succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_READCOUNT_ANNOTATION:ANNOTATE_VCF_READCOUNTS (HCC1395_BL) 9s 8s 0s 0s 12.0 MB 101% 3.2 MB 52.3 KB 0 bytes 60.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_READCOUNT_ANNOTATION:ANNOTATE_VCF_READCOUNTS (Sig_18_Blood) 9s 8s 0s 0s 12.1 MB 101% 3.2 MB 51.1 KB 0 bytes 60.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_READCOUNT_ANNOTATION:BAMREADCOUNT_BLOOD (HCC1395_BL) 23s 5s 9s 9s 74.8 MB 100% 3.2 GB 187.0 KB 0 bytes 196.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_READCOUNT_ANNOTATION:BAMREADCOUNT_BLOOD (Sig_18_Blood) 24s 4s 9s 11s 70.7 MB 100% 3.1 GB 187.6 KB 0 bytes 204.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_READCOUNT_ANNOTATION:BAMREADCOUNT_TUMOR (HCC1395_BL) 23s 5s 9s 9s 72.1 MB 100% 3.2 GB 187.8 KB 0 bytes 196.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_READCOUNT_ANNOTATION:BAMREADCOUNT_TUMOR (Sig_18_Blood) 24s 5s 10s 9s 73.6 MB 100% 3.1 GB 188.9 KB 0 bytes 200.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_READCOUNT_ANNOTATION:BCFTOOLS_QUERY (HCC1395_BL) 4s 3s 0s 0s 12.1 MB 689% 164.1 KB 2.4 KB 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_READCOUNT_ANNOTATION:BCFTOOLS_QUERY (Sig_18_Blood) 5s 3s 0s 1s 3.5 MB 533% 164.1 KB 2.4 KB 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CONTAMINATION_ANALYSIS:CONPAIR_CONTAMINATION (HCC1395_tumor_vs_HCC1395_BL) 11s 3s 6s 1s 85.3 MB 183% 26.8 MB 673 bytes 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CONTAMINATION_ANALYSIS:CONPAIR_CONTAMINATION (Sig_18_tissue_vs_Sig_18_Blood) 56s 37s 16s 2s 86.3 MB 129% 29.3 MB 671 bytes 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CONTAMINATION_ANALYSIS:CONPAIR_PILEUP (HCC1395_BL) 53s 37s 6s 9s 744.9 MB 242% 207.2 MB 1.3 MB 0 bytes 1.3 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_CONTAMINATION_ANALYSIS:CONPAIR_PILEUP (HCC1395_tumor) 19s 2s 7s 9s 785.2 MB 235% 262.1 MB 2.1 MB 0 bytes 2.1 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_CONTAMINATION_ANALYSIS:CONPAIR_PILEUP (Sig_18_Blood) 22s 2s 7s 12s 1.1 GB 242% 215.3 MB 1.5 MB 4.0 KB 1.5 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_CONTAMINATION_ANALYSIS:CONPAIR_PILEUP (Sig_18_tissue) 23s 2s 8s 12s 675.8 MB 201% 310.3 MB 4.4 MB 0 bytes 4.4 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_POSTDUPLICATES_QC:BAM_QC_PICARD:PICARD_COLLECTHSMETRICS (HCC1395_BL) 51s 15s 24s 12s 463.1 MB 152% 159.5 MB 3.3 MB 0 bytes 3.3 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_POSTDUPLICATES_QC:BAM_QC_PICARD:PICARD_COLLECTHSMETRICS (HCC1395_BL) 58s 15s 32s 11s 461.7 MB 136% 160.3 MB 3.3 MB 0 bytes 3.3 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_POSTDUPLICATES_QC:BAM_QC_PICARD:PICARD_COLLECTHSMETRICS (HCC1395_tumor) 57s 14s 31s 12s 405.5 MB 135% 306.9 MB 3.3 MB 0 bytes 3.3 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_POSTDUPLICATES_QC:BAM_QC_PICARD:PICARD_COLLECTHSMETRICS (HCC1395_tumor) 1m 25s 22s 51s 12s 507.0 MB 124% 307.9 MB 3.3 MB 0 bytes 3.3 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_POSTDUPLICATES_QC:BAM_QC_PICARD:PICARD_COLLECTHSMETRICS (Sig_18_Blood) 1m 2s 13s 37s 12s 470.1 MB 131% 185.8 MB 3.3 MB 0 bytes 3.3 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_POSTDUPLICATES_QC:BAM_QC_PICARD:PICARD_COLLECTHSMETRICS (Sig_18_Blood) 48s 13s 24s 11s 437.3 MB 146% 184.9 MB 3.3 MB 0 bytes 3.3 MB 1
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