[2026-05-27T04:54:40.727155Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Initiating pyFlow run
[2026-05-27T04:54:40.728048Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-05-27T04:54:40.728057Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-05-27T04:54:40.728062Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-05-27T04:54:40.728067Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXVmyWJF'
[2026-05-27T04:54:40.728071Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-05-27T04:54:40.728076Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] [RunParameters] mode: local
[2026-05-27T04:54:40.728080Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-05-27T04:54:40.728084Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] [RunParameters] memMb: 1523736
[2026-05-27T04:54:40.728088Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-05-27T04:54:40.728091Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-05-27T04:54:40.728095Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-05-27T04:54:40.728099Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-05-27T04:54:40.728103Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-05-27T04:54:40.728665Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-05-27T04:54:40.728845Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-05-27T04:54:40.734653Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-05-27T04:54:40.735529Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-05-27T04:54:40.735745Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-05-27T04:54:40.736078Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-05-27T04:54:40.736277Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.736937Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.737229Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.737275Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-05-27T04:54:40.737502Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.737633Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.737714Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.737994Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.738495Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.740253Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.740900Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.741358Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-05-27T04:54:40.741545Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.741682Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.741971Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.742165Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.742281Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.742347Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.742460Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.742526Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.742720Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.742790Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.742904Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.742971Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.743082Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.743154Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.743392Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.743662Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.743777Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.743843Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.743952Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.744053Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.744175Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.744236Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.744346Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.744442Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.744554Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.744619Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.744799Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.744966Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.745425Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.745489Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.745627Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.745691Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.745802Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.745869Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.745991Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.746114Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.746241Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.746315Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.746480Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.746956Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.747076Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.747137Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.747249Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.747323Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.747442Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.747508Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.747617Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.747683Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.747796Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.747859Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.748103Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.748564Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.748695Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.748780Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.748894Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.748959Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.749517Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.749600Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.749834Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.750388Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.750505Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.750571Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.752116Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.752400Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.753029Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.753103Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.753217Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.753287Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.753401Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.753463Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.753581Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.753649Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.753767Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.753835Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.753947Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.754076Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.754247Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.754479Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.755498Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.755596Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.755725Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.755799Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.755925Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.755993Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.756117Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.756182Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.772560Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.773029Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.773226Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:40.773372Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.774532Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.774665Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-05-27T04:54:40.774824Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.775143Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' from sub-workflow 'CallGenome'
[2026-05-27T04:54:40.775523Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.775835Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' from sub-workflow 'CallGenome'
[2026-05-27T04:54:40.776263Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.777026Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' from sub-workflow 'CallGenome'
[2026-05-27T04:54:40.777540Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.778164Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' from sub-workflow 'CallGenome'
[2026-05-27T04:54:40.778311Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-05-27T04:54:40.778976Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' from sub-workflow 'CallGenome'
[2026-05-27T04:54:40.779545Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-05-27T04:54:40.779825Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' from sub-workflow 'CallGenome'
[2026-05-27T04:54:40.781822Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' from sub-workflow 'CallGenome'
[2026-05-27T04:54:40.786523Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0001] Task initiated on local node
[2026-05-27T04:54:40.789409Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0007] Task initiated on local node
