Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b6/f9366e75d4447864b0d49d6c14d5f7/HCC1395_tumor.recalibrated.bam.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f2/a42072d6d8da66ca10ac3f21132eb0/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b6/f9366e75d4447864b0d49d6c14d5f7/HCC1395_tumor.recalibrated.bam
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr6_138229684-138229952.bed.gz.tbi
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta.fai
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f2/a42072d6d8da66ca10ac3f21132eb0/.command.run
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr6_138229684-138229952.bed.gz
==> STAGING COMPLETE (10 inputs)

[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXmcEr4M/chr6_138229684-138229952.bed.gz.tbi
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXmcEr4M/chr6_138229684-138229952.bed.gz.tbi

Successfully created workflow run script.
To execute the workflow, run the following script and set appropriate options:

/var/tmp/strelka/runWorkflow.py
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXmcEr4M/chr6_138229684-138229952.bed.gz.tbi
[2026-05-27T04:54:26.852442Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Initiating pyFlow run
[2026-05-27T04:54:26.853823Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-05-27T04:54:26.853834Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-05-27T04:54:26.853838Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-05-27T04:54:26.853842Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXmcEr4M'
[2026-05-27T04:54:26.853846Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-05-27T04:54:26.853851Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] [RunParameters] mode: local
[2026-05-27T04:54:26.853855Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-05-27T04:54:26.853858Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] [RunParameters] memMb: 1523736
[2026-05-27T04:54:26.853862Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-05-27T04:54:26.853866Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-05-27T04:54:26.853869Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-05-27T04:54:26.853873Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-05-27T04:54:26.853876Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-05-27T04:54:26.854327Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-05-27T04:54:26.854426Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-05-27T04:54:26.860185Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-05-27T04:54:26.860883Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-05-27T04:54:26.861142Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-05-27T04:54:26.861387Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-05-27T04:54:26.861644Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.862256Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.862358Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.862431Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.862549Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.862614Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.862794Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.862927Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.863279Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-05-27T04:54:26.863467Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.863556Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.863818Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.864249Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.865329Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.866063Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.866291Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-05-27T04:54:26.866543Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.866617Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.866729Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.866792Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.866965Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.867032Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.867143Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.867209Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.867347Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.867486Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.867909Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.867978Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.868091Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.868158Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.868282Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.868372Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.868492Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.868556Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.868669Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.868732Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.868848Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.868958Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.869170Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.869530Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.869721Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.870135Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.870244Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.870309Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.870419Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.870481Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.870591Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.870653Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.870870Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.870935Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.871073Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.871149Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.871689Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.871755Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.871865Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.871929Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.872039Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.872104Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.872210Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.872271Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.872381Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.872441Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.872551Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.872615Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.872795Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.873335Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.873445Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.873509Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.873618Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.873680Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.873787Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.873848Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.873951Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.874012Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.875212Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.875777Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.875906Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.875976Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.876088Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.876155Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.876264Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.876326Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.876438Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.876499Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.876607Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.876675Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.876816Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.877427Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.877535Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.877600Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.877710Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.877775Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.877883Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.877969Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.878089Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.878151Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.878269Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.878331Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.878629Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.879008Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.879964Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.880046Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.880168Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.880235Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.880350Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.880418Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.880527Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.880598Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.880707Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.880863Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.883523Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.884135Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.884682Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.885316Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.898982Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.899751Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.899901Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:26.900087Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.901246Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.901392Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' from sub-workflow 'CallGenome'
[2026-05-27T04:54:26.901513Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.901869Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' from sub-workflow 'CallGenome'
[2026-05-27T04:54:26.902097Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.902334Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' from sub-workflow 'CallGenome'
[2026-05-27T04:54:26.902854Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.903331Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-05-27T04:54:26.904143Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' from sub-workflow 'CallGenome'
[2026-05-27T04:54:26.904374Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.904973Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-05-27T04:54:26.905642Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-05-27T04:54:26.905820Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' from sub-workflow 'CallGenome'
[2026-05-27T04:54:26.906257Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-05-27T04:54:26.907475Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' from sub-workflow 'CallGenome'
[2026-05-27T04:54:26.910470Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0002] Task initiated on local node
[2026-05-27T04:54:26.913841Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0005] Task initiated on local node
[2026-05-27T04:54:26.916483Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0003] Task initiated on local node
[2026-05-27T04:54:26.918841Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0010] Task initiated on local node
[2026-05-27T04:54:26.922718Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0006] Task initiated on local node
[2026-05-27T04:54:26.924960Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0009] Task initiated on local node
[2026-05-27T04:54:26.926857Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0007] Task initiated on local node
[2026-05-27T04:54:26.928167Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0004] Task initiated on local node
[2026-05-27T04:54:26.991773Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:26.992713Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' from sub-workflow 'CallGenome'
[2026-05-27T04:54:26.995181Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0005] Task initiated on local node
[2026-05-27T04:54:27.000638Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:27.000696Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:27.001640Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-05-27T04:54:27.001895Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' from sub-workflow 'CallGenome'
[2026-05-27T04:54:27.005983Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0007] Task initiated on local node
[2026-05-27T04:54:27.007056Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0002] Task initiated on local node
[2026-05-27T04:54:27.118029Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:27.119202Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-05-27T04:54:27.122424Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0013] Task initiated on local node
[2026-05-27T04:54:27.434531Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:27.435777Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' from sub-workflow 'CallGenome'
[2026-05-27T04:54:27.438910Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0001] Task initiated on local node
[2026-05-27T04:54:27.650403Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:27.651684Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' from sub-workflow 'CallGenome'
[2026-05-27T04:54:27.654537Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0010] Task initiated on local node
[2026-05-27T04:54:27.715751Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:27.715845Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:27.716962Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' from sub-workflow 'CallGenome'
[2026-05-27T04:54:27.717310Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-05-27T04:54:27.720481Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0005] Task initiated on local node
[2026-05-27T04:54:27.721714Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0003] Task initiated on local node
[2026-05-27T04:54:27.751145Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:27.752533Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-05-27T04:54:27.753041Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:27.755746Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' from sub-workflow 'CallGenome'
[2026-05-27T04:54:27.755984Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0011] Task initiated on local node
