File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/da/0d29f95c5d5512fa155e3e6bec44a8/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-k21j6r3d because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-05-27 04:59:26,719 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-05-27 04:59:27,503 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-05-27 04:59:27,674 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-05-27 04:59:28,707 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-05-27 04:59:28,896 - cnv_pipe.batch.run_model - INFO - Processing cluster 847 with 135 probes
2026-05-27 04:59:29,265 - cnv_pipe.batch.run_model.cluster847 - INFO - Child process started for cluster 847 with 135 probes
2026-05-27 05:00:10,968 - cnv_pipe.batch.run_model.cluster847 - INFO - Child process finished cluster 847. Wrote cluster_847_samples.csv and cluster_847_params.csv
2026-05-27 05:00:10,968 - cnv_pipe.batch.run_model - INFO - Cluster 847 finished in 42.07 seconds. Status: SUCCESS