|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SINGLE_STRELKA:STRELKA_SINGLE (Sig_18_Blood;chr21_44120631-44120778.bed)
|
26s |
5s |
12s |
9s |
68.0 MB |
62% |
3.1 GB |
3.0 GB |
37.3 MB |
3.0 GB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SINGLE_STRELKA:STRELKA_SINGLE (Sig_18_Blood;chr21_5117103-5117231.bed)
|
51s |
6s |
34s |
11s |
206.4 MB |
71% |
3.3 GB |
3.0 GB |
158.6 MB |
3.0 GB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BGZIPTABIX_GERMLINE_CNV (HCC1395_BL;null)
|
17s |
16s |
- |
- |
3.2 MB |
113% |
128.4 KB |
5.3 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BGZIPTABIX_GERMLINE_CNV (Sig_18_Blood;null)
|
3s |
2s |
- |
- |
3.3 MB |
114% |
128.4 KB |
5.3 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:GERMLINE_CNV (HCC1395_BL)
|
32s |
7s |
15s |
9s |
434.8 MB |
182% |
3.2 GB |
187.7 KB |
0 bytes |
196.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:GERMLINE_CNV (Sig_18_Blood)
|
31s |
7s |
15s |
8s |
443.7 MB |
183% |
3.2 GB |
187.7 KB |
0 bytes |
196.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX_NORMAL (HCC1395_BL)
|
6s |
3s |
- |
- |
3.2 MB |
129% |
2.2 MB |
108.4 KB |
0 bytes |
112.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX_NORMAL (Sig_18_Blood)
|
8s |
5s |
- |
- |
3.1 MB |
130% |
2.2 MB |
108.4 KB |
0 bytes |
112.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX_TUMOR (HCC1395_tumor)
|
8s |
6s |
- |
- |
3.3 MB |
127% |
2.3 MB |
108.4 KB |
0 bytes |
116.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX_TUMOR (Sig_18_tissue)
|
12s |
6s |
- |
- |
3.2 MB |
111% |
2.6 MB |
108.5 KB |
0 bytes |
116.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_CNVKIT:CNVKIT_BATCH (custom_Sig_18_tumor_normal)
|
1m 41s |
16s |
1m 16s |
9s |
2.1 GB |
154% |
9.5 GB |
6.0 MB |
0 bytes |
5.7 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_CNVKIT:CNVKIT_BATCH (HCC1395_tumor_vs_HCC1395_BL)
|
54s |
2s |
42s |
10s |
2.1 GB |
193% |
6.5 GB |
5.6 MB |
0 bytes |
5.4 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_CNVKIT:CNVKIT_CALL (custom_Sig_18_tumor_normal)
|
5s |
1s |
3s |
1s |
159.1 MB |
1131% |
75.3 MB |
68.3 KB |
0 bytes |
84.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_CNVKIT:CNVKIT_CALL (HCC1395_tumor_vs_HCC1395_BL)
|
7s |
3s |
3s |
1s |
147.6 MB |
1060% |
75.3 MB |
68.4 KB |
0 bytes |
84.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_CNVKIT:CNVKIT_EXPORT (custom_Sig_18_tumor_normal)
|
5s |
1s |
3s |
1s |
163.0 MB |
1125% |
75.3 MB |
69.3 KB |
0 bytes |
84.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_CNVKIT:CNVKIT_EXPORT (HCC1395_tumor_vs_HCC1395_BL)
|
8s |
4s |
3s |
1s |
160.9 MB |
1116% |
75.3 MB |
69.7 KB |
0 bytes |
84.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_CNVKIT:CNVKIT_GENEMETRICS (custom_Sig_18_tumor_normal)
|
6s |
2s |
2s |
2s |
158.6 MB |
1126% |
75.5 MB |
68.0 KB |
0 bytes |
84.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_CNVKIT:CNVKIT_GENEMETRICS (HCC1395_tumor_vs_HCC1395_BL)
|
7s |
3s |
3s |
1s |
140.7 MB |
1045% |
75.5 MB |
68.0 KB |
0 bytes |
84.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_ASCAT:ASCAT (custom_Sig_18_tumor_normal)
|
1m 16s |
19s |
44s |
13s |
1.9 GB |
197% |
988.2 MB |
111.8 MB |
0 bytes |
111.9 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_ASCAT:ASCAT (HCC1395_tumor_vs_HCC1395_BL)
|
55s |
15s |
27s |
13s |
1.4 GB |
270% |
611.3 MB |
111.9 MB |
0 bytes |
112.0 MB |
1 |