File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/78/b280b666a16030dda290b9f706c426/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-60kyk770 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-05-27 04:59:23,930 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-05-27 04:59:24,773 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-05-27 04:59:24,949 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-05-27 04:59:25,937 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-05-27 04:59:26,011 - cnv_pipe.batch.run_model - INFO - Processing cluster 835 with 171 probes
2026-05-27 04:59:26,489 - cnv_pipe.batch.run_model.cluster835 - INFO - Child process started for cluster 835 with 171 probes
2026-05-27 05:00:18,049 - cnv_pipe.batch.run_model.cluster835 - INFO - Child process finished cluster 835. Wrote cluster_835_samples.csv and cluster_835_params.csv
2026-05-27 05:00:18,050 - cnv_pipe.batch.run_model - INFO - Cluster 835 finished in 52.04 seconds. Status: SUCCESS