File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1d/9d5771298e4e9eaed69d8687a53127/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-op6p3x8r because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-05-27 04:59:11,825 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-05-27 04:59:12,640 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-05-27 04:59:12,809 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-05-27 04:59:13,730 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-05-27 04:59:13,805 - cnv_pipe.batch.run_model - INFO - Processing cluster 1054 with 124 probes
2026-05-27 04:59:14,285 - cnv_pipe.batch.run_model.cluster1054 - INFO - Child process started for cluster 1054 with 124 probes
2026-05-27 04:59:52,663 - cnv_pipe.batch.run_model.cluster1054 - INFO - Child process finished cluster 1054. Wrote cluster_1054_samples.csv and cluster_1054_params.csv
2026-05-27 04:59:52,664 - cnv_pipe.batch.run_model - INFO - Cluster 1054 finished in 38.86 seconds. Status: SUCCESS