File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/74/0eca04fbbb172b467107ff1e1c31c7/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-no8cg8hq because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-05-27 04:59:10,801 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-05-27 04:59:11,616 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-05-27 04:59:11,791 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-05-27 04:59:12,807 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-05-27 04:59:12,878 - cnv_pipe.batch.run_model - INFO - Processing cluster 1051 with 192 probes
2026-05-27 04:59:13,267 - cnv_pipe.batch.run_model.cluster1051 - INFO - Child process started for cluster 1051 with 192 probes
2026-05-27 05:00:09,618 - cnv_pipe.batch.run_model.cluster1051 - INFO - Child process finished cluster 1051. Wrote cluster_1051_samples.csv and cluster_1051_params.csv
2026-05-27 05:00:09,619 - cnv_pipe.batch.run_model - INFO - Cluster 1051 finished in 56.74 seconds. Status: SUCCESS