Clear
Retried
succeeded NFCORE_RNAFUSION:RNAFUSION:CANCER_INTRONS_TO_VCF (rna_s1200_S21) 4s 2s - - 12.9 MB 124% 1.1 MB 5.4 KB 0 bytes 16.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:CONTAMINATION_SKIPPED_LOW_READS (rna_s1200_S21) 4s 2s 0s 1s 0 bytes 179% 83.7 KB 939 bytes 0 bytes 12.0 KB 1
succeeded NFCORE_RNAFUSION:DEMUX_FROM_RUNDIR:DEMULTIPLEX:CAT_FASTQ (rna_s1200_S21) 53s 3s 0s 49s 3.9 MB 102% 1.4 GB 1.4 GB 12.0 KB 1.0 GB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:TRIM_WORKFLOW:FASTQC_FOR_FASTP (rna_s1200_S21) 1m 12s 2s 1m 6s 4s 569.7 MB 199% 1.3 GB 3.5 MB 0 bytes 3.8 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:KALLISTO_QUANT (rna_s1200_S21) 2m 14s 1s 2m 3s 10s 1.4 GB 269% 1.6 GB 19.3 MB 1.5 GB 19.4 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQ_ALIGN_STAR:STAR_ALIGNMENT (rna_s1200_S21) 5m 48s 1m 3s 3m 40s 1m 5s 35.6 GB 989% 45.3 GB 9.0 GB 9.0 GB 8.9 GB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQC (rna_s1200_S21) 1m 22s 1s 1m 15s 6s 536.0 MB 199% 1.4 GB 3.5 MB 0 bytes 3.8 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:TRIM_WORKFLOW:FASTP (rna_s1200_S21) 41s 2s 32s 7s 2.8 GB 878% 1.4 GB 1.2 GB 0 bytes 1.2 GB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:PICARD_COLLECTINSERTSIZEMETRICS (rna_s1200_S21) 35s 1s 28s 6s 423.0 MB 138% 886.6 MB 975.3 KB 0 bytes 984.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:ARRIBA_WORKFLOW:ARRIBA (rna_s1200_S21) 1m 16s 2s 1m 2s 12s 4.4 GB 100% 5.1 GB 43.4 MB 0 bytes 43.4 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQ_ALIGN_STAR:SAMTOOLS_INDEX_STAR_ALIGNMENT (rna_s1200_S21) 14s 3s 7s 4s 23.4 MB 141% 853.7 MB 2.4 MB 0 bytes 2.4 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES (rna_s1200_S21) 2m 10s 1s 1m 54s 15s 44.1 GB 160% 1.8 GB 981.2 MB 0 bytes 981.2 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_JUNCTIONANNOTATION (rna_s1200_S21) 1m 20s 14s 1m 1s 5s 135.1 MB 135% 919.7 MB 52.5 MB 0 bytes 52.5 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:ARRIBA_WORKFLOW:ARRIBA_FILTER (rna_s1200_S21) 7s 5s 1s 0s 13.8 MB 819% 38.7 MB 126.4 KB 0 bytes 144.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:STARFUSION_WORKFLOW:STARFUSION (rna_s1200_S21) 3m 6s 2s 1m 47s 1m 16s 2.9 GB 285% 4.9 GB 446.4 MB 600.8 MB 446.2 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:KALLISTO_TO_TX2GENE_QC (rna_s1200_S21) 5s 1s 1s 3s 227.5 MB 321% 44.3 MB 1.3 MB 0 bytes 1.3 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:KALLISTO_TO_MULTIQC (rna_s1200_S21) 3s 1s 0s 1s 12.6 MB 1636% 4.6 MB 3.7 KB 0 bytes 8.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:PRESEQ_LCEXTRAP (rna_s1200_S21) 2m 19s 2s 2m 12s 5s 206.0 MB 101% 853.8 MB 452.8 KB 0 bytes 460.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_BAMSTAT (rna_s1200_S21) 1m 21s 12s 1m 3s 6s 47.4 MB 123% 872.9 MB 1.3 KB 0 bytes 12.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_JUNCTIONSATURATION (rna_s1200_S21) 1m 32s 11s 1m 17s 4s 1.1 GB 124% 906.5 MB 28.0 KB 0 bytes 40.0 KB 1
39 items found |
1 2