|██▊ | 8/28 [00:00<00:02, 9.64it/s]
Processing NF1--SEPTIN4-AS1: 32%|███▏ | 9/28 [00:00<00:01, 9.64it/s]
Processing PCDHGB2--PCDHGA8: 32%|███▏ | 9/28 [00:00<00:01, 9.64it/s]
Processing PCDHGB2--PCDHGA8: 36%|███▌ | 10/28 [00:01<00:01, 9.64it/s]
Processing PCDHGB2--PCDHGC5: 36%|███▌ | 10/28 [00:01<00:01, 9.64it/s]
Processing PCDHGB2--PCDHGC5: 39%|███▉ | 11/28 [00:01<00:01, 9.65it/s]
Processing PCDHGB2--PCDHGB6: 39%|███▉ | 11/28 [00:01<00:01, 9.65it/s]
Processing PCDHGB2--PCDHGB6: 43%|████▎ | 12/28 [00:01<00:01, 9.65it/s]
Processing PCDHGB2--PCDHGC4: 43%|████▎ | 12/28 [00:01<00:01, 9.65it/s]
Processing PCDHGB2--PCDHGC4: 46%|████▋ | 13/28 [00:01<00:01, 9.65it/s]
Processing PCDHGB2--PCDHGA11: 46%|████▋ | 13/28 [00:01<00:01, 9.65it/s]
Processing PCDHGB2--PCDHGA11: 50%|█████ | 14/28 [00:01<00:01, 9.65it/s]
Processing PCDHGB2--PCDHGA9: 50%|█████ | 14/28 [00:01<00:01, 9.65it/s]
Processing PCDHGB2--PCDHGA9: 54%|█████▎ | 15/28 [00:01<00:01, 9.65it/s]
Processing PCDHGB2--PCDHGA12: 54%|█████▎ | 15/28 [00:01<00:01, 9.65it/s]
Processing PCDHGB2--PCDHGA12: 57%|█████▋ | 16/28 [00:01<00:01, 9.65it/s]
Processing PCDHGB2--PCDHGA10: 57%|█████▋ | 16/28 [00:01<00:01, 9.65it/s]
Processing PCDHGB2--PCDHGA10: 61%|██████ | 17/28 [00:01<00:01, 9.65it/s]
Processing PCDHGB2--PCDHGB7: 61%|██████ | 17/28 [00:01<00:01, 9.65it/s]
Processing PCDHGB2--PCDHGB7: 64%|██████▍ | 18/28 [00:01<00:01, 9.65it/s]
Processing PCDHGB2--PCDHGC3: 64%|██████▍ | 18/28 [00:01<00:01, 9.65it/s]
Processing PCDHGB2--PCDHGC3: 68%|██████▊ | 19/28 [00:01<00:00, 9.65it/s]
Processing AKAP12--PHBP1: 68%|██████▊ | 19/28 [00:01<00:00, 9.65it/s]
Processing AKAP12--PHBP1: 71%|███████▏ | 20/28 [00:02<00:00, 9.65it/s]
Processing AKAP12--ULBP3: 71%|███████▏ | 20/28 [00:02<00:00, 9.65it/s]
Processing AKAP12--ULBP3: 75%|███████▌ | 21/28 [00:02<00:00, 9.65it/s]
Processing AC092807.3--DDAH1: 75%|███████▌ | 21/28 [00:02<00:00, 9.65it/s]
Processing AC092807.3--DDAH1: 79%|███████▊ | 22/28 [00:02<00:00, 9.65it/s]
Processing STX16--NPEPL1: 79%|███████▊ | 22/28 [00:02<00:00, 9.65it/s]
Processing STX16--NPEPL1: 82%|████████▏ | 23/28 [00:02<00:00, 9.65it/s]
Processing TMED7--TICAM2: 82%|████████▏ | 23/28 [00:02<00:00, 9.65it/s]
Processing TMED7--TICAM2: 86%|████████▌ | 24/28 [00:02<00:00, 9.65it/s]
Processing LANCL2--LANCL2: 86%|████████▌ | 24/28 [00:02<00:00, 9.65it/s]
Processing LANCL2--LANCL2: 89%|████████▉ | 25/28 [00:02<00:00, 9.65it/s]
Processing AC010904.1--ZC3H7B: 89%|████████▉ | 25/28 [00:02<00:00, 9.65it/s]
Processing AC010904.1--ZC3H7B: 93%|█████████▎| 26/28 [00:02<00:00, 9.65it/s]
Processing AC013460.1--ZC3H7B: 93%|█████████▎| 26/28 [00:02<00:00, 9.65it/s]
Processing AC013460.1--ZC3H7B: 96%|█████████▋| 27/28 [00:02<00:00, 9.65it/s]
Processing TAF4B--B4GALT6: 96%|█████████▋| 27/28 [00:02<00:00, 9.65it/s]
Processing TAF4B--B4GALT6: 100%|██████████| 28/28 [00:02<00:00, 9.65it/s]
Processing TAF4B--B4GALT6: 100%|██████████| 28/28 [00:02<00:00, 9.63it/s]
cat: fusion_report_db/DB-timestamp.txt: No such file or directory