| succeeded | COPY_INPUT_TO_OUTDIR (copy_input) | 11s | 9s | - | - | 3.2 MB | 96% | 76.4 KB | 819 bytes | 0 bytes | 16.0 KB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:ARRIBA_WORKFLOW:ARRIBA_FILTER (rna_s1221_S42) | 9s | 6s | 1s | 1s | 14.7 MB | 746% | 38.7 MB | 68.3 KB | 0 bytes | 88.0 KB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:ARRIBA_WORKFLOW:ARRIBA (rna_s1221_S42) | 1m 50s | 33s | 47s | 30s | 4.1 GB | 100% | 4.3 GB | 738.6 KB | 0 bytes | 728.0 KB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:CANCER_INTRONS_TO_VCF (rna_s1221_S42) | 9s | 7s | - | - | 13.9 MB | 101% | 1.1 MB | 3.1 KB | 0 bytes | 12.0 KB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:CONTAMINATION_SKIPPED_LOW_READS (rna_s1221_S42) | 6s | 5s | 0s | 0s | 0 bytes | 101% | 74.5 KB | 945 bytes | 0 bytes | 12.0 KB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:CTATSPLICING_STARTOCANCERINTRONS (rna_s1221_S42) | 1m 45s | 15s | 5s | 1m 24s | 452.7 MB | 230% | 71.3 MB | 2.0 MB | 58.0 MB | 2.0 MB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:FASTQ_ALIGN_STAR:SAMTOOLS_INDEX_STAR_ALIGNMENT (rna_s1221_S42) | 7s | 5s | - | - | 7.8 MB | 139% | 14.0 MB | 1.6 MB | 0 bytes | 1.6 MB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:FASTQ_ALIGN_STAR:STAR_ALIGNMENT (rna_s1221_S42) | 6m 39s | 5s | 4m 28s | 2m 6s | 40.4 GB | 120% | 30.9 GB | 249.6 MB | 0 bytes | 248.4 MB | 2 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:FASTQC (rna_s1221_S42) | 22s | 13s | 7s | 2s | 706.8 MB | 229% | 24.3 MB | 4.2 MB | 0 bytes | 4.5 MB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:FUSIONREPORT_WORKFLOW:FUSIONREPORT (rna_s1221_S42) | 18s | 13s | 1s | 3s | 128.0 MB | 452% | 48.6 MB | 2.2 MB | 0 bytes | 2.2 MB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:GTF2BED (ref_annot.gtf) | 43s | 4s | 29s | 10s | 3.1 GB | 100% | 1.3 GB | 27.7 MB | 4.0 KB | 27.7 MB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:KALLISTO_INDEX (Homo_sapiens.GRCh38.102.cdna.all.fa.gz) | 4m 42s | 4s | 4m 32s | 6s | 2.7 GB | 177% | 1.7 GB | 605.9 MB | 0 bytes | 606.0 MB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:KALLISTO_QUANT (rna_s1221_S42) | 37s | 5s | 20s | 12s | 1.3 GB | 209% | 359.4 MB | 10.3 MB | 247.0 MB | 10.4 MB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:KALLISTO_TO_MULTIQC (rna_s1221_S42) | 9s | 7s | 0s | 1s | 22.1 MB | 1262% | 4.6 MB | 3.4 KB | 0 bytes | 8.0 KB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:KALLISTO_TO_TX2GENE_QC (rna_s1221_S42) | 12s | 8s | 2s | 2s | 179.3 MB | 312% | 43.6 MB | 1.2 MB | 0 bytes | 1.2 MB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:MULTIQC | 36s | 25s | 6s | 4s | 117.8 MB | 206% | 71.1 MB | 22.6 MB | 0 bytes | 22.9 MB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:MULTIQC_EXTRACT_CONTROLS (multiqc_data) | 5s | 4s | 0s | 0s | 12.6 MB | 114% | 1.3 MB | 1.4 KB | 0 bytes | 8.0 KB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:MULTIQC_GENERAL_STATS_TXT_TO_JSON (multiqc_data) | 6s | 4s | 0s | 1s | 13.7 MB | 102% | 1.1 MB | 35.8 KB | 0 bytes | 40.0 KB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:MULTIQC_GENERAL_STATS_TXT_TO_TSV (multiqc_data) | 7s | 5s | 0s | 1s | 14.5 MB | 114% | 1.3 MB | 3.2 KB | 0 bytes | 8.0 KB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_BAMSTAT (rna_s1221_S42) | 18s | 13s | 2s | 3s | 47.3 MB | 339% | 32.4 MB | 1.3 KB | 0 bytes | 12.0 KB | 1 |