File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/20/035c35b9388983d3613f989d98fd13/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-i9fjabu0 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-05-27 04:58:59,805 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-05-27 04:59:00,585 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-05-27 04:59:00,751 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-05-27 04:59:01,677 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-05-27 04:59:01,854 - cnv_pipe.batch.run_model - INFO - Processing cluster 939 with 184 probes
2026-05-27 04:59:02,221 - cnv_pipe.batch.run_model.cluster939 - INFO - Child process started for cluster 939 with 184 probes
2026-05-27 04:59:55,951 - cnv_pipe.batch.run_model.cluster939 - INFO - Child process finished cluster 939. Wrote cluster_939_samples.csv and cluster_939_params.csv
2026-05-27 04:59:55,952 - cnv_pipe.batch.run_model - INFO - Cluster 939 finished in 54.10 seconds. Status: SUCCESS