|
succeeded
|
NFCORE_SAREK:SAREK:CRAM_SAMPLE_INTEGRITY:CRAM_QC_RECAL:MOSDEPTH (pan_diluent_germline)
|
9m 19s |
1s |
4m 55s |
4m 23s |
1.9 GB |
282% |
56.0 GB |
790.1 MB |
55.6 GB |
790.5 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:CRAM_FILTER_LOW_READS:SAMTOOLS_IDXSTATS_COUNT (pan_diluent_germline)
|
4s |
3s |
0s |
0s |
13.1 MB |
97% |
5.8 MB |
458 bytes |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:CRAM_SAMPLE_INTEGRITY:CRAM_QC_RECAL:SAMTOOLS_STATS (pan_diluent_germline)
|
24m 46s |
2s |
20m 24s |
4m 20s |
11.2 MB |
134% |
55.6 GB |
164.3 KB |
55.6 GB |
164.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER:MERGE_SENTIEON_HAPLOTYPER_VCFS (pan_diluent_germline)
|
9s |
2s |
5s |
2s |
320.0 MB |
387% |
100.4 MB |
2.4 MB |
0 bytes |
2.5 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:SENTIEON_HAPLOTYPER_VCF_VARIANT_FILTERING_GATK:CNNSCOREVARIANTS (pan_diluent_germline)
|
1m 11s |
33s |
28s |
9s |
2.3 GB |
643% |
2.0 GB |
29.1 MB |
0 bytes |
22.7 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:SENTIEON_HAPLOTYPER_VCF_VARIANT_FILTERING_GATK:FILTERVARIANTTRANCHES (pan_diluent_germline)
|
2m 2s |
16s |
1m 21s |
25s |
998.1 MB |
126% |
2.0 GB |
2.6 MB |
1.2 GB |
2.6 MB |
1 |