File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/94/c580ef80983f9c93b980bfbbc6efe7/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-7nq6pgif because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-05-27 04:58:59,779 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-05-27 04:59:00,583 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-05-27 04:59:00,753 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-05-27 04:59:01,684 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-05-27 04:59:01,863 - cnv_pipe.batch.run_model - INFO - Processing cluster 984 with 145 probes
2026-05-27 04:59:02,237 - cnv_pipe.batch.run_model.cluster984 - INFO - Child process started for cluster 984 with 145 probes
2026-05-27 04:59:46,443 - cnv_pipe.batch.run_model.cluster984 - INFO - Child process finished cluster 984. Wrote cluster_984_samples.csv and cluster_984_params.csv
2026-05-27 04:59:46,444 - cnv_pipe.batch.run_model - INFO - Cluster 984 finished in 44.58 seconds. Status: SUCCESS