[2026-05-27T04:54:40.793232Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0009] Task initiated on local node
[2026-05-27T04:54:40.797395Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0008] Task initiated on local node
[2026-05-27T04:54:40.798246Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0010] Task initiated on local node
[2026-05-27T04:54:40.802512Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0002] Task initiated on local node
[2026-05-27T04:54:40.805659Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0003] Task initiated on local node
[2026-05-27T04:54:40.806889Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0000] Task initiated on local node
[2026-05-27T04:54:40.914767Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:40.914895Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:40.915953Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-05-27T04:54:40.916272Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' from sub-workflow 'CallGenome'
[2026-05-27T04:54:40.920171Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0012] Task initiated on local node
[2026-05-27T04:54:40.921201Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0006] Task initiated on local node
[2026-05-27T04:54:41.031154Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:41.032385Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-05-27T04:54:41.035788Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0002] Task initiated on local node
[2026-05-27T04:54:41.147305Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:41.149524Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' from sub-workflow 'CallGenome'
[2026-05-27T04:54:41.153225Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0001] Task initiated on local node
[2026-05-27T04:54:41.815563Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:41.817019Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' from sub-workflow 'CallGenome'
[2026-05-27T04:54:41.820445Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0000] Task initiated on local node
[2026-05-27T04:54:42.031997Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:42.032087Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:42.033221Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' from sub-workflow 'CallGenome'
[2026-05-27T04:54:42.033588Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-05-27T04:54:42.037544Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0000] Task initiated on local node
[2026-05-27T04:54:42.038454Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0014] Task initiated on local node
[2026-05-27T04:54:42.398613Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:42.398727Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:42.399869Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' from sub-workflow 'CallGenome'
[2026-05-27T04:54:42.400180Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-05-27T04:54:42.403788Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0004] Task initiated on local node
[2026-05-27T04:54:42.404381Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0001] Task initiated on local node
[2026-05-27T04:54:42.615803Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:42.616984Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' from sub-workflow 'CallGenome'
[2026-05-27T04:54:42.620063Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0004] Task initiated on local node
[2026-05-27T04:54:43.082688Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:43.083802Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' from sub-workflow 'CallGenome'
[2026-05-27T04:54:43.086849Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0006] Task initiated on local node
[2026-05-27T04:54:43.147917Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:43.149066Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' from sub-workflow 'CallGenome'
[2026-05-27T04:54:43.152319Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0008] Task initiated on local node
[2026-05-27T04:54:43.213308Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:43.214405Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' from sub-workflow 'CallGenome'
[2026-05-27T04:54:43.217858Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0001] Task initiated on local node
[2026-05-27T04:54:43.246630Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:43.247761Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' from sub-workflow 'CallGenome'
[2026-05-27T04:54:43.251225Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0014] Task initiated on local node
[2026-05-27T04:54:43.312316Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:43.313787Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' from sub-workflow 'CallGenome'
[2026-05-27T04:54:43.317331Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0005] Task initiated on local node
[2026-05-27T04:54:43.330191Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:43.331426Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-05-27T04:54:43.334396Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0001] Task initiated on local node
[2026-05-27T04:54:43.395891Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:43.397543Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-05-27T04:54:43.401031Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0004] Task initiated on local node
[2026-05-27T04:54:43.405802Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:43.406993Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' from sub-workflow 'CallGenome'
[2026-05-27T04:54:43.410160Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0011] Task initiated on local node
[2026-05-27T04:54:43.471418Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:43.472905Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-05-27T04:54:43.476596Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0004] Task initiated on local node
[2026-05-27T04:54:43.505416Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:43.506748Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' from sub-workflow 'CallGenome'
[2026-05-27T04:54:43.510105Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0016] Task initiated on local node
[2026-05-27T04:54:43.510641Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:43.511731Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' from sub-workflow 'CallGenome'
[2026-05-27T04:54:43.514698Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0002] Task initiated on local node
[2026-05-27T04:54:44.428386Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:44.429524Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' from sub-workflow 'CallGenome'
[2026-05-27T04:54:44.432646Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0004] Task initiated on local node
[2026-05-27T04:54:44.493877Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:44.494981Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' from sub-workflow 'CallGenome'
[2026-05-27T04:54:44.498307Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0001] Task initiated on local node
[2026-05-27T04:54:44.760127Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:44.761206Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' from sub-workflow 'CallGenome'
[2026-05-27T04:54:44.765004Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0007] Task initiated on local node
[2026-05-27T04:54:44.875965Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:44.876060Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:44.876105Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:44.877104Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' from sub-workflow 'CallGenome'
[2026-05-27T04:54:44.877430Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' from sub-workflow 'CallGenome'
[2026-05-27T04:54:44.877747Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-05-27T04:54:44.882305Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0002] Task initiated on local node
[2026-05-27T04:54:44.882563Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0005] Task initiated on local node
[2026-05-27T04:54:44.884102Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:44.884947Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0009] Task initiated on local node
[2026-05-27T04:54:44.885387Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' from sub-workflow 'CallGenome'
[2026-05-27T04:54:44.888419Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0003] Task initiated on local node
[2026-05-27T04:54:44.917359Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:44.917447Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:44.917470Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:44.918352Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-05-27T04:54:44.918662Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' from sub-workflow 'CallGenome'
[2026-05-27T04:54:44.919047Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-05-27T04:54:44.923326Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0001] Task initiated on local node
[2026-05-27T04:54:44.924882Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0014] Task initiated on local node
