|
succeeded
|
NFCORE_SAREK:SAREK:BAM_SENTIEON_DEDUP:SENTIEON_DEDUP (Sig_18_Blood)
|
38s |
2s |
24s |
11s |
302.6 MB |
481% |
4.2 GB |
362.8 MB |
0 bytes |
409.4 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_SENTIEON_DEDUP:SENTIEON_DEDUP (Sig_18_tissue)
|
1m 25s |
2s |
1m 8s |
14s |
852.1 MB |
427% |
7.8 GB |
1.7 GB |
0 bytes |
1.7 GB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_CNVKIT:CNVKIT_BATCH (HCC1395_BL)
|
1m 35s |
58s |
28s |
9s |
3.9 GB |
151% |
4.3 GB |
107.9 MB |
0 bytes |
107.8 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_CNVKIT:CNVKIT_BATCH (Sig_18_Blood)
|
1m 2s |
20s |
32s |
10s |
3.9 GB |
152% |
4.6 GB |
133.9 MB |
0 bytes |
133.8 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_GERMLINE_MANTA:MANTA_GERMLINE (HCC1395_BL)
|
48s |
5s |
34s |
9s |
275.3 MB |
141% |
3.2 GB |
3.2 MB |
0 bytes |
2.7 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_GERMLINE_MANTA:MANTA_GERMLINE (Sig_18_Blood)
|
52s |
9s |
34s |
9s |
93.2 MB |
147% |
3.0 GB |
3.2 MB |
0 bytes |
2.7 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_HAPLOTYPECALLER:GATK4_HAPLOTYPECALLER (HCC1395_BL;chr21_44120631-44120778)
|
46s |
15s |
12s |
19s |
958.9 MB |
302% |
174.9 MB |
1.1 MB |
0 bytes |
1.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_HAPLOTYPECALLER:GATK4_HAPLOTYPECALLER (HCC1395_BL;chr21_5117103-5117231)
|
59s |
2s |
38s |
19s |
1.1 GB |
251% |
270.1 MB |
1.1 MB |
0 bytes |
1.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_HAPLOTYPECALLER:GATK4_HAPLOTYPECALLER (Sig_18_Blood;chr21_44120631-44120778)
|
43s |
2s |
18s |
23s |
975.6 MB |
301% |
177.5 MB |
1.1 MB |
0 bytes |
1.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_HAPLOTYPECALLER:GATK4_HAPLOTYPECALLER (Sig_18_Blood;chr21_5117103-5117231)
|
1m 28s |
3s |
1m 4s |
21s |
1.1 GB |
243% |
281.7 MB |
1.1 MB |
0 bytes |
1.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_HAPLOTYPECALLER:MERGE_HAPLOTYPECALLER (HCC1395_BL)
|
17s |
13s |
2s |
2s |
218.8 MB |
306% |
95.8 MB |
737.1 KB |
0 bytes |
744.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_HAPLOTYPECALLER:MERGE_HAPLOTYPECALLER (Sig_18_Blood)
|
8s |
3s |
3s |
2s |
215.8 MB |
291% |
95.8 MB |
739.6 KB |
0 bytes |
744.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER:MERGE_SENTIEON_HAPLOTYPER_VCFS (HCC1395_BL)
|
6s |
2s |
2s |
2s |
219.7 MB |
314% |
95.9 MB |
734.5 KB |
0 bytes |
740.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER:MERGE_SENTIEON_HAPLOTYPER_VCFS (Sig_18_Blood)
|
7s |
2s |
3s |
2s |
218.8 MB |
306% |
95.9 MB |
737.2 KB |
0 bytes |
744.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER:SENTIEON_HAPLOTYPER (HCC1395_BL;chr21_44120631-44120778)
|
16s |
3s |
2s |
10s |
341.8 MB |
348% |
128.0 MB |
100.0 KB |
0 bytes |
2.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER:SENTIEON_HAPLOTYPER (HCC1395_BL;chr21_5117103-5117231)
|
18s |
2s |
5s |
10s |
493.8 MB |
619% |
615.6 MB |
173.3 KB |
0 bytes |
6.2 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER:SENTIEON_HAPLOTYPER (Sig_18_Blood;chr21_44120631-44120778)
|
19s |
3s |
2s |
13s |
362.0 MB |
443% |
141.8 MB |
98.2 KB |
0 bytes |
2.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER:SENTIEON_HAPLOTYPER (Sig_18_Blood;chr21_5117103-5117231)
|
26s |
2s |
10s |
13s |
633.5 MB |
707% |
660.5 MB |
181.0 KB |
0 bytes |
6.2 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SINGLE_STRELKA:MERGE_STRELKA_GENOME (HCC1395_BL)
|
17s |
13s |
4s |
0s |
219.6 MB |
340% |
96.1 MB |
1.0 MB |
0 bytes |
1.0 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SINGLE_STRELKA:MERGE_STRELKA_GENOME (Sig_18_Blood)
|
19s |
14s |
3s |
2s |
217.3 MB |
332% |
96.1 MB |
1.1 MB |
0 bytes |
1.1 MB |
1 |