Work Directory

Task
NFCORE_SAREK:SAREK:VCF_QC_BCFTOOLS_VCFTOOLS:VCFTOOLS_TSTV_QUAL (PatientA_tumor2_vs_PatientA_normal;strelka)
Attempt
1
S3 Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d1/e350e2658c1e3c8774955449524d3c

Files (72)

Name Size Modified
.command.begin 6 bytes May 28, 2026 11:52 AM
.command.err 0 bytes May 28, 2026 11:52 AM
.command.log 663 bytes May 28, 2026 11:52 AM
.command.out 0 bytes May 28, 2026 11:52 AM
.command.run 15.8 KB May 28, 2026 11:52 AM
.command.sh 4.6 KB May 28, 2026 11:52 AM
.command.trace 225 bytes May 28, 2026 11:52 AM
.command.yaml 3.6 KB May 28, 2026 11:52 AM
.exitcode 1 byte May 28, 2026 11:52 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_snvs.012 0 bytes May 28, 2026 11:52 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_snvs.012.indv 0 bytes May 28, 2026 11:52 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_snvs.012.pos 0 bytes May 28, 2026 11:52 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_snvs.BEAGLE.GL 0 bytes May 28, 2026 11:52 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_snvs.BEAGLE.PL 0 bytes May 28, 2026 11:52 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_snvs.FILTER.summary 0 bytes May 28, 2026 11:52 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_snvs.FORMAT 0 bytes May 28, 2026 11:52 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_snvs.INFO 0 bytes May 28, 2026 11:52 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_snvs.LROH 0 bytes May 28, 2026 11:52 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_snvs.Tajima.D 0 bytes May 28, 2026 11:52 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_snvs.TsTv 0 bytes May 28, 2026 11:52 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_snvs.TsTv.count 0 bytes May 28, 2026 11:52 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_snvs.TsTv.qual 0 bytes May 28, 2026 11:52 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_snvs.TsTv.summary 0 bytes May 28, 2026 11:52 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_snvs.bcf 0 bytes May 28, 2026 11:52 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_snvs.diff.discordance.matrix 0 bytes May 28, 2026 11:52 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_snvs.diff.indv 0 bytes May 28, 2026 11:52 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_snvs.diff.indv_in_files 0 bytes May 28, 2026 11:52 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_snvs.diff.sites 0 bytes May 28, 2026 11:52 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_snvs.diff.sites_in_files 0 bytes May 28, 2026 11:52 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_snvs.diff.switch 0 bytes May 28, 2026 11:52 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_snvs.frq 0 bytes May 28, 2026 11:52 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_snvs.frq.count 0 bytes May 28, 2026 11:52 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_snvs.gdepth 0 bytes May 28, 2026 11:52 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_snvs.geno.chisq 0 bytes May 28, 2026 11:52 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_snvs.geno.ld 0 bytes May 28, 2026 11:52 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_snvs.hap.ld 0 bytes May 28, 2026 11:52 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_snvs.hapcount 0 bytes May 28, 2026 11:52 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_snvs.het 0 bytes May 28, 2026 11:52 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_snvs.hwe 0 bytes May 28, 2026 11:52 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_snvs.idepth 0 bytes May 28, 2026 11:52 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_snvs.ifreqburden 0 bytes May 28, 2026 11:52 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_snvs.imiss 0 bytes May 28, 2026 11:52 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_snvs.impute.hap 0 bytes May 28, 2026 11:52 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_snvs.impute.hap.indv 0 bytes May 28, 2026 11:52 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_snvs.impute.hap.legend 0 bytes May 28, 2026 11:52 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_snvs.indel.hist 0 bytes May 28, 2026 11:52 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_snvs.interchrom.geno.ld 0 bytes May 28, 2026 11:52 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_snvs.interchrom.hap.ld 0 bytes May 28, 2026 11:52 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_snvs.kept.sites 0 bytes May 28, 2026 11:52 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_snvs.ldepth 0 bytes May 28, 2026 11:52 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_snvs.ldepth.mean 0 bytes May 28, 2026 11:52 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_snvs.ldhat.locs 0 bytes May 28, 2026 11:52 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_snvs.ldhat.sites 0 bytes May 28, 2026 11:52 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_snvs.list.geno.ld 0 bytes May 28, 2026 11:52 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_snvs.list.hap.ld 0 bytes May 28, 2026 11:52 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_snvs.lmiss 0 bytes May 28, 2026 11:52 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_snvs.lqual 0 bytes May 28, 2026 11:52 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_snvs.map 0 bytes May 28, 2026 11:52 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_snvs.mendel 0 bytes May 28, 2026 11:52 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_snvs.ped 0 bytes May 28, 2026 11:52 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_snvs.relatedness 0 bytes May 28, 2026 11:52 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_snvs.relatedness2 0 bytes May 28, 2026 11:52 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_snvs.removed.sites 0 bytes May 28, 2026 11:52 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_snvs.singletons 0 bytes May 28, 2026 11:52 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_snvs.sites.pi 0 bytes May 28, 2026 11:52 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_snvs.snpden 0 bytes May 28, 2026 11:52 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_snvs.tfam 0 bytes May 28, 2026 11:52 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_snvs.tped 0 bytes May 28, 2026 11:52 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_snvs.vcf 0 bytes May 28, 2026 11:52 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_snvs.weir.fst 0 bytes May 28, 2026 11:52 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_snvs.windowed.pi 0 bytes May 28, 2026 11:52 AM
versions.yml 87 bytes May 28, 2026 11:52 AM