[2026-05-27T04:54:44.925825Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0003] Task initiated on local node
[2026-05-27T04:54:44.952039Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:44.953066Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-05-27T04:54:44.956305Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0006] Task initiated on local node
[2026-05-27T04:54:44.968934Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:44.969818Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' from sub-workflow 'CallGenome'
[2026-05-27T04:54:44.972800Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0003] Task initiated on local node
[2026-05-27T04:54:44.985628Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:44.985704Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:44.986578Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-05-27T04:54:44.986910Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-05-27T04:54:44.990367Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0014] Task initiated on local node
[2026-05-27T04:54:44.991423Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0002] Task initiated on local node
[2026-05-27T04:54:45.019587Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:45.020865Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' from sub-workflow 'CallGenome'
[2026-05-27T04:54:45.023864Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0009] Task initiated on local node
[2026-05-27T04:54:45.024595Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:45.024691Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:45.025536Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' from sub-workflow 'CallGenome'
[2026-05-27T04:54:45.025811Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-05-27T04:54:45.028705Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0001] Task initiated on local node
[2026-05-27T04:54:45.029780Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0012] Task initiated on local node
[2026-05-27T04:54:45.057989Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:45.058097Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:45.058943Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' from sub-workflow 'CallGenome'
[2026-05-27T04:54:45.059250Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' from sub-workflow 'CallGenome'
[2026-05-27T04:54:45.062164Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0000] Task initiated on local node
[2026-05-27T04:54:45.063265Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0000] Task initiated on local node
[2026-05-27T04:54:45.091380Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:45.092250Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-05-27T04:54:45.094240Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:45.095238Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' from sub-workflow 'CallGenome'
[2026-05-27T04:54:45.095667Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0007] Task initiated on local node
[2026-05-27T04:54:45.098433Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0003] Task initiated on local node
[2026-05-27T04:54:45.127540Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:45.127636Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:45.128492Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' from sub-workflow 'CallGenome'
[2026-05-27T04:54:45.128769Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' from sub-workflow 'CallGenome'
[2026-05-27T04:54:45.131825Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0007] Task initiated on local node
[2026-05-27T04:54:45.132638Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:45.133264Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0000] Task initiated on local node
[2026-05-27T04:54:45.133543Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' from sub-workflow 'CallGenome'
[2026-05-27T04:54:45.136485Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0013] Task initiated on local node
[2026-05-27T04:54:45.197986Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:45.198075Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:45.199056Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-05-27T04:54:45.199365Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' from sub-workflow 'CallGenome'
[2026-05-27T04:54:45.202936Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0001] Task initiated on local node
[2026-05-27T04:54:45.204005Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0011] Task initiated on local node
[2026-05-27T04:54:45.263800Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:45.263894Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:45.264604Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-05-27T04:54:45.265135Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' from sub-workflow 'CallGenome'
[2026-05-27T04:54:45.268309Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0011] Task initiated on local node
[2026-05-27T04:54:45.269129Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0010] Task initiated on local node
[2026-05-27T04:54:45.330233Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:45.330364Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:45.331161Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' from sub-workflow 'CallGenome'
[2026-05-27T04:54:45.331795Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' from sub-workflow 'CallGenome'
[2026-05-27T04:54:45.335192Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0002] Task initiated on local node
[2026-05-27T04:54:45.336307Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0002] Task initiated on local node
[2026-05-27T04:54:45.365979Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:45.366820Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-05-27T04:54:45.369955Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0015] Task initiated on local node
[2026-05-27T04:54:45.431223Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:45.431299Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:45.432073Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' from sub-workflow 'CallGenome'
[2026-05-27T04:54:45.432384Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-05-27T04:54:45.436002Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0003] Task initiated on local node
[2026-05-27T04:54:45.436694Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0003] Task initiated on local node
[2026-05-27T04:54:45.497354Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:45.497463Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:45.498269Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' from sub-workflow 'CallGenome'
[2026-05-27T04:54:45.498789Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' from sub-workflow 'CallGenome'
[2026-05-27T04:54:45.502282Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0016] Task initiated on local node
[2026-05-27T04:54:45.503401Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0002] Task initiated on local node
[2026-05-27T04:54:45.532553Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:45.533421Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-05-27T04:54:45.536385Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0009] Task initiated on local node
[2026-05-27T04:54:45.597616Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:45.598362Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-05-27T04:54:45.601307Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0015] Task initiated on local node
[2026-05-27T04:54:45.606011Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:45.606654Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' from sub-workflow 'CallGenome'
[2026-05-27T04:54:45.609310Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0011] Task initiated on local node
[2026-05-27T04:54:45.638825Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:45.638931Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:45.639620Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-05-27T04:54:45.640175Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-05-27T04:54:45.643633Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0008] Task initiated on local node
[2026-05-27T04:54:45.644464Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0000] Task initiated on local node
[2026-05-27T04:54:45.704901Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:45.705650Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' from sub-workflow 'CallGenome'
[2026-05-27T04:54:45.709009Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0005] Task initiated on local node
[2026-05-27T04:54:46.271744Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:46.272460Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' from sub-workflow 'CallGenome'
[2026-05-27T04:54:46.275235Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0002] Task initiated on local node
[2026-05-27T04:54:46.280347Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:46.281012Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' from sub-workflow 'CallGenome'
[2026-05-27T04:54:46.283931Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0004] Task initiated on local node
