cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i HCC1395_BL.md.bam --algo HsMetricAlgo --targets_list targets/altera_v3_targets_postQC_hg38.bed --baits_list baits/xgen-exome-hyb-panel-v2_AND_altera_v3_probes_short_hg38_AND_cdx_spike_custom30off4x_hg38_AND_foresight_clarity.bed HCC1395_BL_altera_v3_targets_postQC_hg38.sentieon.hs_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:137000001, elapsed 0.0s, est remaining 0.7s, peak mem 100MB, user 0.1s, sys 0.8s, output queue size 24
progress 10% @chr2:57000001, elapsed 0.1s, est remaining 0.6s, peak mem 100MB, user 0.1s, sys 1.6s, output queue size 25
progress 15% @chr2:235000001, elapsed 0.1s, est remaining 0.6s, peak mem 100MB, user 0.2s, sys 2.6s, output queue size 22
progress 20% @chr3:156000001, elapsed 0.1s, est remaining 0.6s, peak mem 100MB, user 0.3s, sys 3.5s, output queue size 22
progress 25% @chr4:120000001, elapsed 0.2s, est remaining 0.5s, peak mem 100MB, user 0.5s, sys 4.3s, output queue size 22
progress 30% @chr5:75000001, elapsed 0.2s, est remaining 0.5s, peak mem 100MB, user 0.6s, sys 5.2s, output queue size 15
progress 35% @chr6:50000001, elapsed 0.2s, est remaining 0.4s, peak mem 100MB, user 0.7s, sys 6.2s, output queue size 15
progress 40% @chr7:49000001, elapsed 0.3s, est remaining 0.4s, peak mem 100MB, user 0.7s, sys 7.2s, output queue size 6
progress 45% @chr8:56000001, elapsed 0.3s, est remaining 0.4s, peak mem 100MB, user 0.8s, sys 8.1s, output queue size 14
progress 50% @chr9:73000001, elapsed 0.3s, est remaining 0.3s, peak mem 100MB, user 0.9s, sys 9.1s, output queue size 11
progress 55% @chr10:90000001, elapsed 0.4s, est remaining 0.3s, peak mem 100MB, user 1.0s, sys 10.0s, output queue size 11
progress 60% @chr11:122000001, elapsed 0.4s, est remaining 0.3s, peak mem 100MB, user 1.1s, sys 11.0s, output queue size 8
progress 65% @chr13:16000001, elapsed 0.4s, est remaining 0.2s, peak mem 100MB, user 1.1s, sys 12.0s, output queue size 20
progress 70% @chr14:64000001, elapsed 0.5s, est remaining 0.2s, peak mem 100MB, user 1.2s, sys 12.9s, output queue size 3
progress 75% @chr16:12000001, elapsed 0.5s, est remaining 0.2s, peak mem 100MB, user 1.4s, sys 13.7s, output queue size 8
progress 80% @chr18:2000001, elapsed 0.5s, est remaining 0.1s, peak mem 100MB, user 1.5s, sys 14.6s, output queue size 21
progress 85% @chr20:22000001, elapsed 0.6s, est remaining 0.1s, peak mem 100MB, user 1.6s, sys 15.5s, output queue size 6
progress 90% @chrX:35000001, elapsed 0.6s, est remaining 0.1s, peak mem 122MB, user 1.9s, sys 16.2s, output queue size 114
progress 95% @chrY:34000001, elapsed 0.7s, est remaining 0.0s, peak mem 134MB, user 2.2s, sys 17.1s, output queue size 276
progress 100% @chr21:41000001, elapsed 1.1s, est remaining 0.0s, peak mem 163MB, user 3.4s, sys 18.3s, output queue size 3664
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.83
cpu vendor: GenuineIntel
 signature: 000a06d1
  features: 1f8bfbff fffab20b
  extended: f1bf27eb 1b407f7e
  amd bits: 2c100800 00000121
     brand: Intel(R) Xeon(R) 6975P-C
threads: 31 max 192
algo: HsMetricAlgo
license: sentieon:Metrics=31
input file size: 51395954
reads: 1001089
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 1.095 user 9.794 sys 10.905 real
done: 1 calls 0.000 user 0.000 sys 0.003 real
exec_no_coor: 1 calls 0.000 user 0.000 sys 0.000 real
execute: 1 calls 0.002 user 0.001 sys 1.148 real
idle: 77 calls 0.005 user 0.020 sys 43.506 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 171401216 mem 3.691 user 18.999 sys 2.314 real