Work Directory

Task
NFCORE_SAREK:SAREK:VCF_QC_BCFTOOLS_VCFTOOLS:VCFTOOLS_TSTV_COUNT (PatientA_tumor2_vs_PatientA_normal;strelka)
Attempt
1
S3 Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b9/bf8d4d87d973a0e616efdf06e3cebb

Files (72)

Name Size Modified
.command.begin 6 bytes May 28, 2026 9:36 AM
.command.err 0 bytes May 28, 2026 9:37 AM
.command.log 665 bytes May 28, 2026 9:37 AM
.command.out 0 bytes May 28, 2026 9:37 AM
.command.run 15.8 KB May 28, 2026 9:36 AM
.command.sh 4.7 KB May 28, 2026 9:36 AM
.command.trace 224 bytes May 28, 2026 9:37 AM
.command.yaml 3.6 KB May 28, 2026 9:36 AM
.exitcode 1 byte May 28, 2026 9:37 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_indels.012 0 bytes May 28, 2026 9:36 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_indels.012.indv 0 bytes May 28, 2026 9:36 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_indels.012.pos 0 bytes May 28, 2026 9:36 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_indels.BEAGLE.GL 0 bytes May 28, 2026 9:36 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_indels.BEAGLE.PL 0 bytes May 28, 2026 9:36 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_indels.FILTER.summary 0 bytes May 28, 2026 9:36 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_indels.FORMAT 0 bytes May 28, 2026 9:36 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_indels.INFO 0 bytes May 28, 2026 9:36 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_indels.LROH 0 bytes May 28, 2026 9:36 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_indels.Tajima.D 0 bytes May 28, 2026 9:36 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_indels.TsTv 0 bytes May 28, 2026 9:36 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_indels.TsTv.count 0 bytes May 28, 2026 9:36 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_indels.TsTv.qual 0 bytes May 28, 2026 9:37 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_indels.TsTv.summary 0 bytes May 28, 2026 9:37 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_indels.bcf 0 bytes May 28, 2026 9:37 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_indels.diff.discordance.matrix 0 bytes May 28, 2026 9:37 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_indels.diff.indv 0 bytes May 28, 2026 9:37 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_indels.diff.indv_in_files 0 bytes May 28, 2026 9:37 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_indels.diff.sites 0 bytes May 28, 2026 9:37 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_indels.diff.sites_in_files 0 bytes May 28, 2026 9:37 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_indels.diff.switch 0 bytes May 28, 2026 9:37 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_indels.frq 0 bytes May 28, 2026 9:37 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_indels.frq.count 0 bytes May 28, 2026 9:37 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_indels.gdepth 0 bytes May 28, 2026 9:37 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_indels.geno.chisq 0 bytes May 28, 2026 9:37 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_indels.geno.ld 0 bytes May 28, 2026 9:37 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_indels.hap.ld 0 bytes May 28, 2026 9:37 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_indels.hapcount 0 bytes May 28, 2026 9:37 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_indels.het 0 bytes May 28, 2026 9:37 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_indels.hwe 0 bytes May 28, 2026 9:37 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_indels.idepth 0 bytes May 28, 2026 9:37 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_indels.ifreqburden 0 bytes May 28, 2026 9:37 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_indels.imiss 0 bytes May 28, 2026 9:37 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_indels.impute.hap 0 bytes May 28, 2026 9:37 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_indels.impute.hap.indv 0 bytes May 28, 2026 9:37 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_indels.impute.hap.legend 0 bytes May 28, 2026 9:37 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_indels.indel.hist 0 bytes May 28, 2026 9:37 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_indels.interchrom.geno.ld 0 bytes May 28, 2026 9:37 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_indels.interchrom.hap.ld 0 bytes May 28, 2026 9:37 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_indels.kept.sites 0 bytes May 28, 2026 9:37 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_indels.ldepth 0 bytes May 28, 2026 9:37 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_indels.ldepth.mean 0 bytes May 28, 2026 9:37 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_indels.ldhat.locs 0 bytes May 28, 2026 9:37 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_indels.ldhat.sites 0 bytes May 28, 2026 9:37 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_indels.list.geno.ld 0 bytes May 28, 2026 9:37 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_indels.list.hap.ld 0 bytes May 28, 2026 9:37 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_indels.lmiss 0 bytes May 28, 2026 9:37 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_indels.lqual 0 bytes May 28, 2026 9:37 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_indels.map 0 bytes May 28, 2026 9:37 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_indels.mendel 0 bytes May 28, 2026 9:37 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_indels.ped 0 bytes May 28, 2026 9:37 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_indels.relatedness 0 bytes May 28, 2026 9:37 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_indels.relatedness2 0 bytes May 28, 2026 9:37 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_indels.removed.sites 0 bytes May 28, 2026 9:37 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_indels.singletons 0 bytes May 28, 2026 9:37 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_indels.sites.pi 0 bytes May 28, 2026 9:37 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_indels.snpden 0 bytes May 28, 2026 9:37 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_indels.tfam 0 bytes May 28, 2026 9:37 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_indels.tped 0 bytes May 28, 2026 9:37 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_indels.vcf 0 bytes May 28, 2026 9:37 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_indels.weir.fst 0 bytes May 28, 2026 9:37 AM
PatientA_tumor2_vs_PatientA_normal.strelka.somatic_indels.windowed.pi 0 bytes May 28, 2026 9:37 AM
versions.yml 88 bytes May 28, 2026 9:37 AM