Clear
Retried
succeeded NFCORE_RNAFUSION:DEMUX_FROM_RUNDIR:DEMULTIPLEX:CAT_FASTQ (rna_s1200_S21) 9s 2s 0s 6s 3.9 MB 73% 1.4 GB 1.4 GB 12.0 KB 1.0 GB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:TRIM_WORKFLOW:FASTP (rna_s1200_S21) 32s 1s 25s 6s 2.8 GB 874% 1.4 GB 1.2 GB 0 bytes 1.2 GB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQC (rna_s1200_S21) 1m 5s 1s 58s 6s 507.6 MB 199% 1.4 GB 3.5 MB 0 bytes 3.8 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:TRIM_WORKFLOW:FASTQC_FOR_FASTP (rna_s1200_S21) 1m 7s 1s 1m 2s 4s 514.0 MB 196% 1.3 GB 3.5 MB 0 bytes 3.8 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:KALLISTO_QUANT (rna_s1200_S21) 2m 7s 4s 1m 57s 6s 1.4 GB 276% 1.6 GB 12.0 MB 1.5 GB 12.0 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQ_ALIGN_STAR:STAR_ALIGNMENT (rna_s1200_S21) 4m 9s 1s 3m 6s 1m 2s 35.5 GB 951% 45.3 GB 9.0 GB 6.4 GB 8.9 GB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:KALLISTO_TO_TX2GENE_QC (rna_s1200_S21) 5s 2s 1s 2s 225.6 MB 1287% 44.3 MB 1.3 MB 0 bytes 1.3 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:KALLISTO_TO_MULTIQC (rna_s1200_S21) 3s 1s 0s 1s 12.9 MB 1940% 4.6 MB 3.4 KB 0 bytes 8.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQ_ALIGN_STAR:SAMTOOLS_INDEX_STAR_ALIGNMENT (rna_s1200_S21) 11s 1s 5s 5s 23.5 MB 168% 853.7 MB 2.4 MB 0 bytes 2.4 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:PICARD_COLLECTINSERTSIZEMETRICS (rna_s1200_S21) 24s 1s 18s 5s 505.3 MB 214% 886.6 MB 975.4 KB 0 bytes 984.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:ARRIBA_WORKFLOW:ARRIBA (rna_s1200_S21) 53s 1s 42s 10s 4.4 GB 101% 5.0 GB 44.6 MB 0 bytes 44.6 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES (rna_s1200_S21) 1m 46s 1s 1m 33s 12s 41.0 GB 163% 1.8 GB 981.1 MB 0 bytes 981.2 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:ARRIBA_WORKFLOW:ARRIBA_FILTER (rna_s1200_S21) 3s 1s 0s 1s 14.7 MB 1981% 38.7 MB 115.7 KB 0 bytes 132.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:STARFUSION_WORKFLOW:STARFUSION (rna_s1200_S21) 2m 58s 1s 1m 52s 1m 4s 3.0 GB 287% 4.9 GB 446.4 MB 598.0 MB 446.3 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_BAMSTAT (rna_s1200_S21) 41s 1s 36s 4s 47.6 MB 166% 872.9 MB 1.3 KB 0 bytes 12.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_JUNCTIONSATURATION (rna_s1200_S21) 52s 1s 47s 4s 1.1 GB 179% 906.5 MB 28.0 KB 0 bytes 40.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:CONTAMINATION_SKIPPED_LOW_READS (rna_s1200_S21) 3s 2s 0s 0s 0 bytes 97% 71.8 KB 950 bytes 0 bytes 12.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_JUNCTIONANNOTATION (rna_s1200_S21) 42s 1s 35s 6s 128.8 MB 202% 919.7 MB 52.5 MB 0 bytes 52.5 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_INNERDISTANCE (rna_s1200_S21) 36s 1s 29s 6s 911.7 MB 213% 176.9 MB 69.3 MB 0 bytes 69.3 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:SAMTOOLS_VIEW_ALIGNMENT_CRAM (rna_s1200_S21) 45s 1s 30s 14s 775.6 MB 214% 9.6 GB 261.4 MB 9.6 GB 261.4 MB 1
38 items found |
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