File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f9/a9d5b11e05058bbc6c3a2095f9e622/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-e5jr9x76 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-05-27 04:58:21,132 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-05-27 04:58:21,913 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-05-27 04:58:22,079 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-05-27 04:58:23,025 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-05-27 04:58:23,211 - cnv_pipe.batch.run_model - INFO - Processing cluster 703 with 178 probes
2026-05-27 04:58:23,583 - cnv_pipe.batch.run_model.cluster703 - INFO - Child process started for cluster 703 with 178 probes
2026-05-27 04:59:16,591 - cnv_pipe.batch.run_model.cluster703 - INFO - Child process finished cluster 703. Wrote cluster_703_samples.csv and cluster_703_params.csv
2026-05-27 04:59:16,592 - cnv_pipe.batch.run_model - INFO - Cluster 703 finished in 53.38 seconds. Status: SUCCESS