File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/db/c7edbdd4f01910789c166eb09a3f43/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-3hj4k9rr because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-05-27 04:59:22,743 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-05-27 04:59:23,549 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-05-27 04:59:23,718 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-05-27 04:59:24,734 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-05-27 04:59:24,807 - cnv_pipe.batch.run_model - INFO - Processing cluster 1120 with 174 probes
2026-05-27 04:59:25,205 - cnv_pipe.batch.run_model.cluster1120 - INFO - Child process started for cluster 1120 with 174 probes
2026-05-27 05:00:16,895 - cnv_pipe.batch.run_model.cluster1120 - INFO - Child process finished cluster 1120. Wrote cluster_1120_samples.csv and cluster_1120_params.csv
2026-05-27 05:00:16,896 - cnv_pipe.batch.run_model - INFO - Cluster 1120 finished in 52.09 seconds. Status: SUCCESS