[2026-05-27T04:54:46.313048Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:46.313773Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-05-27T04:54:46.316724Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0005] Task initiated on local node
[2026-05-27T04:54:46.378008Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:46.378688Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-05-27T04:54:46.381610Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0005] Task initiated on local node
[2026-05-27T04:54:46.442915Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:46.443555Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' from sub-workflow 'CallGenome'
[2026-05-27T04:54:46.446572Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0012] Task initiated on local node
[2026-05-27T04:54:46.959255Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:46.960249Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' from sub-workflow 'CallGenome'
[2026-05-27T04:54:46.963151Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0005] Task initiated on local node
[2026-05-27T04:54:47.024464Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:47.025263Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-05-27T04:54:47.028451Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0010] Task initiated on local node
[2026-05-27T04:54:47.089953Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:47.090671Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' from sub-workflow 'CallGenome'
[2026-05-27T04:54:47.093593Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0015] Task initiated on local node
[2026-05-27T04:54:47.305417Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:47.305515Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:47.306158Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' from sub-workflow 'CallGenome'
[2026-05-27T04:54:47.306493Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' from sub-workflow 'CallGenome'
[2026-05-27T04:54:47.309469Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0003] Task initiated on local node
[2026-05-27T04:54:47.310702Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0004] Task initiated on local node
[2026-05-27T04:54:47.372415Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:47.372526Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:47.373191Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-05-27T04:54:47.373703Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-05-27T04:54:47.376721Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0010] Task initiated on local node
[2026-05-27T04:54:47.377734Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0006] Task initiated on local node
[2026-05-27T04:54:47.405935Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:47.406592Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-05-27T04:54:47.408686Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:47.409416Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-05-27T04:54:47.409819Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0008] Task initiated on local node
[2026-05-27T04:54:47.412544Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0013] Task initiated on local node
[2026-05-27T04:54:47.441569Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:47.442198Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' from sub-workflow 'CallGenome'
[2026-05-27T04:54:47.445466Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0001] Task initiated on local node
[2026-05-27T04:54:47.474177Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:47.474271Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:47.474899Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' from sub-workflow 'CallGenome'
[2026-05-27T04:54:47.475274Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-05-27T04:54:47.478181Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0013] Task initiated on local node
[2026-05-27T04:54:47.479340Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0000] Task initiated on local node
[2026-05-27T04:54:47.539682Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:47.539783Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:47.540356Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' from sub-workflow 'CallGenome'
[2026-05-27T04:54:47.540648Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' from sub-workflow 'CallGenome'
[2026-05-27T04:54:47.543681Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0003] Task initiated on local node
[2026-05-27T04:54:47.544575Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0013] Task initiated on local node
[2026-05-27T04:54:47.556816Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:47.557406Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' from sub-workflow 'CallGenome'
[2026-05-27T04:54:47.560219Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0002] Task initiated on local node
[2026-05-27T04:54:47.589380Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:47.589451Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:47.589989Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-05-27T04:54:47.592896Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_002_chr3_0000] Task initiated on local node
[2026-05-27T04:54:47.593657Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:47.657829Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:47.658344Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-05-27T04:54:47.661159Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0000] Task initiated on local node
[2026-05-27T04:54:47.722676Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:47.787284Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:47.787928Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' from sub-workflow 'CallGenome'
[2026-05-27T04:54:47.790895Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0012] Task initiated on local node
[2026-05-27T04:54:47.819879Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:47.934183Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:47.934745Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-05-27T04:54:47.937579Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0000] Task initiated on local node
[2026-05-27T04:54:47.966720Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:48.482274Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:48.482795Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' from sub-workflow 'CallGenome'
[2026-05-27T04:54:48.485362Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0015] Task initiated on local node
[2026-05-27T04:54:48.514989Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:48.929884Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:48.930371Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' from sub-workflow 'CallGenome'
[2026-05-27T04:54:48.932565Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0004] Task initiated on local node
[2026-05-27T04:54:48.994410Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:53.920121Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:53.920621Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' from sub-workflow 'CallGenome'
[2026-05-27T04:54:53.923382Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0003] Task initiated on local node
[2026-05-27T04:54:53.952576Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:53.952928Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:53.953067Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-05-27T04:54:53.953287Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-05-27T04:54:53.953531Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-05-27T04:54:53.958119Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-05-27T04:54:53.959212Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-05-27T04:54:53.960036Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-05-27T04:54:53.986190Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:53.986256Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:53.986279Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:53.986477Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-05-27T04:54:53.987869Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-05-27T04:54:53.988721Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-05-27T04:54:53.990570Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-05-27T04:54:54.019994Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:54.020051Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:54.020212Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-05-27T04:54:54.022702Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-05-27T04:54:54.052414Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:59.718487Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-05-27T04:55:13.847648Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-05-27T04:55:13.847648Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] 
[2026-05-27T04:55:13.847648Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-05-27T04:55:13.847716Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] 
[2026-05-27T04:55:13.847723Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-05-27T04:55:13.847730Z] [nf-48be914f662c89a644c666d5bae1f39b-cb43d-zfvnb] [616_1] [WorkflowRunner] Elapsed time for full workflow: 33 sec