succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_READCOUNT_ANNOTATION:ANNOTATE_VCF_READCOUNTS (HCC1395_BL) 9s 7s 0s 1s 12.6 MB 99% 3.2 MB 52.4 KB 0 bytes 60.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_READCOUNT_ANNOTATION:ANNOTATE_VCF_READCOUNTS (Sig_18_Blood) 9s 7s 0s 1s 13.0 MB 99% 3.2 MB 51.4 KB 0 bytes 60.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_READCOUNT_ANNOTATION:BAMREADCOUNT_BLOOD (HCC1395_BL) 23s 5s 9s 9s 74.7 MB 100% 3.2 GB 187.0 KB 0 bytes 196.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_READCOUNT_ANNOTATION:BAMREADCOUNT_BLOOD (Sig_18_Blood) 24s 6s 9s 9s 70.8 MB 100% 3.1 GB 187.6 KB 0 bytes 196.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_READCOUNT_ANNOTATION:BAMREADCOUNT_TUMOR (HCC1395_BL) 23s 5s 9s 9s 71.9 MB 100% 3.2 GB 187.8 KB 0 bytes 196.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_READCOUNT_ANNOTATION:BAMREADCOUNT_TUMOR (Sig_18_Blood) 24s 6s 10s 8s 73.7 MB 100% 3.1 GB 188.9 KB 0 bytes 196.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_READCOUNT_ANNOTATION:BCFTOOLS_QUERY (HCC1395_BL) 5s 4s 0s 0s 26.5 MB 6705% 171.7 KB 2.5 KB 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_READCOUNT_ANNOTATION:BCFTOOLS_QUERY (Sig_18_Blood) 8s 7s 0s 0s 32.4 MB 5608% 173.0 KB 2.4 KB 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CONTAMINATION_ANALYSIS:CONPAIR_CONTAMINATION (HCC1395_tumor_vs_HCC1395_BL) 11s 2s 6s 2s 85.7 MB 533% 26.9 MB 670 bytes 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CONTAMINATION_ANALYSIS:CONPAIR_CONTAMINATION (Sig_18_tissue_vs_Sig_18_Blood) 21s 3s 16s 1s 86.9 MB 273% 29.3 MB 670 bytes 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CONTAMINATION_ANALYSIS:CONPAIR_PILEUP (HCC1395_BL) 56s 40s 6s 9s 995.8 MB 254% 207.2 MB 1.3 MB 0 bytes 1.3 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_CONTAMINATION_ANALYSIS:CONPAIR_PILEUP (HCC1395_tumor) 1m 0s 43s 7s 9s 838.1 MB 241% 262.1 MB 2.1 MB 0 bytes 2.1 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_CONTAMINATION_ANALYSIS:CONPAIR_PILEUP (Sig_18_Blood) 59s 41s 6s 11s 807.8 MB 257% 215.3 MB 1.5 MB 0 bytes 1.5 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_CONTAMINATION_ANALYSIS:CONPAIR_PILEUP (Sig_18_tissue) 20s 2s 8s 9s 999.9 MB 221% 310.3 MB 4.4 MB 0 bytes 4.4 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_POSTDUPLICATES_QC:BAM_QC_PICARD:PICARD_COLLECTHSMETRICS (HCC1395_BL) 45s 12s 22s 11s 473.2 MB 148% 159.5 MB 3.3 MB 0 bytes 3.3 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_POSTDUPLICATES_QC:BAM_QC_PICARD:PICARD_COLLECTHSMETRICS (HCC1395_BL) 59s 13s 36s 10s 459.7 MB 135% 160.3 MB 3.3 MB 0 bytes 3.3 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_POSTDUPLICATES_QC:BAM_QC_PICARD:PICARD_COLLECTHSMETRICS (HCC1395_tumor) 58s 18s 30s 10s 577.9 MB 131% 306.9 MB 3.3 MB 0 bytes 3.3 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_POSTDUPLICATES_QC:BAM_QC_PICARD:PICARD_COLLECTHSMETRICS (HCC1395_tumor) 1m 14s 18s 46s 10s 597.8 MB 122% 307.7 MB 3.3 MB 0 bytes 3.3 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_POSTDUPLICATES_QC:BAM_QC_PICARD:PICARD_COLLECTHSMETRICS (Sig_18_Blood) 1m 1s 13s 37s 11s 510.2 MB 130% 185.8 MB 3.3 MB 0 bytes 3.3 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_POSTDUPLICATES_QC:BAM_QC_PICARD:PICARD_COLLECTHSMETRICS (Sig_18_Blood) 36s 3s 23s 10s 617.7 MB 142% 184.9 MB 3.3 MB 0 bytes 3.3 MB 1
626 items found |