[2026-05-27T04:54:27.758890Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0008] Task initiated on local node
[2026-05-27T04:54:27.820016Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:27.821259Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-05-27T04:54:27.824209Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0009] Task initiated on local node
[2026-05-27T04:54:27.853376Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:27.854604Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' from sub-workflow 'CallGenome'
[2026-05-27T04:54:27.857516Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0007] Task initiated on local node
[2026-05-27T04:54:27.886446Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:27.887657Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' from sub-workflow 'CallGenome'
[2026-05-27T04:54:27.889839Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:27.890808Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0001] Task initiated on local node
[2026-05-27T04:54:27.891280Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' from sub-workflow 'CallGenome'
[2026-05-27T04:54:27.893978Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0004] Task initiated on local node
[2026-05-27T04:54:28.005684Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:28.006820Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' from sub-workflow 'CallGenome'
[2026-05-27T04:54:28.009624Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0005] Task initiated on local node
[2026-05-27T04:54:28.071075Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:28.072281Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' from sub-workflow 'CallGenome'
[2026-05-27T04:54:28.075229Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0011] Task initiated on local node
[2026-05-27T04:54:28.237009Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:28.238630Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' from sub-workflow 'CallGenome'
[2026-05-27T04:54:28.241430Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0002] Task initiated on local node
[2026-05-27T04:54:28.302811Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:28.303977Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' from sub-workflow 'CallGenome'
[2026-05-27T04:54:28.306730Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0002] Task initiated on local node
[2026-05-27T04:54:28.418372Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:28.419700Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-05-27T04:54:28.423136Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0001] Task initiated on local node
[2026-05-27T04:54:28.484479Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:28.485725Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-05-27T04:54:28.488699Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0001] Task initiated on local node
[2026-05-27T04:54:28.550330Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:28.551594Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' from sub-workflow 'CallGenome'
[2026-05-27T04:54:28.555237Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0006] Task initiated on local node
[2026-05-27T04:54:28.767269Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:28.768476Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-05-27T04:54:28.771594Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0002] Task initiated on local node
[2026-05-27T04:54:28.832981Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:28.834200Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' from sub-workflow 'CallGenome'
[2026-05-27T04:54:28.837163Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0007] Task initiated on local node
[2026-05-27T04:54:29.099007Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:29.101519Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' from sub-workflow 'CallGenome'
[2026-05-27T04:54:29.101880Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:29.104949Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-05-27T04:54:29.105338Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0004] Task initiated on local node
[2026-05-27T04:54:29.107601Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0013] Task initiated on local node
[2026-05-27T04:54:29.169172Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:29.169268Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:29.170630Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' from sub-workflow 'CallGenome'
[2026-05-27T04:54:29.170953Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-05-27T04:54:29.174662Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0005] Task initiated on local node
[2026-05-27T04:54:29.176272Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0009] Task initiated on local node
[2026-05-27T04:54:29.235982Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:29.236094Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:29.237508Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' from sub-workflow 'CallGenome'
[2026-05-27T04:54:29.238073Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' from sub-workflow 'CallGenome'
[2026-05-27T04:54:29.241357Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0001] Task initiated on local node
[2026-05-27T04:54:29.242353Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0009] Task initiated on local node
[2026-05-27T04:54:29.302734Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:29.304180Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' from sub-workflow 'CallGenome'
[2026-05-27T04:54:29.307713Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0012] Task initiated on local node
[2026-05-27T04:54:29.769676Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:29.770831Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' from sub-workflow 'CallGenome'
[2026-05-27T04:54:29.774001Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0004] Task initiated on local node
[2026-05-27T04:54:29.787121Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:29.788278Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' from sub-workflow 'CallGenome'
[2026-05-27T04:54:29.791267Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0011] Task initiated on local node
[2026-05-27T04:54:29.820524Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:29.822206Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-05-27T04:54:29.822452Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:29.824842Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' from sub-workflow 'CallGenome'
[2026-05-27T04:54:29.825378Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0009] Task initiated on local node
[2026-05-27T04:54:29.827732Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0009] Task initiated on local node
[2026-05-27T04:54:29.857123Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:29.858647Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-05-27T04:54:29.858973Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:29.862049Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-05-27T04:54:29.862276Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0010] Task initiated on local node
[2026-05-27T04:54:29.865244Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0008] Task initiated on local node
