Clear
Retried
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQ_ALIGN_STAR:SAMTOOLS_INDEX_STAR_ALIGNMENT (rna_s1200_S21) 1m 6s 2s 47s 17s 88.4 MB 177% 6.8 GB 5.5 MB 6.8 GB 5.5 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_INFEREXPERIMENT (rna_s1200_S21) 28s 8s 1s 19s 78.3 MB 1637% 58.2 MB 842 bytes 52.6 MB 12.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_INNERDISTANCE (rna_s1200_S21) 53s 8s 27s 18s 914.8 MB 232% 153.7 MB 60.4 MB 105.5 MB 60.4 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:PICARD_COLLECTINSERTSIZEMETRICS (rna_s1200_S21) 3m 34s 14s 2m 59s 21s 358.0 MB 117% 6.8 GB 1016.8 KB 6.8 GB 996.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:ARRIBA_WORKFLOW:ARRIBA (rna_s1200_S21) 4m 49s 23s 4m 8s 18s 7.5 GB 100% 11.0 GB 362.9 MB 0 bytes 362.9 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:SAMTOOLS_VIEW_ALIGNMENT_CRAM (rna_s1200_S21) 2m 56s 2s 2m 17s 37s 789.0 MB 310% 15.6 GB 2.4 GB 15.6 GB 2.4 GB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:ARRIBA_WORKFLOW:ARRIBA_FILTER_SAME_GENE (rna_s1200_S21) 6s 5s - - 0 bytes 74% 209.4 KB 98.0 KB 0 bytes 108.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:SAMTOOLS_INDEX_ALIGNMENT_CRAM (rna_s1200_S21) 10s 2s 1s 7s 7.4 MB 99% 2.4 GB 346.0 KB 0 bytes 352.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_JUNCTIONANNOTATION (rna_s1200_S21) 5m 44s 9s 5m 16s 19s 151.2 MB 112% 6.9 GB 85.6 MB 6.6 GB 85.6 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_BAMSTAT (rna_s1200_S21) 7m 40s 9s 7m 14s 17s 53.1 MB 107% 6.8 GB 1.4 KB 6.6 GB 12.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_JUNCTIONSATURATION (rna_s1200_S21) 7m 41s 1s 7m 23s 17s 10.0 GB 108% 6.8 GB 28.3 KB 0 bytes 40.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:STARFUSION_WORKFLOW:STARFUSION (rna_s1200_S21) 10m 47s 29s 8m 47s 1m 30s 6.0 GB 540% 46.8 GB 4.5 GB 2.9 GB 4.5 GB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:RNA_CONTAMINATION_DETECTION_WORKFLOW:NGSCheckMATE (rna_s1200_S21) 8m 41s 13s 8m 9s 19s 3.1 MB 106% 12.6 GB 3.9 MB 10.7 GB 2.0 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_READDUPLICATION (rna_s1200_S21) 9m 44s 2s 9m 23s 19s 13.8 GB 107% 6.8 GB 724.2 KB 27.1 MB 740.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:RNA_CONTAMINATION_DETECTION_WORKFLOW:EXTRACT_VAF_FEATURES (rna_s1200_S21) 5s 4s 0s 0s 13.0 MB 4565% 6.2 MB 705 bytes 0 bytes 8.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:CTATSPLICING_STARTOCANCERINTRONS (rna_s1200_S21) 8m 59s 12s 7m 36s 1m 10s 1.4 GB 111% 8.2 GB 3.2 GB 5.0 GB 3.2 GB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_READDISTRIBUTION (rna_s1200_S21) 10m 7s 9s 9m 41s 17s 1.1 GB 105% 7.1 GB 1.7 KB 6.8 GB 12.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:RNA_CONTAMINATION_DETECTION_WORKFLOW:PREDICT_CONTAMINATION (rna_s1200_S21) 4s 2s 0s 1s 15.5 MB 102% 929.0 KB 882 bytes 0 bytes 8.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:STARFUSION_WORKFLOW:STARFUSION_FILTER (rna_s1200_S21) 1m 56s 4s 1m 48s 3s 7.9 GB 115% 84.7 MB 765.7 KB 0 bytes 776.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:CANCER_INTRONS_TO_VCF (rna_s1200_S21) 6s 4s - - 15.3 MB 96% 1.3 MB 189.1 KB 0 bytes 200.0 KB 1
40 items found |
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