Clear
Retried
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_READDUPLICATION (rna_s1200_S21) 1m 7s 1s 1m 1s 5s 3.3 GB 162% 878.9 MB 149.0 KB 696.0 KB 164.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:CANCER_INTRONS_TO_VCF (rna_s1200_S21) 3s 1s - - 15.2 MB 79% 1.1 MB 5.5 KB 0 bytes 16.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_WHOLE_BAM_SATURATION (rna_s1200_S21) 5s 1s 0s 3s 17.8 MB 99% 26.0 MB 2.8 MB 0 bytes 2.8 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_QC (rna_s1200_S21) 1m 27s 1s 1m 7s 18s 7.3 GB 400% 10.1 GB 699.2 MB 609.8 MB 83.4 MB 1
succeeded NFCORE_RNAFUSION:DEMUX_FROM_RUNDIR:DEMULTIPLEX:CAT_FASTQ (rna_s1200_S21) 11s 1s 0s 9s 3.9 MB 64% 1.4 GB 1.4 GB 12.0 KB 1.0 GB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQC (rna_s1200_S21) 1m 4s 1s 57s 6s 535.5 MB 196% 1.4 GB 3.5 MB 0 bytes 3.8 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:TRIM_WORKFLOW:FASTP (rna_s1200_S21) 30s 1s 23s 6s 2.7 GB 870% 1.4 GB 1.2 GB 2.2 MB 1.2 GB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:TRIM_WORKFLOW:FASTQC_FOR_FASTP (rna_s1200_S21) 1m 6s 1s 1m 1s 4s 536.6 MB 198% 1.3 GB 3.5 MB 12.0 KB 3.8 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQ_ALIGN_STAR:STAR_ALIGNMENT (rna_s1200_S21) 4m 42s 1s 3m 4s 1m 37s 35.5 GB 964% 45.3 GB 9.0 GB 8.3 GB 8.9 GB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:KALLISTO_QUANT (rna_s1200_S21) 2m 9s 1s 2m 0s 8s 1.4 GB 272% 1.6 GB 12.0 MB 1.6 GB 12.0 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:KALLISTO_TO_TX2GENE_QC (rna_s1200_S21) 4s 1s 1s 2s 16.9 MB 1324% 44.3 MB 1.3 MB 0 bytes 1.3 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:KALLISTO_TO_MULTIQC (rna_s1200_S21) 3s 2s 0s 0s 17.6 MB 4071% 4.7 MB 3.4 KB 0 bytes 8.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:PRESEQ_TO_MULTIQC (rna_s1200_S21) 4s 3s 0s 0s 14.8 MB 96% 1.6 MB 1.2 KB 0 bytes 8.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQ_ALIGN_STAR:SAMTOOLS_INDEX_STAR_ALIGNMENT (rna_s1200_S21) 11s 1s 5s 5s 23.7 MB 162% 853.8 MB 2.4 MB 0 bytes 2.4 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:PICARD_COLLECTINSERTSIZEMETRICS (rna_s1200_S21) 26s 1s 19s 6s 537.5 MB 220% 886.6 MB 975.4 KB 0 bytes 984.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:ARRIBA_WORKFLOW:ARRIBA (rna_s1200_S21) 54s 1s 42s 11s 4.4 GB 102% 5.1 GB 43.4 MB 12.0 KB 43.4 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:PRESEQ_LCEXTRAP (rna_s1200_S21) 1m 21s 1s 1m 17s 3s 202.4 MB 100% 853.8 MB 452.8 KB 0 bytes 460.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:SAMTOOLS_VIEW_ALIGNMENT_CRAM (rna_s1200_S21) 49s 2s 29s 18s 777.3 MB 213% 9.6 GB 261.3 MB 6.9 GB 261.3 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:ARRIBA_WORKFLOW:ARRIBA_FILTER (rna_s1200_S21) 4s 1s 0s 2s 15.0 MB 2103% 38.7 MB 126.5 KB 0 bytes 144.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES (rna_s1200_S21) 1m 56s 1s 1m 41s 14s 34.5 GB 158% 1.8 GB 981.2 MB 0 bytes 981.2 MB 1
38 items found |
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