Work Directory

Task
NFCORE_SAREK:SAREK:VCF_QC_BCFTOOLS_VCFTOOLS:VCFTOOLS_TSTV_COUNT (PatientB_normal;sentieon_haplotyper_rf)
Attempt
1
S3 Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c4/e8760afda6afa6ca3d2ae0ceedf98b

Files (72)

Name Size Modified
.command.begin 6 bytes May 28, 2026 9:55 AM
.command.err 0 bytes May 28, 2026 9:56 AM
.command.log 645 bytes May 28, 2026 9:56 AM
.command.out 0 bytes May 28, 2026 9:56 AM
.command.run 15.7 KB May 28, 2026 9:55 AM
.command.sh 3.5 KB May 28, 2026 9:55 AM
.command.trace 224 bytes May 28, 2026 9:56 AM
.command.yaml 3.7 KB May 28, 2026 9:55 AM
.exitcode 1 byte May 28, 2026 9:56 AM
PatientB_normal.deconflicted_germline.012 0 bytes May 28, 2026 9:55 AM
PatientB_normal.deconflicted_germline.012.indv 0 bytes May 28, 2026 9:55 AM
PatientB_normal.deconflicted_germline.012.pos 0 bytes May 28, 2026 9:55 AM
PatientB_normal.deconflicted_germline.BEAGLE.GL 0 bytes May 28, 2026 9:55 AM
PatientB_normal.deconflicted_germline.BEAGLE.PL 0 bytes May 28, 2026 9:55 AM
PatientB_normal.deconflicted_germline.FILTER.summary 0 bytes May 28, 2026 9:55 AM
PatientB_normal.deconflicted_germline.FORMAT 0 bytes May 28, 2026 9:55 AM
PatientB_normal.deconflicted_germline.INFO 0 bytes May 28, 2026 9:55 AM
PatientB_normal.deconflicted_germline.LROH 0 bytes May 28, 2026 9:55 AM
PatientB_normal.deconflicted_germline.Tajima.D 0 bytes May 28, 2026 9:55 AM
PatientB_normal.deconflicted_germline.TsTv 0 bytes May 28, 2026 9:55 AM
PatientB_normal.deconflicted_germline.TsTv.count 0 bytes May 28, 2026 9:55 AM
PatientB_normal.deconflicted_germline.TsTv.qual 0 bytes May 28, 2026 9:56 AM
PatientB_normal.deconflicted_germline.TsTv.summary 0 bytes May 28, 2026 9:56 AM
PatientB_normal.deconflicted_germline.bcf 0 bytes May 28, 2026 9:56 AM
PatientB_normal.deconflicted_germline.diff.discordance.matrix 0 bytes May 28, 2026 9:56 AM
PatientB_normal.deconflicted_germline.diff.indv 0 bytes May 28, 2026 9:56 AM
PatientB_normal.deconflicted_germline.diff.indv_in_files 0 bytes May 28, 2026 9:56 AM
PatientB_normal.deconflicted_germline.diff.sites 0 bytes May 28, 2026 9:56 AM
PatientB_normal.deconflicted_germline.diff.sites_in_files 0 bytes May 28, 2026 9:56 AM
PatientB_normal.deconflicted_germline.diff.switch 0 bytes May 28, 2026 9:56 AM
PatientB_normal.deconflicted_germline.frq 0 bytes May 28, 2026 9:56 AM
PatientB_normal.deconflicted_germline.frq.count 0 bytes May 28, 2026 9:56 AM
PatientB_normal.deconflicted_germline.gdepth 0 bytes May 28, 2026 9:56 AM
PatientB_normal.deconflicted_germline.geno.chisq 0 bytes May 28, 2026 9:56 AM
PatientB_normal.deconflicted_germline.geno.ld 0 bytes May 28, 2026 9:56 AM
PatientB_normal.deconflicted_germline.hap.ld 0 bytes May 28, 2026 9:56 AM
