Clear
Retried
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:SENTIEON_HAPLOTYPER_RF_FILTER (HCC1395_BL) 13s 6s 3s 3s 1.6 GB 763% 81.2 MB 53.5 KB 0 bytes 64.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:HARMONIZE_GERMLINE:BCFTOOLS_NORM (HCC1395_BL) 21s 3s 8s 9s 29.2 MB 227% 3.0 GB 198.3 KB 0 bytes 208.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:SENTIEON_GENOTYPE (HCC1395_BL) 19s 8s 0s 10s 3.5 MB 122% 923.7 KB 672.0 KB 0 bytes 32.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:SPLIT_MULTIALLELIC (HCC1395_BL) 37s 17s 8s 11s 29.3 MB 224% 3.0 GB 194.9 KB 0 bytes 204.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SINGLE_STRELKA:MERGE_STRELKA_GENOME (HCC1395_BL) 36s 30s 3s 3s 274.8 MB 422% 96.1 MB 1.0 MB 0 bytes 1.0 MB 1
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLE_INTEGRITY:CRAM_QC_RECAL:SAMTOOLS_STATS (HCC1395_BL) 15s 2s 3s 10s 8.8 MB 138% 155.6 MB 125.8 KB 0 bytes 128.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_GERMLINE_MANTA:MANTA_GERMLINE (HCC1395_BL) 33s 3s 21s 9s 59.1 MB 94% 4.4 GB 3.0 GB 276.4 MB 3.0 GB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX_NORMAL (HCC1395_BL) 7s 4s - - 3.1 MB 109% 2.2 MB 108.4 KB 0 bytes 112.0 KB 1
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLE_INTEGRITY:CRAM_QC_RECAL:MOSDEPTH (HCC1395_BL) 41s 4s 27s 10s 1.9 GB 107% 167.1 MB 6.1 MB 155.4 MB 6.2 MB 1
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLE_INTEGRITY:BAM_CONTAMINATION_ANALYSIS:CONPAIR_PILEUP (HCC1395_BL) 17s 4s 3s 9s 502.7 MB 354% 147.5 MB 1.3 MB 0 bytes 1.4 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:GERMLINE_CNV (HCC1395_BL) 28s 2s 16s 9s 487.5 MB 181% 3.2 GB 187.7 KB 0 bytes 196.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_CNVKIT:CNVKIT_BATCH (HCC1395_BL) 43s 4s 28s 11s 4.3 GB 260% 1.1 GB 69.7 MB 0 bytes 52.0 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BAM_VARIANT_CALLING_TUMOR_ONLY_TNSEQ:SENTIEON_TNHAPLOTYPER2 (HCC1395_BL) 43s 3s 3s 36s 394.8 MB 772% 678.1 MB 366.8 KB 0 bytes 8.0 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SINGLE_STRELKA:MERGE_STRELKA (HCC1395_BL) 21s 16s 3s 2s 255.6 MB 365% 95.8 MB 728.4 KB 0 bytes 740.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_CNVKIT:CNVKIT_CALL (HCC1395_BL) 7s 3s 2s 2s 141.1 MB 1029% 75.3 MB 69.5 KB 0 bytes 84.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_CNVKIT:CNVKIT_GENEMETRICS (HCC1395_BL) 10s 5s 3s 2s 247.8 MB 820% 85.7 MB 67.8 KB 0 bytes 84.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER:MERGE_SENTIEON_HAPLOTYPER_VCFS (HCC1395_BL) 9s 3s 4s 2s 228.7 MB 361% 95.9 MB 734.7 KB 0 bytes 740.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:DIFF_DV_SENTIEON (HCC1395_BL) 26s 24s 0s 1s 19.8 MB 4527% 8.3 MB 18.1 KB 0 bytes 28.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BAM_VARIANT_CALLING_TUMOR_ONLY_TNSEQ:SENTIEON_TNFILTER (HCC1395_BL) 17s 4s 3s 9s 905.0 MB 8727% 10.4 MB 402.7 KB 0 bytes 25.4 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_CNVKIT:CNVKIT_EXPORT (HCC1395_BL) 20s 16s 3s 1s 155.4 MB 1087% 75.3 MB 73.2 KB 0 bytes 88.0 KB 1
34 items found |
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