[2026-05-27T04:54:29.926419Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:29.926549Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:29.927607Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' from sub-workflow 'CallGenome'
[2026-05-27T04:54:29.928137Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' from sub-workflow 'CallGenome'
[2026-05-27T04:54:29.931694Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0011] Task initiated on local node
[2026-05-27T04:54:29.993276Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:29.994420Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' from sub-workflow 'CallGenome'
[2026-05-27T04:54:29.997995Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0001] Task initiated on local node
[2026-05-27T04:54:29.999797Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0006] Task initiated on local node
[2026-05-27T04:54:30.003855Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:30.004864Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' from sub-workflow 'CallGenome'
[2026-05-27T04:54:30.007945Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0000] Task initiated on local node
[2026-05-27T04:54:30.037036Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:30.038083Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' from sub-workflow 'CallGenome'
[2026-05-27T04:54:30.041432Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0007] Task initiated on local node
[2026-05-27T04:54:30.102595Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:30.102703Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:30.103730Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-05-27T04:54:30.104064Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' from sub-workflow 'CallGenome'
[2026-05-27T04:54:30.107377Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0006] Task initiated on local node
[2026-05-27T04:54:30.108631Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0013] Task initiated on local node
[2026-05-27T04:54:30.136890Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:30.137964Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' from sub-workflow 'CallGenome'
[2026-05-27T04:54:30.140837Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0011] Task initiated on local node
[2026-05-27T04:54:30.202255Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:30.202347Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:30.203355Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' from sub-workflow 'CallGenome'
[2026-05-27T04:54:30.203790Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' from sub-workflow 'CallGenome'
[2026-05-27T04:54:30.206998Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0009] Task initiated on local node
[2026-05-27T04:54:30.208033Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0004] Task initiated on local node
[2026-05-27T04:54:30.268526Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:30.268636Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:30.269633Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' from sub-workflow 'CallGenome'
[2026-05-27T04:54:30.270312Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-05-27T04:54:30.273787Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0002] Task initiated on local node
[2026-05-27T04:54:30.274633Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0014] Task initiated on local node
[2026-05-27T04:54:30.302796Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:30.303857Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' from sub-workflow 'CallGenome'
[2026-05-27T04:54:30.306833Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0006] Task initiated on local node
[2026-05-27T04:54:30.367954Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:30.368944Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-05-27T04:54:30.371892Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0000] Task initiated on local node
[2026-05-27T04:54:30.401170Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:30.402115Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' from sub-workflow 'CallGenome'
[2026-05-27T04:54:30.405320Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0008] Task initiated on local node
[2026-05-27T04:54:30.434584Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:30.435520Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-05-27T04:54:30.438718Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_005_chr6_0000] Task initiated on local node
[2026-05-27T04:54:30.443726Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:30.444636Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' from sub-workflow 'CallGenome'
[2026-05-27T04:54:30.447474Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0008] Task initiated on local node
[2026-05-27T04:54:30.509107Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:30.510115Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-05-27T04:54:30.513056Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0000] Task initiated on local node
[2026-05-27T04:54:30.574519Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:30.575545Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' from sub-workflow 'CallGenome'
[2026-05-27T04:54:30.578468Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0003] Task initiated on local node
[2026-05-27T04:54:30.990897Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:30.991972Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' from sub-workflow 'CallGenome'
[2026-05-27T04:54:30.995512Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000] Task initiated on local node
[2026-05-27T04:54:31.106824Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:31.107847Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' from sub-workflow 'CallGenome'
[2026-05-27T04:54:31.110642Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000] Task initiated on local node
[2026-05-27T04:54:31.123764Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:31.124697Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' from sub-workflow 'CallGenome'
[2026-05-27T04:54:31.127769Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0004] Task initiated on local node
[2026-05-27T04:54:31.156826Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:31.156923Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:31.157853Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' from sub-workflow 'CallGenome'
[2026-05-27T04:54:31.158426Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' from sub-workflow 'CallGenome'
[2026-05-27T04:54:31.161743Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0012] Task initiated on local node
[2026-05-27T04:54:31.163075Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0003] Task initiated on local node
[2026-05-27T04:54:31.222953Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:31.224515Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-05-27T04:54:31.227615Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0011] Task initiated on local node
[2026-05-27T04:54:31.288925Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:31.289064Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:31.290006Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' from sub-workflow 'CallGenome'
