File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6b/613262c30e0d3ae2ac4dbc5b34affc/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-ponikw58 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-05-27 04:59:24,692 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-05-27 04:59:25,507 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-05-27 04:59:25,674 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-05-27 04:59:26,584 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-05-27 04:59:26,741 - cnv_pipe.batch.run_model - INFO - Processing cluster 1126 with 196 probes
2026-05-27 04:59:27,112 - cnv_pipe.batch.run_model.cluster1126 - INFO - Child process started for cluster 1126 with 196 probes
2026-05-27 05:00:25,403 - cnv_pipe.batch.run_model.cluster1126 - INFO - Child process finished cluster 1126. Wrote cluster_1126_samples.csv and cluster_1126_params.csv
2026-05-27 05:00:25,404 - cnv_pipe.batch.run_model - INFO - Cluster 1126 finished in 58.66 seconds. Status: SUCCESS