|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SINGLE_STRELKA:MERGE_STRELKA (HCC1395_BL)
|
17s |
13s |
2s |
2s |
213.2 MB |
305% |
95.8 MB |
728.3 KB |
0 bytes |
736.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SINGLE_STRELKA:MERGE_STRELKA (Sig_18_Blood)
|
19s |
14s |
3s |
2s |
209.3 MB |
312% |
95.8 MB |
729.3 KB |
0 bytes |
736.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SINGLE_STRELKA:STRELKA_SINGLE (HCC1395_BL;chr21_44120631-44120778.bed)
|
32s |
4s |
19s |
9s |
78.3 MB |
37% |
123.6 MB |
2.7 MB |
0 bytes |
1.7 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SINGLE_STRELKA:STRELKA_SINGLE (HCC1395_BL;chr21_5117103-5117231.bed)
|
47s |
4s |
34s |
9s |
257.7 MB |
88% |
984.3 MB |
4.9 MB |
0 bytes |
3.0 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SINGLE_STRELKA:STRELKA_SINGLE (Sig_18_Blood;chr21_44120631-44120778.bed)
|
33s |
5s |
19s |
9s |
80.3 MB |
43% |
124.0 MB |
2.9 MB |
0 bytes |
1.8 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SINGLE_STRELKA:STRELKA_SINGLE (Sig_18_Blood;chr21_5117103-5117231.bed)
|
48s |
5s |
33s |
10s |
254.7 MB |
104% |
937.7 MB |
5.7 MB |
0 bytes |
3.4 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:SENTIEON_HAPLOTYPER_VCF_VARIANT_FILTERING_GATK:CNNSCOREVARIANTS (HCC1395_BL)
|
19s |
3s |
7s |
8s |
815.1 MB |
361% |
197.9 MB |
20.2 MB |
0 bytes |
20.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:SENTIEON_HAPLOTYPER_VCF_VARIANT_FILTERING_GATK:CNNSCOREVARIANTS (Sig_18_Blood)
|
51s |
35s |
7s |
8s |
945.4 MB |
400% |
195.9 MB |
20.2 MB |
0 bytes |
20.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:SENTIEON_HAPLOTYPER_VCF_VARIANT_FILTERING_GATK:FILTERVARIANTTRANCHES (HCC1395_BL)
|
32s |
2s |
5s |
25s |
954.2 MB |
248% |
130.7 MB |
743.3 KB |
0 bytes |
764.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:SENTIEON_HAPLOTYPER_VCF_VARIANT_FILTERING_GATK:FILTERVARIANTTRANCHES (Sig_18_Blood)
|
35s |
2s |
5s |
28s |
1.0 GB |
252% |
129.2 MB |
745.9 KB |
0 bytes |
768.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:TABIX_VCF_FOR_ENTROPY (HCC1395_BL;haplotypecaller)
|
4s |
2s |
- |
- |
3.3 MB |
150% |
141.0 KB |
5.1 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:TABIX_VCF_FOR_ENTROPY (HCC1395_BL;manta)
|
5s |
4s |
- |
- |
3.3 MB |
148% |
114.9 KB |
3.2 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:TABIX_VCF_FOR_ENTROPY (HCC1395_BL;sentieon_haplotyper)
|
3s |
2s |
- |
- |
3.3 MB |
53% |
143.7 KB |
5.1 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:TABIX_VCF_FOR_ENTROPY (HCC1395_BL;strelka)
|
4s |
3s |
- |
- |
3.2 MB |
160% |
129.6 KB |
5.0 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:TABIX_VCF_FOR_ENTROPY (Sig_18_Blood;haplotypecaller)
|
5s |
4s |
- |
- |
3.2 MB |
103% |
148.9 KB |
5.1 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:TABIX_VCF_FOR_ENTROPY (Sig_18_Blood;manta)
|
5s |
4s |
- |
- |
3.3 MB |
100% |
119.8 KB |
3.3 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:TABIX_VCF_FOR_ENTROPY (Sig_18_Blood;sentieon_haplotyper)
|
4s |
3s |
- |
- |
3.2 MB |
104% |
146.8 KB |
5.1 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:TABIX_VCF_FOR_ENTROPY (Sig_18_Blood;strelka)
|
4s |
2s |
- |
- |
3.3 MB |
104% |
136.8 KB |
5.0 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:VCF_ANNOTATE_INDEL_ENTROPY:BCFTOOLS_QUERY (HCC1395_BL)
|
5s |
4s |
0s |
0s |
27.3 MB |
6537% |
173.0 KB |
1.2 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:VCF_ANNOTATE_INDEL_ENTROPY:BCFTOOLS_QUERY (HCC1395_BL)
|
8s |
6s |
0s |
1s |
20.3 MB |
2180% |
140.0 KB |
716 bytes |
0 bytes |
4.0 KB |
1 |