File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/29/85068548d72c76e6b8172000623f87/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-mle_vmsa because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-05-27 04:59:25,156 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-05-27 04:59:26,010 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-05-27 04:59:26,186 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-05-27 04:59:27,102 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-05-27 04:59:27,274 - cnv_pipe.batch.run_model - INFO - Processing cluster 1127 with 165 probes
2026-05-27 04:59:27,664 - cnv_pipe.batch.run_model.cluster1127 - INFO - Child process started for cluster 1127 with 165 probes
2026-05-27 05:00:17,680 - cnv_pipe.batch.run_model.cluster1127 - INFO - Child process finished cluster 1127. Wrote cluster_1127_samples.csv and cluster_1127_params.csv
2026-05-27 05:00:17,683 - cnv_pipe.batch.run_model - INFO - Cluster 1127 finished in 50.41 seconds. Status: SUCCESS