[2026-05-27T04:54:31.290331Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-05-27T04:54:31.293616Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0006] Task initiated on local node
[2026-05-27T04:54:31.294733Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0007] Task initiated on local node
[2026-05-27T04:54:31.355054Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:31.355148Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:31.356067Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' from sub-workflow 'CallGenome'
[2026-05-27T04:54:31.356531Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' from sub-workflow 'CallGenome'
[2026-05-27T04:54:31.359838Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0007] Task initiated on local node
[2026-05-27T04:54:31.360907Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0006] Task initiated on local node
[2026-05-27T04:54:31.420841Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:31.421872Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' from sub-workflow 'CallGenome'
[2026-05-27T04:54:31.424951Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0002] Task initiated on local node
[2026-05-27T04:54:31.636801Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:31.637703Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-05-27T04:54:31.640503Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0014] Task initiated on local node
[2026-05-27T04:54:31.653480Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:31.654214Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-05-27T04:54:31.657671Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0008] Task initiated on local node
[2026-05-27T04:54:31.670556Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:31.671527Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' from sub-workflow 'CallGenome'
[2026-05-27T04:54:31.674816Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0010] Task initiated on local node
[2026-05-27T04:54:31.687592Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:31.688442Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-05-27T04:54:31.691759Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0010] Task initiated on local node
[2026-05-27T04:54:31.752569Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:31.752673Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:31.753539Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-05-27T04:54:31.753880Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-05-27T04:54:31.757444Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0005] Task initiated on local node
[2026-05-27T04:54:31.758318Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0012] Task initiated on local node
[2026-05-27T04:54:31.819793Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:31.820725Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' from sub-workflow 'CallGenome'
[2026-05-27T04:54:31.824230Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0000] Task initiated on local node
[2026-05-27T04:54:31.986035Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:31.986836Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' from sub-workflow 'CallGenome'
[2026-05-27T04:54:31.990092Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0003] Task initiated on local node
[2026-05-27T04:54:32.251906Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:32.252002Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:32.252780Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' from sub-workflow 'CallGenome'
[2026-05-27T04:54:32.253135Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' from sub-workflow 'CallGenome'
[2026-05-27T04:54:32.256502Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0003] Task initiated on local node
[2026-05-27T04:54:32.257419Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0010] Task initiated on local node
[2026-05-27T04:54:32.317531Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:32.317611Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:32.318313Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' from sub-workflow 'CallGenome'
[2026-05-27T04:54:32.318749Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' from sub-workflow 'CallGenome'
[2026-05-27T04:54:32.322195Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0011] Task initiated on local node
[2026-05-27T04:54:32.323223Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0012] Task initiated on local node
[2026-05-27T04:54:32.584112Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:32.584853Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' from sub-workflow 'CallGenome'
[2026-05-27T04:54:32.587641Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0006] Task initiated on local node
[2026-05-27T04:54:32.649097Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:32.649178Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:32.649840Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-05-27T04:54:32.650238Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' from sub-workflow 'CallGenome'
[2026-05-27T04:54:32.653738Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0007] Task initiated on local node
[2026-05-27T04:54:32.654800Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0010] Task initiated on local node
[2026-05-27T04:54:32.714456Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:32.715265Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' from sub-workflow 'CallGenome'
[2026-05-27T04:54:32.718194Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0003] Task initiated on local node
[2026-05-27T04:54:32.779842Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:32.780653Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' from sub-workflow 'CallGenome'
[2026-05-27T04:54:32.784104Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000] Task initiated on local node
[2026-05-27T04:54:32.895373Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:32.896124Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' from sub-workflow 'CallGenome'
[2026-05-27T04:54:32.899279Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0005] Task initiated on local node
[2026-05-27T04:54:32.928493Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:32.929193Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-05-27T04:54:32.932360Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0012] Task initiated on local node
[2026-05-27T04:54:32.961227Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:32.961922Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' from sub-workflow 'CallGenome'
[2026-05-27T04:54:32.964725Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0000] Task initiated on local node
[2026-05-27T04:54:32.993870Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:32.994606Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' from sub-workflow 'CallGenome'
[2026-05-27T04:54:32.997321Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0008] Task initiated on local node
[2026-05-27T04:54:33.058899Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:33.059651Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' from sub-workflow 'CallGenome'
[2026-05-27T04:54:33.063001Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0008] Task initiated on local node
