Clear
Retried
succeeded NFCORE_RNAFUSION:DEMUX_FROM_RUNDIR:DEMULTIPLEX:CAT_FASTQ (rna_s1200_S21) 13s 3s 1s 8s 3.7 MB 38% 1.4 GB 1.4 GB 12.0 KB 1.0 GB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:TRIM_WORKFLOW:FASTQC_FOR_FASTP (rna_s1200_S21) 1m 26s 11s 1m 11s 4s 540.8 MB 199% 1.3 GB 3.5 MB 0 bytes 3.8 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQ_ALIGN_STAR:STAR_ALIGNMENT (rna_s1200_S21) 4m 35s 2s 3m 0s 1m 33s 35.6 GB 1061% 45.3 GB 9.0 GB 8.1 GB 8.9 GB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:TRIM_WORKFLOW:FASTP (rna_s1200_S21) 39s 3s 26s 10s 2.8 GB 899% 1.4 GB 1.2 GB 0 bytes 1.2 GB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQC (rna_s1200_S21) 1m 44s 16s 1m 22s 6s 510.6 MB 199% 1.4 GB 3.5 MB 0 bytes 3.8 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:KALLISTO_QUANT (rna_s1200_S21) 2m 43s 4s 2m 30s 9s 1.4 GB 262% 1.6 GB 11.9 MB 1.5 GB 12.0 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:KALLISTO_TO_TX2GENE_QC (rna_s1200_S21) 5s 1s 1s 3s 203.0 MB 377% 44.3 MB 1.3 MB 0 bytes 1.3 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQ_ALIGN_STAR:SAMTOOLS_INDEX_STAR_ALIGNMENT (rna_s1200_S21) 12s 2s 5s 5s 23.5 MB 162% 853.8 MB 2.4 MB 0 bytes 2.4 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:KALLISTO_TO_MULTIQC (rna_s1200_S21) 4s 3s 0s 0s 18.7 MB 4563% 4.6 MB 3.4 KB 0 bytes 8.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:PICARD_COLLECTINSERTSIZEMETRICS (rna_s1200_S21) 36s 13s 18s 5s 671.2 MB 238% 886.7 MB 975.4 KB 4.0 KB 984.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:ARRIBA_WORKFLOW:ARRIBA (rna_s1200_S21) 1m 29s 2s 1m 13s 14s 4.4 GB 100% 5.0 GB 44.6 MB 0 bytes 44.6 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:PRESEQ_LCEXTRAP (rna_s1200_S21) 1m 37s 2s 1m 31s 4s 203.1 MB 100% 853.8 MB 452.8 KB 0 bytes 460.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES (rna_s1200_S21) 2m 47s 17s 2m 12s 18s 44.6 GB 162% 1.8 GB 981.1 MB 0 bytes 981.3 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:STARFUSION_WORKFLOW:STARFUSION (rna_s1200_S21) 3m 47s 27s 1m 51s 1m 28s 3.0 GB 280% 4.9 GB 446.4 MB 656.2 MB 446.3 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_INFEREXPERIMENT (rna_s1200_S21) 19s 12s 3s 4s 72.1 MB 422% 55.7 MB 827 bytes 0 bytes 12.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_BAMSTAT (rna_s1200_S21) 1m 24s 13s 1m 8s 3s 49.0 MB 113% 872.9 MB 1.3 KB 0 bytes 12.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_READDISTRIBUTION (rna_s1200_S21) 1m 37s 8s 1m 24s 5s 1.1 GB 114% 1.1 GB 1.7 KB 0 bytes 12.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:SAMTOOLS_VIEW_ALIGNMENT_CRAM (rna_s1200_S21) 1m 11s 4s 52s 15s 785.5 MB 226% 9.6 GB 261.5 MB 8.1 GB 261.8 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_JUNCTIONSATURATION (rna_s1200_S21) 1m 2s 9s 50s 3s 1.1 GB 132% 906.6 MB 28.0 KB 0 bytes 40.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_INNERDISTANCE (rna_s1200_S21) 1m 13s 12s 57s 4s 913.6 MB 120% 176.9 MB 69.3 MB 0 bytes 71.2 MB 1
38 items found |
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