Clear
Retried
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:PRESEQ_TO_MULTIQC (rna_s1200_S21) 2s 1s 0s 0s 14.1 MB 86% 1.5 MB 1.2 KB 1.6 MB 8.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:ARRIBA_WORKFLOW:ARRIBA_FILTER (rna_s1200_S21) 4s 1s 0s 2s 15.1 MB 1956% 38.7 MB 126.5 KB 0 bytes 144.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_WHOLE_BAM_SATURATION (rna_s1200_S21) 5s 1s 0s 3s 17.8 MB 101% 26.0 MB 2.8 MB 0 bytes 2.8 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_TO_MULTIQC (rna_s1200_S21) 3s 1s 0s 1s 15.9 MB 3744% 4.1 MB 5.7 KB 0 bytes 12.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_QC (rna_s1200_S21) 1m 27s 1s 1m 6s 19s 7.0 GB 404% 10.1 GB 699.2 MB 663.7 MB 83.4 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:SAMTOOLS_INDEX_ALIGNMENT_CRAM (rna_s1200_S21) 4s 1s - - 7.5 MB 94% 261.5 MB 41.9 KB 0 bytes 48.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:RSEQC_TO_MULTIQC (rna_s1200_S21) 4s 3s 0s 0s 15.2 MB 74% 1.2 MB 1.1 KB 0 bytes 8.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:STARFUSION_WORKFLOW:STARFUSION_FILTER (rna_s1200_S21) 2m 0s 1s 1m 56s 2s 7.9 GB 114% 94.6 MB 265.4 KB 0 bytes 272.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONREPORT_WORKFLOW:FUSIONREPORT (rna_s1200_S21) 5s 1s 1s 2s 128.1 MB 771% 59.8 MB 13.7 MB 0 bytes 13.7 MB 1
succeeded NFCORE_RNAFUSION:DEMUX_FROM_RUNDIR:DEMULTIPLEX:CAT_FASTQ (rna_s1200_S21) 10s 1s 0s 8s 3.9 MB 100% 1.4 GB 1.4 GB 16.0 KB 1.0 GB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:TRIM_WORKFLOW:FASTP (rna_s1200_S21) 32s 1s 23s 8s 2.8 GB 859% 1.4 GB 1.2 GB 0 bytes 1.2 GB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQC (rna_s1200_S21) 1m 2s 1s 57s 4s 545.0 MB 197% 1.4 GB 3.5 MB 0 bytes 3.8 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:TRIM_WORKFLOW:FASTQC_FOR_FASTP (rna_s1200_S21) 1m 9s 1s 1m 2s 6s 603.8 MB 198% 1.3 GB 3.5 MB 0 bytes 3.8 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQ_ALIGN_STAR:STAR_ALIGNMENT (rna_s1200_S21) 4m 22s 1s 2m 59s 1m 22s 35.5 GB 979% 45.3 GB 9.0 GB 9.2 GB 8.9 GB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:KALLISTO_QUANT (rna_s1200_S21) 2m 6s 1s 2m 0s 5s 1.4 GB 271% 1.6 GB 12.0 MB 1.5 GB 12.0 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:PICARD_COLLECTINSERTSIZEMETRICS (rna_s1200_S21) 37s 14s 18s 5s 584.0 MB 212% 886.6 MB 975.4 KB 0 bytes 984.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:KALLISTO_TO_TX2GENE_QC (rna_s1200_S21) 4s 1s 1s 2s 225.6 MB 1051% 44.3 MB 1.3 MB 0 bytes 1.3 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:KALLISTO_TO_MULTIQC (rna_s1200_S21) 2s 1s 0s 0s 21.2 MB 4236% 4.7 MB 3.7 KB 0 bytes 8.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:PRESEQ_LCEXTRAP (rna_s1200_S21) 1m 26s 2s 1m 19s 5s 204.2 MB 100% 853.8 MB 452.8 KB 0 bytes 460.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES (rna_s1200_S21) 1m 49s 1s 1m 35s 13s 34.5 GB 160% 1.8 GB 981.2 MB 0 bytes 981.6 MB 1
39 items found |
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