Clear
Retried
succeeded NFCORE_RNAFUSION:RNAFUSION:TRIM_WORKFLOW:FASTP (rna_s1200_S21) 3m 56s 2s 3m 0s 54s 3.4 GB 1046% 11.0 GB 10.9 GB 3.9 GB 10.9 GB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQC (rna_s1200_S21) 10m 38s 1s 9m 59s 38s 596.3 MB 199% 10.9 GB 4.0 MB 10.9 GB 4.3 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:TRIM_WORKFLOW:FASTQC_FOR_FASTP (rna_s1200_S21) 9m 14s 5s 8m 51s 18s 516.0 MB 195% 10.9 GB 4.0 MB 10.9 GB 4.3 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:KALLISTO_QUANT (rna_s1200_S21) 10m 5s 1s 9m 49s 15s 1.4 GB 374% 11.2 GB 12.6 MB 11.2 GB 12.6 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:KALLISTO_TO_TX2GENE_QC (rna_s1200_S21) 3s 1s 1s 1s 15.6 MB 1343% 44.6 MB 1.3 MB 0 bytes 1.3 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:KALLISTO_TO_MULTIQC (rna_s1200_S21) 3s 1s 0s 1s 18.6 MB 4256% 4.6 MB 3.4 KB 0 bytes 8.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQ_ALIGN_STAR:STAR_ALIGNMENT (rna_s1200_S21) 29m 23s 2s 27m 52s 1m 29s 42.1 GB 2041% 236.5 GB 83.0 GB 77.0 GB 82.9 GB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQ_ALIGN_STAR:SAMTOOLS_INDEX_STAR_ALIGNMENT (rna_s1200_S21) 1m 7s 1s 47s 19s 88.1 MB 178% 6.8 GB 5.5 MB 6.8 GB 5.5 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:PICARD_COLLECTINSERTSIZEMETRICS (rna_s1200_S21) 2m 57s 1s 2m 30s 26s 477.8 MB 112% 6.8 GB 1016.8 KB 6.7 GB 996.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:STARFUSION_WORKFLOW:STARFUSION (rna_s1200_S21) 1m 15s 2s 7s 1m 5s 2.9 GB 268% 217.0 MB 16.2 KB 55.6 MB 96.0 KB 2
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:PRESEQ_LCEXTRAP (rna_s1200_S21) 14m 28s 1s 14m 9s 18s 1.9 GB 100% 6.8 GB 473.4 KB 0 bytes 468.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES (rna_s1200_S21) 14m 52s 15s 13m 57s 40s 61.5 GB 157% 13.6 GB 8.0 GB 0 bytes 8.0 GB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_INNERDISTANCE (rna_s1200_S21) 49s 2s 28s 19s 917.5 MB 235% 153.7 MB 60.4 MB 117.4 MB 60.4 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_JUNCTIONANNOTATION (rna_s1200_S21) 5m 48s 1s 5m 26s 21s 150.9 MB 111% 6.9 GB 85.6 MB 6.7 GB 85.6 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_BAMSTAT (rna_s1200_S21) 6m 10s 1s 5m 51s 18s 53.0 MB 107% 6.8 GB 1.4 KB 6.8 GB 12.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:RNA_CONTAMINATION_DETECTION_WORKFLOW:NGSCheckMATE (rna_s1200_S21) 7m 41s 8s 7m 16s 17s 3.1 MB 105% 12.6 GB 3.9 MB 4.8 GB 2.0 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_READDISTRIBUTION (rna_s1200_S21) 8m 5s 1s 7m 45s 19s 1.1 GB 106% 7.1 GB 1.7 KB 6.8 GB 12.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:CTATSPLICING_STARTOCANCERINTRONS (rna_s1200_S21) 8m 52s 9s 7m 39s 1m 3s 1.4 GB 111% 7.8 GB 3.2 GB 5.2 GB 3.2 GB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:PICARD_COLLECTRNASEQMETRICS (rna_s1200_S21) 43m 39s 1s 43m 20s 18s 2.9 GB 100% 6.9 GB 746.3 KB 6.8 GB 700.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_INFEREXPERIMENT (rna_s1200_S21) 21s 1s 2s 18s 78.3 MB 1553% 58.2 MB 839 bytes 44.1 MB 12.0 KB 1
40 items found |
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