[2026-05-27T04:54:33.174077Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:33.174170Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:33.174817Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' from sub-workflow 'CallGenome'
[2026-05-27T04:54:33.175374Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' from sub-workflow 'CallGenome'
[2026-05-27T04:54:33.178505Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0002] Task initiated on local node
[2026-05-27T04:54:33.179795Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0003] Task initiated on local node
[2026-05-27T04:54:33.207767Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:33.208464Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-05-27T04:54:33.211722Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0004] Task initiated on local node
[2026-05-27T04:54:33.212082Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:33.212603Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' from sub-workflow 'CallGenome'
[2026-05-27T04:54:33.215247Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000] Task initiated on local node
[2026-05-27T04:54:33.244720Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:33.245462Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' from sub-workflow 'CallGenome'
[2026-05-27T04:54:33.248227Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0009] Task initiated on local node
[2026-05-27T04:54:33.277476Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:33.278442Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-05-27T04:54:33.278722Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:33.279540Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' from sub-workflow 'CallGenome'
[2026-05-27T04:54:33.282283Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0004] Task initiated on local node
[2026-05-27T04:54:33.283634Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0013] Task initiated on local node
[2026-05-27T04:54:33.288391Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:33.288973Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' from sub-workflow 'CallGenome'
[2026-05-27T04:54:33.291542Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0000] Task initiated on local node
[2026-05-27T04:54:33.320866Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:33.320948Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:33.321888Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' from sub-workflow 'CallGenome'
[2026-05-27T04:54:33.322224Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' from sub-workflow 'CallGenome'
[2026-05-27T04:54:33.322778Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:33.326784Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0001] Task initiated on local node
[2026-05-27T04:54:33.328036Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0000] Task initiated on local node
[2026-05-27T04:54:33.440067Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:33.440762Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' from sub-workflow 'CallGenome'
[2026-05-27T04:54:33.444068Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0005] Task initiated on local node
[2026-05-27T04:54:33.472949Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:33.587532Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:33.588147Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' from sub-workflow 'CallGenome'
[2026-05-27T04:54:33.590881Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0011] Task initiated on local node
[2026-05-27T04:54:33.652366Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:33.967307Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:33.967897Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' from sub-workflow 'CallGenome'
[2026-05-27T04:54:33.970751Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0010] Task initiated on local node
[2026-05-27T04:54:34.000273Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:34.000924Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:34.001403Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' from sub-workflow 'CallGenome'
[2026-05-27T04:54:34.004202Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0012] Task initiated on local node
[2026-05-27T04:54:34.033219Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:34.448470Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:34.449046Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' from sub-workflow 'CallGenome'
[2026-05-27T04:54:34.451669Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0000] Task initiated on local node
[2026-05-27T04:54:34.452671Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:34.453144Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' from sub-workflow 'CallGenome'
[2026-05-27T04:54:34.455591Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0001] Task initiated on local node
[2026-05-27T04:54:34.485208Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:34.485276Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:34.699712Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:34.700197Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' from sub-workflow 'CallGenome'
[2026-05-27T04:54:34.702486Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0008] Task initiated on local node
[2026-05-27T04:54:34.732390Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:34.732685Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:34.732806Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-05-27T04:54:34.733205Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-05-27T04:54:34.733387Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-05-27T04:54:34.737897Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-05-27T04:54:34.740939Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-05-27T04:54:34.761585Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-05-27T04:54:34.765708Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:34.765772Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:34.766464Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-05-27T04:54:34.766766Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-05-27T04:54:34.767322Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:34.769485Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-05-27T04:54:34.770807Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-05-27T04:54:34.800379Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:34.800438Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:34.800607Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-05-27T04:54:34.802872Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-05-27T04:54:34.832579Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:37.502603Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-05-27T04:54:45.742038Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-05-27T04:54:45.742038Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] 
[2026-05-27T04:54:45.742038Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-05-27T04:54:45.742101Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] 
[2026-05-27T04:54:45.742108Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-05-27T04:54:45.742115Z] [nf-f2a42072d6d8da66ca10ac3f21132eb0-44c1f-6h5dw] [590_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec