File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/31/4963e2d8f65070f7a5308578f65f76/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-spsc_r5i because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-05-27 04:58:34,379 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-05-27 04:58:35,179 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-05-27 04:58:35,347 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-05-27 04:58:36,283 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-05-27 04:58:36,456 - cnv_pipe.batch.run_model - INFO - Processing cluster 830 with 164 probes
2026-05-27 04:58:36,824 - cnv_pipe.batch.run_model.cluster830 - INFO - Child process started for cluster 830 with 164 probes
2026-05-27 04:59:26,457 - cnv_pipe.batch.run_model.cluster830 - INFO - Child process finished cluster 830. Wrote cluster_830_samples.csv and cluster_830_params.csv
2026-05-27 04:59:26,457 - cnv_pipe.batch.run_model - INFO - Cluster 830 finished in 50.00 seconds. Status: SUCCESS