File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/20/92b6933dc3f24c2f2817c4f58b87b7/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-uwerm49y because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-05-27 04:59:03,792 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-05-27 04:59:04,601 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-05-27 04:59:04,770 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-05-27 04:59:05,688 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-05-27 04:59:05,850 - cnv_pipe.batch.run_model - INFO - Processing cluster 1005 with 197 probes
2026-05-27 04:59:06,235 - cnv_pipe.batch.run_model.cluster1005 - INFO - Child process started for cluster 1005 with 197 probes
2026-05-27 05:00:05,443 - cnv_pipe.batch.run_model.cluster1005 - INFO - Child process finished cluster 1005. Wrote cluster_1005_samples.csv and cluster_1005_params.csv
2026-05-27 05:00:05,444 - cnv_pipe.batch.run_model - INFO - Cluster 1005 finished in 59.59 seconds. Status: SUCCESS