File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3e/9acb2275e978d924106faf00e5e64b/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-ce61g0yd because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-05-27 04:59:25,003 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-05-27 04:59:25,802 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-05-27 04:59:25,972 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-05-27 04:59:26,876 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-05-27 04:59:27,029 - cnv_pipe.batch.run_model - INFO - Processing cluster 1091 with 188 probes
2026-05-27 04:59:27,410 - cnv_pipe.batch.run_model.cluster1091 - INFO - Child process started for cluster 1091 with 188 probes
2026-05-27 05:00:21,894 - cnv_pipe.batch.run_model.cluster1091 - INFO - Child process finished cluster 1091. Wrote cluster_1091_samples.csv and cluster_1091_params.csv
2026-05-27 05:00:21,896 - cnv_pipe.batch.run_model - INFO - Cluster 1091 finished in 54.87 seconds. Status: SUCCESS