Clear
Retried
succeeded NFCORE_RNAFUSION:DEMUX_FROM_RUNDIR:DEMULTIPLEX:CAT_FASTQ (rna_s1200_S21) 15s 2s 0s 12s 3.8 MB 104% 1.4 GB 1.4 GB 12.0 KB 1.0 GB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQC (rna_s1200_S21) 1m 24s 10s 1m 9s 5s 477.1 MB 202% 1.4 GB 3.5 MB 0 bytes 3.8 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:TRIM_WORKFLOW:FASTP (rna_s1200_S21) 1m 42s 53s 37s 12s 2.9 GB 910% 1.4 GB 1.2 GB 0 bytes 1.2 GB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:TRIM_WORKFLOW:FASTQC_FOR_FASTP (rna_s1200_S21) 1m 53s 26s 1m 21s 6s 568.1 MB 202% 1.3 GB 3.5 MB 0 bytes 3.8 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:KALLISTO_QUANT (rna_s1200_S21) 2m 21s 39s 1m 33s 9s 1.4 GB 300% 1.6 GB 12.0 MB 1.5 GB 12.0 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:KALLISTO_TO_TX2GENE_QC (rna_s1200_S21) 9s 6s 1s 2s 226.6 MB 805% 44.3 MB 1.3 MB 0 bytes 1.3 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:KALLISTO_TO_MULTIQC (rna_s1200_S21) 5s 4s 0s 0s 12.5 MB 1669% 4.6 MB 3.7 KB 0 bytes 8.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQ_ALIGN_STAR:STAR_ALIGNMENT (rna_s1200_S21) 5m 20s 38s 3m 6s 1m 36s 35.6 GB 1174% 45.3 GB 9.0 GB 2.8 GB 8.9 GB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQ_ALIGN_STAR:SAMTOOLS_INDEX_STAR_ALIGNMENT (rna_s1200_S21) 12s 2s 5s 5s 24.0 MB 165% 853.7 MB 2.4 MB 0 bytes 2.4 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:PICARD_COLLECTINSERTSIZEMETRICS (rna_s1200_S21) 37s 14s 18s 5s 526.2 MB 183% 886.6 MB 975.3 KB 0 bytes 984.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:PRESEQ_LCEXTRAP (rna_s1200_S21) 1m 21s 1s 1m 16s 4s 205.7 MB 100% 853.7 MB 452.8 KB 0 bytes 460.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:ARRIBA_WORKFLOW:ARRIBA (rna_s1200_S21) 1m 40s 24s 1m 1s 15s 4.4 GB 100% 5.1 GB 43.4 MB 0 bytes 43.4 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES (rna_s1200_S21) 2m 22s 23s 1m 35s 24s 34.4 GB 159% 1.8 GB 981.2 MB 0 bytes 981.2 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:STARFUSION_WORKFLOW:STARFUSION (rna_s1200_S21) 4m 12s 26s 1m 43s 2m 2s 3.0 GB 297% 4.9 GB 446.4 MB 656.5 MB 446.3 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_JUNCTIONSATURATION (rna_s1200_S21) 1m 18s 9s 1m 5s 4s 1.1 GB 155% 906.5 MB 28.0 KB 0 bytes 40.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:SAMTOOLS_VIEW_ALIGNMENT_CRAM (rna_s1200_S21) 1m 0s 2s 29s 29s 784.2 MB 208% 9.6 GB 261.9 MB 9.6 GB 261.9 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_WHOLE_BAM_SATURATION (rna_s1200_S21) 26s 20s 2s 3s 47.0 MB 22% 25.9 MB 2.8 MB 0 bytes 3.1 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:RSEQC_TO_MULTIQC (rna_s1200_S21) 3s 2s 0s 0s 12.7 MB 126% 1.2 MB 1.1 KB 0 bytes 8.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:SAMTOOLS_INDEX_ALIGNMENT_CRAM (rna_s1200_S21) 3s 1s - - 7.4 MB 101% 262.0 MB 41.9 KB 0 bytes 48.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_QC (rna_s1200_S21) 2m 16s 22s 1m 26s 27s 6.6 GB 342% 10.1 GB 699.2 MB 639.9 MB 83.4 MB 1
39 items found |
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