File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f4/a52b7e362d33d0880799875189c7a1/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-rwp5ptva because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-05-27 04:59:05,907 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-05-27 04:59:06,957 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-05-27 04:59:07,160 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-05-27 04:59:08,726 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-05-27 04:59:08,824 - cnv_pipe.batch.run_model - INFO - Processing cluster 944 with 162 probes
2026-05-27 04:59:09,309 - cnv_pipe.batch.run_model.cluster944 - INFO - Child process started for cluster 944 with 162 probes
2026-05-27 05:00:16,621 - cnv_pipe.batch.run_model.cluster944 - INFO - Child process finished cluster 944. Wrote cluster_944_samples.csv and cluster_944_params.csv
2026-05-27 05:00:16,622 - cnv_pipe.batch.run_model - INFO - Cluster 944 finished in 67.80 seconds. Status: SUCCESS