PatientB_normal.deconflicted_germline.hapcount 0 bytes May 28, 2026 9:56 AM
PatientB_normal.deconflicted_germline.het 0 bytes May 28, 2026 9:56 AM
PatientB_normal.deconflicted_germline.hwe 0 bytes May 28, 2026 9:56 AM
PatientB_normal.deconflicted_germline.idepth 0 bytes May 28, 2026 9:56 AM
PatientB_normal.deconflicted_germline.ifreqburden 0 bytes May 28, 2026 9:56 AM
PatientB_normal.deconflicted_germline.imiss 0 bytes May 28, 2026 9:56 AM
PatientB_normal.deconflicted_germline.impute.hap 0 bytes May 28, 2026 9:56 AM
PatientB_normal.deconflicted_germline.impute.hap.indv 0 bytes May 28, 2026 9:56 AM
PatientB_normal.deconflicted_germline.impute.hap.legend 0 bytes May 28, 2026 9:56 AM
PatientB_normal.deconflicted_germline.indel.hist 0 bytes May 28, 2026 9:56 AM
PatientB_normal.deconflicted_germline.interchrom.geno.ld 0 bytes May 28, 2026 9:56 AM
PatientB_normal.deconflicted_germline.interchrom.hap.ld 0 bytes May 28, 2026 9:56 AM
PatientB_normal.deconflicted_germline.kept.sites 0 bytes May 28, 2026 9:56 AM
PatientB_normal.deconflicted_germline.ldepth 0 bytes May 28, 2026 9:56 AM
PatientB_normal.deconflicted_germline.ldepth.mean 0 bytes May 28, 2026 9:56 AM
PatientB_normal.deconflicted_germline.ldhat.locs 0 bytes May 28, 2026 9:56 AM
PatientB_normal.deconflicted_germline.ldhat.sites 0 bytes May 28, 2026 9:56 AM
PatientB_normal.deconflicted_germline.list.geno.ld 0 bytes May 28, 2026 9:56 AM
PatientB_normal.deconflicted_germline.list.hap.ld 0 bytes May 28, 2026 9:56 AM
PatientB_normal.deconflicted_germline.lmiss 0 bytes May 28, 2026 9:56 AM
PatientB_normal.deconflicted_germline.lqual 0 bytes May 28, 2026 9:56 AM
PatientB_normal.deconflicted_germline.map 0 bytes May 28, 2026 9:56 AM
PatientB_normal.deconflicted_germline.mendel 0 bytes May 28, 2026 9:56 AM
PatientB_normal.deconflicted_germline.ped 0 bytes May 28, 2026 9:56 AM
PatientB_normal.deconflicted_germline.relatedness 0 bytes May 28, 2026 9:56 AM
PatientB_normal.deconflicted_germline.relatedness2 0 bytes May 28, 2026 9:56 AM
PatientB_normal.deconflicted_germline.removed.sites 0 bytes May 28, 2026 9:56 AM
PatientB_normal.deconflicted_germline.singletons 0 bytes May 28, 2026 9:56 AM
PatientB_normal.deconflicted_germline.sites.pi 0 bytes May 28, 2026 9:56 AM
PatientB_normal.deconflicted_germline.snpden 0 bytes May 28, 2026 9:56 AM
PatientB_normal.deconflicted_germline.tfam 0 bytes May 28, 2026 9:56 AM
PatientB_normal.deconflicted_germline.tped 0 bytes May 28, 2026 9:56 AM
PatientB_normal.deconflicted_germline.vcf 0 bytes May 28, 2026 9:56 AM
PatientB_normal.deconflicted_germline.weir.fst 0 bytes May 28, 2026 9:56 AM
PatientB_normal.deconflicted_germline.windowed.pi 0 bytes May 28, 2026 9:56 AM
versions.yml 88 bytes May 28, 2026 9:56 AM