File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c9/1f66e505ea02114fc3d90aea3f2900/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-3n1zl6lp because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-05-27 04:59:18,578 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-05-27 04:59:19,455 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-05-27 04:59:19,633 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-05-27 04:59:20,630 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-05-27 04:59:20,706 - cnv_pipe.batch.run_model - INFO - Processing cluster 834 with 190 probes
2026-05-27 04:59:21,214 - cnv_pipe.batch.run_model.cluster834 - INFO - Child process started for cluster 834 with 190 probes
2026-05-27 05:00:18,454 - cnv_pipe.batch.run_model.cluster834 - INFO - Child process finished cluster 834. Wrote cluster_834_samples.csv and cluster_834_params.csv
2026-05-27 05:00:18,456 - cnv_pipe.batch.run_model - INFO - Cluster 834 finished in 57.75 seconds. Status: SUCCESS